RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 COL17A1Q9UMD9 1497 aaPredicted RBP6.79□□□□□ -1.32
KPNB1-208ENST00000580019 ZC3H4Q9UPT8 1303 aaKnown RBP6.78□□□□□ -1.32
KPNB1-208ENST00000580019 A0A1W2PRU2 124 aa6.78□□□□□ -1.32
KPNB1-208ENST00000580019 PTK2Q05397 1052 aa6.78□□□□□ -1.32
KPNB1-208ENST00000580019 SPDYE3A6NKU9 549 aa6.77□□□□□ -1.33
KPNB1-208ENST00000580019 NEURL1BA8MQ27 555 aa6.77□□□□□ -1.33
KPNB1-208ENST00000580019 WASLO00401 505 aaPredicted RBP6.77□□□□□ -1.33
KPNB1-208ENST00000580019 FGFR3P22607 806 aa6.77□□□□□ -1.33
KPNB1-208ENST00000580019 ADAM32Q8TC27 787 aa6.77□□□□□ -1.33
KPNB1-208ENST00000580019 GPAMQ9HCL2 828 aa6.77□□□□□ -1.33
KPNB1-208ENST00000580019 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
KPNB1-208ENST00000580019 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
KPNB1-208ENST00000580019 UBAP2LQ14157 1087 aaKnown RBP6.76□□□□□ -1.33
KPNB1-208ENST00000580019 PRRT3Q5FWE3 981 aa6.76□□□□□ -1.33
KPNB1-208ENST00000580019 RTN4Q9NQC3 1192 aaKnown RBP6.76□□□□□ -1.33
KPNB1-208ENST00000580019 GPSM3Q9Y4H4 160 aa6.76□□□□□ -1.33
KPNB1-208ENST00000580019 ESPNB1AK53 854 aa6.75□□□□□ -1.33
KPNB1-208ENST00000580019 CTBSQ01459 385 aa6.75□□□□□ -1.33
KPNB1-208ENST00000580019 QPCTQ16769 361 aa6.75□□□□□ -1.33
KPNB1-208ENST00000580019 OCSTAMPQ9BR26 566 aa6.75□□□□□ -1.33
KPNB1-208ENST00000580019 TULP1O00294 542 aaPredicted RBP6.74□□□□□ -1.33
KPNB1-208ENST00000580019 LILRB3O75022 631 aa6.74□□□□□ -1.33
KPNB1-208ENST00000580019 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
KPNB1-208ENST00000580019 ABHD17AQ96GS6 310 aa6.74□□□□□ -1.33
KPNB1-208ENST00000580019 CSB-PGBD3P0DP91 1061 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 ELNP15502 786 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 PPP2R2DQ66LE6 453 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 DZIP3Q86Y13 1208 aaKnown RBP6.73□□□□□ -1.33
KPNB1-208ENST00000580019 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 NACC1Q96RE7 527 aa6.73□□□□□ -1.33
KPNB1-208ENST00000580019 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
KPNB1-208ENST00000580019 CLN3Q13286 438 aa6.72□□□□□ -1.33
KPNB1-208ENST00000580019 AMHR2Q16671 573 aa6.72□□□□□ -1.33
KPNB1-208ENST00000580019 EFHC2Q5JST6 749 aa6.72□□□□□ -1.33
KPNB1-208ENST00000580019 ADH6P28332 368 aa6.71□□□□□ -1.34
KPNB1-208ENST00000580019 LAMC2Q13753 1193 aa6.71□□□□□ -1.34
KPNB1-208ENST00000580019 NDFIP2Q9NV92 336 aa6.71□□□□□ -1.34
KPNB1-208ENST00000580019 BNIP3LO60238 219 aa6.7□□□□□ -1.34
KPNB1-208ENST00000580019 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
KPNB1-208ENST00000580019 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
KPNB1-208ENST00000580019 RUBCNLQ9H714 662 aa6.69□□□□□ -1.34
KPNB1-208ENST00000580019 CYP2U1Q7Z449 544 aa6.67□□□□□ -1.34
KPNB1-208ENST00000580019 FCHSD1Q86WN1 690 aa6.67□□□□□ -1.34
KPNB1-208ENST00000580019 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
KPNB1-208ENST00000580019 PHKA2P46019 1235 aa6.66□□□□□ -1.34
KPNB1-208ENST00000580019 CTDSPL2Q05D32 466 aa6.66□□□□□ -1.34
KPNB1-208ENST00000580019 CC2D2BQ6DHV5 1058 aa6.65□□□□□ -1.34
KPNB1-208ENST00000580019 KLF15Q9UIH9 416 aa6.65□□□□□ -1.34
KPNB1-208ENST00000580019 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
KPNB1-208ENST00000580019 MSX1P28360 303 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 IRAK1P51617 712 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 ERVK-9P63128 1117 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 TRIM28Q13263 835 aaKnown RBP6.64□□□□□ -1.35
KPNB1-208ENST00000580019 NR6A1Q15406 480 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 MYSM1Q5VVJ2 828 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 FIGNL1Q6PIW4 674 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 CCDC125Q86Z20 511 aa6.64□□□□□ -1.35
KPNB1-208ENST00000580019 LRRN4Q8WUT4 740 aa6.63□□□□□ -1.35
KPNB1-208ENST00000580019 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
KPNB1-208ENST00000580019 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
KPNB1-208ENST00000580019 C9orf172C9J069 976 aa6.62□□□□□ -1.35
KPNB1-208ENST00000580019 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
KPNB1-208ENST00000580019 GNASQ5JWF2 1037 aa6.62□□□□□ -1.35
KPNB1-208ENST00000580019 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
KPNB1-208ENST00000580019 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
KPNB1-208ENST00000580019 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
KPNB1-208ENST00000580019 FAM182BQ5T319 152 aa6.61□□□□□ -1.35
KPNB1-208ENST00000580019 CRISPLD1Q9H336 500 aa6.61□□□□□ -1.35
KPNB1-208ENST00000580019 PCMTD2Q9NV79 361 aa6.61□□□□□ -1.35
KPNB1-208ENST00000580019 CENPCQ03188 943 aa6.6□□□□□ -1.35
KPNB1-208ENST00000580019 ADGRE1Q14246 886 aa6.6□□□□□ -1.35
KPNB1-208ENST00000580019 GRIK4Q16099 956 aa6.6□□□□□ -1.35
KPNB1-208ENST00000580019 ZSCAN10Q96SZ4 725 aaPredicted RBP6.6□□□□□ -1.35
KPNB1-208ENST00000580019 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
KPNB1-208ENST00000580019 ALAS2P22557 587 aa6.59□□□□□ -1.35
KPNB1-208ENST00000580019 TXNRD3Q86VQ6 643 aa6.59□□□□□ -1.35
KPNB1-208ENST00000580019 PARP9Q8IXQ6 854 aa6.59□□□□□ -1.35
KPNB1-208ENST00000580019 TP53INP1Q96A56 240 aa6.59□□□□□ -1.35
KPNB1-208ENST00000580019 ESYT1Q9BSJ8 1104 aa6.59□□□□□ -1.35
KPNB1-208ENST00000580019 ZCCHC2Q9C0B9 1178 aaKnown RBP6.59□□□□□ -1.35
KPNB1-208ENST00000580019 ELOA3CA0A087WX78 387 aaPredicted RBP6.58□□□□□ -1.36
KPNB1-208ENST00000580019 ELOA3DA6NLF2 546 aaPredicted RBP6.58□□□□□ -1.36
KPNB1-208ENST00000580019 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
KPNB1-208ENST00000580019 TAL1P17542 331 aaPredicted RBP6.58□□□□□ -1.36
KPNB1-208ENST00000580019 MBTPS1Q14703 1052 aa6.58□□□□□ -1.36
KPNB1-208ENST00000580019 ELOA3BQ3SY89 546 aa6.58□□□□□ -1.36
KPNB1-208ENST00000580019 C4orf17Q53FE4 359 aa6.58□□□□□ -1.36
KPNB1-208ENST00000580019 ELOA3Q8NG57 546 aa6.58□□□□□ -1.36
KPNB1-208ENST00000580019 CNKSR1Q969H4 720 aa6.58□□□□□ -1.36
KPNB1-208ENST00000580019 PCBP4P57723 403 aaKnown RBP6.57□□□□□ -1.36
KPNB1-208ENST00000580019 ZNF468Q5VIY5 522 aaPredicted RBP6.57□□□□□ -1.36
KPNB1-208ENST00000580019 TMEM214Q6NUQ4 689 aaKnown RBP6.57□□□□□ -1.36
KPNB1-208ENST00000580019 ESF1Q9H501 851 aaKnown RBP6.57□□□□□ -1.36
KPNB1-208ENST00000580019 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
KPNB1-208ENST00000580019 ATXN7O15265 892 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-208ENST00000580019 CD33P20138 364 aa6.56□□□□□ -1.36
KPNB1-208ENST00000580019 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
KPNB1-208ENST00000580019 RAB6BQ9NRW1 208 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 474 ms