RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 ATP6V1AP38606 617 aa23.41■■□□□ 1.34
NDEL1-206ENST00000579880 LINC00116Q8NCU8 138 aa23.41■■□□□ 1.34
NDEL1-206ENST00000579880 CABP4P57796 275 aa23.4■■□□□ 1.34
NDEL1-206ENST00000579880 ITPK1Q13572 414 aa23.4■■□□□ 1.34
NDEL1-206ENST00000579880 CNGB1Q14028 1251 aaPredicted RBP23.4■■□□□ 1.34
NDEL1-206ENST00000579880 MSL1Q68DK7 614 aa23.4■■□□□ 1.34
NDEL1-206ENST00000579880 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
NDEL1-206ENST00000579880 PHF14O94880 888 aa23.38■■□□□ 1.33
NDEL1-206ENST00000579880 AMIGO3Q86WK7 504 aa23.38■■□□□ 1.33
NDEL1-206ENST00000579880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.37■■□□□ 1.33
NDEL1-206ENST00000579880 HMOX1P09601 288 aa23.37■■□□□ 1.33
NDEL1-206ENST00000579880 SSFA2P28290 1259 aa23.37■■□□□ 1.33
NDEL1-206ENST00000579880 RBM42Q9BTD8 480 aaKnown RBP23.36■■□□□ 1.33
NDEL1-206ENST00000579880 UBR3Q6ZT12 1888 aa23.35■■□□□ 1.33
NDEL1-206ENST00000579880 SMIM5Q71RC9 77 aa23.35■■□□□ 1.33
NDEL1-206ENST00000579880 GNPATO15228 680 aa23.34■■□□□ 1.33
NDEL1-206ENST00000579880 AKAP4Q5JQC9 854 aa23.34■■□□□ 1.33
NDEL1-206ENST00000579880 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
NDEL1-206ENST00000579880 NFATC2IPQ8NCF5 419 aa23.32■■□□□ 1.32
NDEL1-206ENST00000579880 NLGN2Q8NFZ4 835 aa23.32■■□□□ 1.32
NDEL1-206ENST00000579880 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
NDEL1-206ENST00000579880 COL3A1P02461 1466 aaPredicted RBP23.31■■□□□ 1.32
NDEL1-206ENST00000579880 GPR162Q16538 588 aa23.31■■□□□ 1.32
NDEL1-206ENST00000579880 SCN11AQ9UI33 1791 aa23.28■■□□□ 1.32
NDEL1-206ENST00000579880 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 PTCD1O75127 700 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 RC3H1Q5TC82 1133 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 RTCBQ9Y3I0 505 aaKnown RBP23.28■■□□□ 1.32
NDEL1-206ENST00000579880 CNTNAP4Q9C0A0 1308 aa23.28■■□□□ 1.32
NDEL1-206ENST00000579880 SLC52A2Q9HAB3 445 aa23.27■■□□□ 1.32
NDEL1-206ENST00000579880 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
NDEL1-206ENST00000579880 LGR6Q9HBX8 967 aa23.26■■□□□ 1.31
NDEL1-206ENST00000579880 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
NDEL1-206ENST00000579880 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
NDEL1-206ENST00000579880 TRAPPC3LQ5T215 181 aa23.25■■□□□ 1.31
NDEL1-206ENST00000579880 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
NDEL1-206ENST00000579880 MRC1P22897 1456 aa23.24■■□□□ 1.31
NDEL1-206ENST00000579880 ADRA2BP18089 450 aa23.24■■□□□ 1.31
NDEL1-206ENST00000579880 RPS6KA4O75676 772 aa23.23■■□□□ 1.31
NDEL1-206ENST00000579880 ARHGEF1Q92888 912 aaKnown RBP23.21■■□□□ 1.31
NDEL1-206ENST00000579880 ADAMTS7Q9UKP4 1686 aa23.2■■□□□ 1.3
NDEL1-206ENST00000579880 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
NDEL1-206ENST00000579880 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
NDEL1-206ENST00000579880 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
NDEL1-206ENST00000579880 TJP1Q07157 1748 aa23.19■■□□□ 1.3
NDEL1-206ENST00000579880 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-206ENST00000579880 MMP10P09238 476 aa23.19■■□□□ 1.3
NDEL1-206ENST00000579880 RFC4P35249 363 aa23.19■■□□□ 1.3
NDEL1-206ENST00000579880 YBX3P16989 372 aaKnown RBP eCLIP23.18■■□□□ 1.3
NDEL1-206ENST00000579880 SLC39A6Q13433 755 aa23.18■■□□□ 1.3
NDEL1-206ENST00000579880 NLGN1Q8N2Q7 840 aa23.18■■□□□ 1.3
NDEL1-206ENST00000579880 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
NDEL1-206ENST00000579880 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
NDEL1-206ENST00000579880 DNAJC10Q8IXB1 793 aa23.17■■□□□ 1.3
NDEL1-206ENST00000579880 CHD4Q14839 1912 aa23.17■■□□□ 1.3
NDEL1-206ENST00000579880 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
NDEL1-206ENST00000579880 KCPQ6ZWJ8 1503 aa23.15■■□□□ 1.3
NDEL1-206ENST00000579880 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
NDEL1-206ENST00000579880 GYS1P13807 737 aa23.15■■□□□ 1.3
NDEL1-206ENST00000579880 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
NDEL1-206ENST00000579880 ZNF784Q8NCA9 323 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-206ENST00000579880 RSPH6AQ9H0K4 717 aa23.15■■□□□ 1.3
NDEL1-206ENST00000579880 VIRMAQ69YN4 1812 aaKnown RBP23.15■■□□□ 1.3
NDEL1-206ENST00000579880 INTS5Q6P9B9 1019 aaKnown RBP23.14■■□□□ 1.29
NDEL1-206ENST00000579880 TEFQ10587 303 aa23.13■■□□□ 1.29
NDEL1-206ENST00000579880 IL17REQ8NFR9 667 aa23.13■■□□□ 1.29
NDEL1-206ENST00000579880 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
NDEL1-206ENST00000579880 C4AP0C0L4 1744 aa23.13■■□□□ 1.29
NDEL1-206ENST00000579880 U2AF1L5P0DN76 240 aaPredicted RBP23.12■■□□□ 1.29
NDEL1-206ENST00000579880 U2AF1Q01081 240 aaKnown RBP eCLIP23.12■■□□□ 1.29
NDEL1-206ENST00000579880 PHACTR3Q96KR7 559 aa23.12■■□□□ 1.29
NDEL1-206ENST00000579880 UTRNP46939 3433 aa23.11■■□□□ 1.29
NDEL1-206ENST00000579880 CYP19A1P11511 503 aaPredicted RBP23.11■■□□□ 1.29
NDEL1-206ENST00000579880 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
NDEL1-206ENST00000579880 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
NDEL1-206ENST00000579880 USP42Q9H9J4 1324 aaKnown RBP23.1■■□□□ 1.29
NDEL1-206ENST00000579880 SRP68Q9UHB9 627 aaKnown RBP23.1■■□□□ 1.29
NDEL1-206ENST00000579880 PARP3Q9Y6F1 533 aa23.09■■□□□ 1.29
NDEL1-206ENST00000579880 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-206ENST00000579880 WWC3Q9ULE0 1092 aa23.08■■□□□ 1.29
NDEL1-206ENST00000579880 UBR2Q8IWV8 1755 aa23.08■■□□□ 1.29
NDEL1-206ENST00000579880 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.28
NDEL1-206ENST00000579880 CEMIPQ8WUJ3 1361 aa23.07■■□□□ 1.28
NDEL1-206ENST00000579880 FCHSD2O94868 740 aa23.07■■□□□ 1.28
NDEL1-206ENST00000579880 FKBP8Q14318 412 aa23.07■■□□□ 1.28
NDEL1-206ENST00000579880 TGFB2P61812 414 aa23.06■■□□□ 1.28
NDEL1-206ENST00000579880 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
NDEL1-206ENST00000579880 ZBTB1Q9Y2K1 713 aa23.06■■□□□ 1.28
NDEL1-206ENST00000579880 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
NDEL1-206ENST00000579880 ZPR1O75312 459 aa23.05■■□□□ 1.28
NDEL1-206ENST00000579880 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-206ENST00000579880 KIF13BQ9NQT8 1826 aa23.05■■□□□ 1.28
NDEL1-206ENST00000579880 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
NDEL1-206ENST00000579880 COL15A1P39059 1388 aa23.04■■□□□ 1.28
NDEL1-206ENST00000579880 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
NDEL1-206ENST00000579880 STARD3NLO95772 234 aa23.04■■□□□ 1.28
NDEL1-206ENST00000579880 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
NDEL1-206ENST00000579880 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms