RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 IGHDP01880 384 aa18.88■□□□□ 0.61
CDK5RAP3-218ENST00000580391 KCNQ3O43525 872 aa18.88■□□□□ 0.61
CDK5RAP3-218ENST00000580391 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-218ENST00000580391 API5Q9BZZ5 524 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-218ENST00000580391 MRC1P22897 1456 aa18.87■□□□□ 0.61
CDK5RAP3-218ENST00000580391 BTBD11A6QL63 1104 aa18.87■□□□□ 0.61
CDK5RAP3-218ENST00000580391 CYP27B1O15528 508 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 PIP4K2BP78356 416 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 N4BP2Q86UW6 1770 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 CARD10Q9BWT7 1032 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 C5P01031 1676 aa18.86■□□□□ 0.61
CDK5RAP3-218ENST00000580391 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-218ENST00000580391 TOM1O60784 492 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 G2E3Q7L622 706 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 BTG4Q9NY30 223 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 NRAPQ86VF7 1730 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 PTPRCP08575 1304 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 EVA1CP58658 441 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
CDK5RAP3-218ENST00000580391 CCDC30Q5VVM6 783 aa18.83■□□□□ 0.61
CDK5RAP3-218ENST00000580391 STK31Q9BXU1 1019 aa18.83■□□□□ 0.61
CDK5RAP3-218ENST00000580391 HDGFL1Q5TGJ6 251 aa18.82■□□□□ 0.6
CDK5RAP3-218ENST00000580391 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
CDK5RAP3-218ENST00000580391 TOGARAM1Q9Y4F4 1720 aa18.81■□□□□ 0.6
CDK5RAP3-218ENST00000580391 IL2RBP14784 551 aa18.81■□□□□ 0.6
CDK5RAP3-218ENST00000580391 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 USP35Q9P2H5 1018 aa18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
CDK5RAP3-218ENST00000580391 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
CDK5RAP3-218ENST00000580391 HOXB7P09629 217 aa18.79■□□□□ 0.6
CDK5RAP3-218ENST00000580391 GLI3P10071 1580 aa18.79■□□□□ 0.6
CDK5RAP3-218ENST00000580391 INTS3Q68E01 1043 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-218ENST00000580391 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-218ENST00000580391 EIF2S2P20042 333 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-218ENST00000580391 FLIIQ13045 1269 aa18.78■□□□□ 0.6
CDK5RAP3-218ENST00000580391 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
CDK5RAP3-218ENST00000580391 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
CDK5RAP3-218ENST00000580391 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
CDK5RAP3-218ENST00000580391 C1orf115Q9H7X2 142 aa18.77■□□□□ 0.6
CDK5RAP3-218ENST00000580391 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 DISP2A7MBM2 1401 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 F6X3S4 739 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ADAMTS2O95450 1211 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 UBR2Q8IWV8 1755 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.59
CDK5RAP3-218ENST00000580391 PRAMEF22A3QJZ6 481 aa18.76■□□□□ 0.59
CDK5RAP3-218ENST00000580391 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ZNF790Q6PG37 636 aa18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 CHPF2Q9P2E5 772 aa18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-218ENST00000580391 RGS3P49796 1198 aa18.74■□□□□ 0.59
CDK5RAP3-218ENST00000580391 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-218ENST00000580391 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ITGB4P16144 1822 aa18.74■□□□□ 0.59
CDK5RAP3-218ENST00000580391 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 SLC4A10Q6U841 1118 aa18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ANXA1P04083 346 aa18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 CABP4P57796 275 aa18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-218ENST00000580391 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
CDK5RAP3-218ENST00000580391 MEIS3Q99687 375 aa18.71■□□□□ 0.59
CDK5RAP3-218ENST00000580391 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
CDK5RAP3-218ENST00000580391 ZNF496Q96IT1 587 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-218ENST00000580391 CCT4P50991 539 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-218ENST00000580391 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
CDK5RAP3-218ENST00000580391 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
CDK5RAP3-218ENST00000580391 SLIT2O94813 1529 aa18.69■□□□□ 0.58
CDK5RAP3-218ENST00000580391 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
CDK5RAP3-218ENST00000580391 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
CDK5RAP3-218ENST00000580391 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
CDK5RAP3-218ENST00000580391 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
CDK5RAP3-218ENST00000580391 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-218ENST00000580391 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
CDK5RAP3-218ENST00000580391 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
CDK5RAP3-218ENST00000580391 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
CDK5RAP3-218ENST00000580391 ERVV-2B6SEH9 535 aa18.67■□□□□ 0.58
CDK5RAP3-218ENST00000580391 LRP6O75581 1613 aa18.67■□□□□ 0.58
CDK5RAP3-218ENST00000580391 ADCY9O60503 1353 aa18.66■□□□□ 0.58
CDK5RAP3-218ENST00000580391 JCADQ9P266 1359 aa18.66■□□□□ 0.58
CDK5RAP3-218ENST00000580391 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
CDK5RAP3-218ENST00000580391 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
CDK5RAP3-218ENST00000580391 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
CDK5RAP3-218ENST00000580391 PDE4AP27815 886 aa18.64■□□□□ 0.58
CDK5RAP3-218ENST00000580391 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms