RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 RBM42Q9BTD8 480 aaKnown RBP27.01■■□□□ 1.91
SMG8-204ENST00000580498 FHDC1Q9C0D6 1143 aaPredicted RBP27■■□□□ 1.91
SMG8-204ENST00000580498 KDM6AO15550 1401 aaPredicted RBP26.99■■□□□ 1.91
SMG8-204ENST00000580498 COL23A1Q86Y22 540 aaPredicted RBP26.99■■□□□ 1.91
SMG8-204ENST00000580498 SGIP1Q9BQI5 828 aa26.99■■□□□ 1.91
SMG8-204ENST00000580498 KLHL34Q8N239 644 aa26.98■■□□□ 1.91
SMG8-204ENST00000580498 SSFA2P28290 1259 aa26.97■■□□□ 1.91
SMG8-204ENST00000580498 PHF14O94880 888 aa26.96■■□□□ 1.91
SMG8-204ENST00000580498 NFATC2IPQ8NCF5 419 aa26.96■■□□□ 1.91
SMG8-204ENST00000580498 GAS2L2Q8NHY3 880 aa26.96■■□□□ 1.91
SMG8-204ENST00000580498 SYT17Q9BSW7 474 aa26.96■■□□□ 1.91
SMG8-204ENST00000580498 SCN11AQ9UI33 1791 aa26.96■■□□□ 1.91
SMG8-204ENST00000580498 COL3A1P02461 1466 aaPredicted RBP26.94■■□□□ 1.9
SMG8-204ENST00000580498 GNPATO15228 680 aa26.94■■□□□ 1.9
SMG8-204ENST00000580498 PPP2R1AP30153 589 aa26.94■■□□□ 1.9
SMG8-204ENST00000580498 LINC00116Q8NCU8 138 aa26.94■■□□□ 1.9
SMG8-204ENST00000580498 MAP3K5Q99683 1374 aa26.94■■□□□ 1.9
SMG8-204ENST00000580498 ZNF831Q5JPB2 1677 aa26.93■■□□□ 1.9
SMG8-204ENST00000580498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.93■■□□□ 1.9
SMG8-204ENST00000580498 MTHFSDQ2M296 383 aaKnown RBP26.92■■□□□ 1.9
SMG8-204ENST00000580498 SLC52A2Q9HAB3 445 aa26.92■■□□□ 1.9
SMG8-204ENST00000580498 RTCBQ9Y3I0 505 aaKnown RBP26.92■■□□□ 1.9
SMG8-204ENST00000580498 RNMTO43148 476 aaKnown RBP26.91■■□□□ 1.9
SMG8-204ENST00000580498 NEFMP07197 916 aa26.91■■□□□ 1.9
SMG8-204ENST00000580498 ITPK1Q13572 414 aa26.91■■□□□ 1.9
SMG8-204ENST00000580498 UBR3Q6ZT12 1888 aa26.91■■□□□ 1.9
SMG8-204ENST00000580498 COL24A1Q17RW2 1714 aa26.9■■□□□ 1.9
SMG8-204ENST00000580498 PTCD1O75127 700 aaKnown RBP26.9■■□□□ 1.9
SMG8-204ENST00000580498 U2AF1L5P0DN76 240 aaPredicted RBP26.89■■□□□ 1.9
SMG8-204ENST00000580498 U2AF1Q01081 240 aaKnown RBP eCLIP26.89■■□□□ 1.9
SMG8-204ENST00000580498 RC3H1Q5TC82 1133 aaKnown RBP26.89■■□□□ 1.9
SMG8-204ENST00000580498 MSL1Q68DK7 614 aa26.89■■□□□ 1.9
SMG8-204ENST00000580498 ADRA2BP18089 450 aa26.88■■□□□ 1.89
SMG8-204ENST00000580498 TRAPPC3LQ5T215 181 aa26.88■■□□□ 1.89
SMG8-204ENST00000580498 CNTNAP4Q9C0A0 1308 aa26.88■■□□□ 1.89
SMG8-204ENST00000580498 GNAT3A8MTJ3 354 aa26.87■■□□□ 1.89
SMG8-204ENST00000580498 TEFQ10587 303 aa26.87■■□□□ 1.89
SMG8-204ENST00000580498 VIRMAQ69YN4 1812 aaKnown RBP26.86■■□□□ 1.89
SMG8-204ENST00000580498 LGR6Q9HBX8 967 aa26.86■■□□□ 1.89
SMG8-204ENST00000580498 PRKAR2BP31323 418 aa26.85■■□□□ 1.89
SMG8-204ENST00000580498 TTC5Q8N0Z6 440 aa26.85■■□□□ 1.89
SMG8-204ENST00000580498 MRC1P22897 1456 aa26.84■■□□□ 1.89
SMG8-204ENST00000580498 FCHSD2O94868 740 aa26.83■■□□□ 1.89
SMG8-204ENST00000580498 RFC4P35249 363 aa26.83■■□□□ 1.89
SMG8-204ENST00000580498 COL5A3P25940 1745 aaPredicted RBP26.82■■□□□ 1.88
SMG8-204ENST00000580498 GPR162Q16538 588 aa26.82■■□□□ 1.88
SMG8-204ENST00000580498 RTF1Q92541 710 aaKnown RBP26.82■■□□□ 1.88
SMG8-204ENST00000580498 RPS6KA4O75676 772 aa26.81■■□□□ 1.88
SMG8-204ENST00000580498 YY1P25490 414 aa26.81■■□□□ 1.88
SMG8-204ENST00000580498 RSPH6AQ9H0K4 717 aa26.81■■□□□ 1.88
SMG8-204ENST00000580498 PNNQ9H307 717 aaKnown RBP26.81■■□□□ 1.88
SMG8-204ENST00000580498 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
SMG8-204ENST00000580498 RALBP1Q15311 655 aa26.8■■□□□ 1.88
SMG8-204ENST00000580498 SLC4A9Q96Q91 983 aa26.8■■□□□ 1.88
SMG8-204ENST00000580498 CD2APQ9Y5K6 639 aa26.8■■□□□ 1.88
SMG8-204ENST00000580498 PELP1Q8IZL8 1130 aaKnown RBP26.79■■□□□ 1.88
SMG8-204ENST00000580498 NLGN1Q8N2Q7 840 aa26.79■■□□□ 1.88
SMG8-204ENST00000580498 CRKLP46109 303 aaKnown RBP26.78■■□□□ 1.88
SMG8-204ENST00000580498 ADAMTS7Q9UKP4 1686 aa26.78■■□□□ 1.88
SMG8-204ENST00000580498 VSIG10Q8N0Z9 540 aa26.77■■□□□ 1.88
SMG8-204ENST00000580498 CICQ96RK0 1608 aaPredicted RBP26.76■■□□□ 1.87
SMG8-204ENST00000580498 SLC39A6Q13433 755 aa26.76■■□□□ 1.87
SMG8-204ENST00000580498 AMIGO3Q86WK7 504 aa26.76■■□□□ 1.87
SMG8-204ENST00000580498 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
SMG8-204ENST00000580498 ARHGEF1Q92888 912 aaKnown RBP26.75■■□□□ 1.87
SMG8-204ENST00000580498 SMIM5Q71RC9 77 aa26.74■■□□□ 1.87
SMG8-204ENST00000580498 CCDC87Q9NVE4 849 aa26.74■■□□□ 1.87
SMG8-204ENST00000580498 STARD3NLO95772 234 aa26.73■■□□□ 1.87
SMG8-204ENST00000580498 DNAJC10Q8IXB1 793 aa26.73■■□□□ 1.87
SMG8-204ENST00000580498 PHACTR3Q96KR7 559 aa26.73■■□□□ 1.87
SMG8-204ENST00000580498 TEX13AQ9BXU3 409 aaPredicted RBP26.73■■□□□ 1.87
SMG8-204ENST00000580498 TJP1Q07157 1748 aa26.73■■□□□ 1.87
SMG8-204ENST00000580498 NPM2Q86SE8 214 aaKnown RBP26.72■■□□□ 1.87
SMG8-204ENST00000580498 MAPK8IP3Q9UPT6 1336 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 HTATSF1O43719 755 aaKnown RBP26.71■■□□□ 1.87
SMG8-204ENST00000580498 GRIN3BO60391 1043 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 ZPR1O75312 459 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 MMP10P09238 476 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 IL17REQ8NFR9 667 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 NLGN2Q8NFZ4 835 aa26.71■■□□□ 1.87
SMG8-204ENST00000580498 MYH14Q7Z406 1995 aaKnown RBP26.7■■□□□ 1.86
SMG8-204ENST00000580498 ZNF790Q6PG37 636 aa26.7■■□□□ 1.86
SMG8-204ENST00000580498 PARP3Q9Y6F1 533 aa26.7■■□□□ 1.86
SMG8-204ENST00000580498 BTBD11A6QL63 1104 aa26.69■■□□□ 1.86
SMG8-204ENST00000580498 FMNL2Q96PY5 1086 aa26.69■■□□□ 1.86
SMG8-204ENST00000580498 KCPQ6ZWJ8 1503 aa26.69■■□□□ 1.86
SMG8-204ENST00000580498 CHD4Q14839 1912 aa26.69■■□□□ 1.86
SMG8-204ENST00000580498 CEMIPQ8WUJ3 1361 aa26.68■■□□□ 1.86
SMG8-204ENST00000580498 CYP19A1P11511 503 aaPredicted RBP26.67■■□□□ 1.86
SMG8-204ENST00000580498 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
SMG8-204ENST00000580498 GYS1P13807 737 aa26.66■■□□□ 1.86
SMG8-204ENST00000580498 INTS5Q6P9B9 1019 aaKnown RBP26.66■■□□□ 1.86
SMG8-204ENST00000580498 C4AP0C0L4 1744 aa26.65■■□□□ 1.86
SMG8-204ENST00000580498 HEG1Q9ULI3 1381 aa26.65■■□□□ 1.86
SMG8-204ENST00000580498 MYBBP1AQ9BQG0 1328 aaKnown RBP26.65■■□□□ 1.86
SMG8-204ENST00000580498 USP42Q9H9J4 1324 aaKnown RBP26.65■■□□□ 1.86
SMG8-204ENST00000580498 SIPA1L3O60292 1781 aaPredicted RBP26.64■■□□□ 1.86
SMG8-204ENST00000580498 A0A087WZG4 1122 aa26.64■■□□□ 1.86
SMG8-204ENST00000580498 SOS1Q07889 1333 aaPredicted RBP26.64■■□□□ 1.85
SMG8-204ENST00000580498 ZNF496Q96IT1 587 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms