RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 COL23A1Q86Y22 540 aaPredicted RBP35.09■■■■□ 3.21
LIMD2-208ENST00000579814 GAS2L2Q8NHY3 880 aa35.09■■■■□ 3.21
LIMD2-208ENST00000579814 SGIP1Q9BQI5 828 aa35.09■■■■□ 3.21
LIMD2-208ENST00000579814 LGR6Q9HBX8 967 aa35.09■■■■□ 3.21
LIMD2-208ENST00000579814 RNMTO43148 476 aaKnown RBP35.08■■■■□ 3.21
LIMD2-208ENST00000579814 U2AF1L5P0DN76 240 aaPredicted RBP35.08■■■■□ 3.21
LIMD2-208ENST00000579814 U2AF1Q01081 240 aaKnown RBP eCLIP35.08■■■■□ 3.21
LIMD2-208ENST00000579814 ITPK1Q13572 414 aa35.08■■■■□ 3.21
LIMD2-208ENST00000579814 LINC00116Q8NCU8 138 aa35.08■■■■□ 3.21
LIMD2-208ENST00000579814 SLC52A2Q9HAB3 445 aa35.06■■■■□ 3.2
LIMD2-208ENST00000579814 POLD1P28340 1107 aa35.05■■■■□ 3.2
LIMD2-208ENST00000579814 PRKAR2BP31323 418 aa35.05■■■■□ 3.2
LIMD2-208ENST00000579814 RSPH6AQ9H0K4 717 aa35.05■■■■□ 3.2
LIMD2-208ENST00000579814 ARXQ96QS3 562 aa35.04■■■■□ 3.2
LIMD2-208ENST00000579814 RALBP1Q15311 655 aa35.03■■■■□ 3.2
LIMD2-208ENST00000579814 PTCD1O75127 700 aaKnown RBP35.02■■■■□ 3.2
LIMD2-208ENST00000579814 FCHSD2O94868 740 aa35.02■■■■□ 3.2
LIMD2-208ENST00000579814 SLC4A9Q96Q91 983 aa35.02■■■■□ 3.2
LIMD2-208ENST00000579814 GNAT3A8MTJ3 354 aa35.01■■■■□ 3.2
LIMD2-208ENST00000579814 PHACTR3Q96KR7 559 aa34.99■■■■□ 3.19
LIMD2-208ENST00000579814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.98■■■■□ 3.19
LIMD2-208ENST00000579814 GNPATO15228 680 aa34.98■■■■□ 3.19
LIMD2-208ENST00000579814 PHF14O94880 888 aa34.98■■■■□ 3.19
LIMD2-208ENST00000579814 SSFA2P28290 1259 aa34.98■■■■□ 3.19
LIMD2-208ENST00000579814 FHDC1Q9C0D6 1143 aaPredicted RBP34.97■■■■□ 3.19
LIMD2-208ENST00000579814 C5P01031 1676 aa34.97■■■■□ 3.19
LIMD2-208ENST00000579814 MAP3K5Q99683 1374 aa34.96■■■■□ 3.19
LIMD2-208ENST00000579814 DCAF8L1A6NGE4 600 aa34.95■■■■□ 3.19
LIMD2-208ENST00000579814 RC3H1Q5TC82 1133 aaKnown RBP34.95■■■■□ 3.19
LIMD2-208ENST00000579814 AMIGO3Q86WK7 504 aa34.95■■■■□ 3.19
LIMD2-208ENST00000579814 SYT17Q9BSW7 474 aa34.95■■■■□ 3.19
LIMD2-208ENST00000579814 C4BP0C0L5 1744 aa34.95■■■■□ 3.18
LIMD2-208ENST00000579814 QSER1Q2KHR3 1735 aa34.95■■■■□ 3.18
LIMD2-208ENST00000579814 SMIM5Q71RC9 77 aa34.93■■■■□ 3.18
LIMD2-208ENST00000579814 IL17REQ8NFR9 667 aa34.93■■■■□ 3.18
LIMD2-208ENST00000579814 RTCBQ9Y3I0 505 aaKnown RBP34.93■■■■□ 3.18
LIMD2-208ENST00000579814 TEFQ10587 303 aa34.92■■■■□ 3.18
LIMD2-208ENST00000579814 SLC39A6Q13433 755 aa34.92■■■■□ 3.18
LIMD2-208ENST00000579814 MSL1Q68DK7 614 aa34.92■■■■□ 3.18
LIMD2-208ENST00000579814 CNTNAP4Q9C0A0 1308 aa34.9■■■■□ 3.18
LIMD2-208ENST00000579814 NEFMP07197 916 aa34.9■■■■□ 3.18
LIMD2-208ENST00000579814 TRAPPC3LQ5T215 181 aa34.89■■■■□ 3.18
LIMD2-208ENST00000579814 TAF1LQ8IZX4 1826 aa34.88■■■■□ 3.17
LIMD2-208ENST00000579814 MRC1P22897 1456 aa34.87■■■■□ 3.17
LIMD2-208ENST00000579814 RPS6KA4O75676 772 aa34.87■■■■□ 3.17
LIMD2-208ENST00000579814 RTF1Q92541 710 aaKnown RBP34.87■■■■□ 3.17
LIMD2-208ENST00000579814 TTC5Q8N0Z6 440 aa34.86■■■■□ 3.17
LIMD2-208ENST00000579814 KLHL34Q8N239 644 aa34.86■■■■□ 3.17
LIMD2-208ENST00000579814 SCN11AQ9UI33 1791 aa34.86■■■■□ 3.17
LIMD2-208ENST00000579814 TUBGCP6Q96RT7 1819 aa34.85■■■■□ 3.17
LIMD2-208ENST00000579814 ADRA2BP18089 450 aa34.85■■■■□ 3.17
LIMD2-208ENST00000579814 PNNQ9H307 717 aaKnown RBP34.85■■■■□ 3.17
LIMD2-208ENST00000579814 CRKLP46109 303 aaKnown RBP34.84■■■■□ 3.17
LIMD2-208ENST00000579814 MYBBP1AQ9BQG0 1328 aaKnown RBP34.82■■■■□ 3.17
LIMD2-208ENST00000579814 DNAJC10Q8IXB1 793 aa34.82■■■■□ 3.16
LIMD2-208ENST00000579814 HTATSF1O43719 755 aaKnown RBP34.81■■■■□ 3.16
LIMD2-208ENST00000579814 VSIG10Q8N0Z9 540 aa34.81■■■■□ 3.16
LIMD2-208ENST00000579814 ARHGEF1Q92888 912 aaKnown RBP34.81■■■■□ 3.16
LIMD2-208ENST00000579814 CEMIPQ8WUJ3 1361 aa34.8■■■■□ 3.16
LIMD2-208ENST00000579814 RFC4P35249 363 aa34.8■■■■□ 3.16
LIMD2-208ENST00000579814 ZNF831Q5JPB2 1677 aa34.79■■■■□ 3.16
LIMD2-208ENST00000579814 ZNF790Q6PG37 636 aa34.79■■■■□ 3.16
LIMD2-208ENST00000579814 ADAMTS7Q9UKP4 1686 aa34.78■■■■□ 3.16
LIMD2-208ENST00000579814 BTBD11A6QL63 1104 aa34.76■■■■□ 3.16
LIMD2-208ENST00000579814 INTS5Q6P9B9 1019 aaKnown RBP34.76■■■■□ 3.16
LIMD2-208ENST00000579814 MCM10Q7L590 875 aa34.76■■■■□ 3.16
LIMD2-208ENST00000579814 PLEKHF1Q96S99 279 aa34.76■■■■□ 3.16
LIMD2-208ENST00000579814 CCDC87Q9NVE4 849 aa34.76■■■■□ 3.16
LIMD2-208ENST00000579814 CYP19A1P11511 503 aaPredicted RBP34.75■■■■□ 3.15
LIMD2-208ENST00000579814 NLGN1Q8N2Q7 840 aa34.75■■■■□ 3.15
LIMD2-208ENST00000579814 UBR3Q6ZT12 1888 aa34.75■■■■□ 3.15
LIMD2-208ENST00000579814 ZNF496Q96IT1 587 aaPredicted RBP34.73■■■■□ 3.15
LIMD2-208ENST00000579814 PRKRIP1Q9H875 184 aaPredicted RBP34.73■■■■□ 3.15
LIMD2-208ENST00000579814 MAPK8IP3Q9UPT6 1336 aa34.73■■■■□ 3.15
LIMD2-208ENST00000579814 STARD3NLO95772 234 aa34.72■■■■□ 3.15
LIMD2-208ENST00000579814 DCTN1Q14203 1278 aa34.72■■■■□ 3.15
LIMD2-208ENST00000579814 TEX13AQ9BXU3 409 aaPredicted RBP34.72■■■■□ 3.15
LIMD2-208ENST00000579814 COL24A1Q17RW2 1714 aa34.72■■■■□ 3.15
LIMD2-208ENST00000579814 FMNL2Q96PY5 1086 aa34.71■■■■□ 3.15
LIMD2-208ENST00000579814 CD2APQ9Y5K6 639 aa34.71■■■■□ 3.15
LIMD2-208ENST00000579814 KCPQ6ZWJ8 1503 aa34.71■■■■□ 3.15
LIMD2-208ENST00000579814 NFE2L2Q16236 605 aa34.7■■■■□ 3.15
LIMD2-208ENST00000579814 MMP10P09238 476 aa34.68■■■■□ 3.14
LIMD2-208ENST00000579814 GYS1P13807 737 aa34.68■■■■□ 3.14
LIMD2-208ENST00000579814 NLGN2Q8NFZ4 835 aa34.68■■■■□ 3.14
LIMD2-208ENST00000579814 HEG1Q9ULI3 1381 aa34.68■■■■□ 3.14
LIMD2-208ENST00000579814 ZNF316A6NFI3 1004 aaPredicted RBP34.66■■■■□ 3.14
LIMD2-208ENST00000579814 KCNQ3O43525 872 aa34.66■■■■□ 3.14
LIMD2-208ENST00000579814 TAF7Q15545 349 aaPredicted RBP34.66■■■■□ 3.14
LIMD2-208ENST00000579814 COL5A3P25940 1745 aaPredicted RBP34.66■■■■□ 3.14
LIMD2-208ENST00000579814 SOS1Q07889 1333 aaPredicted RBP34.65■■■■□ 3.14
LIMD2-208ENST00000579814 GPR162Q16538 588 aa34.65■■■■□ 3.14
LIMD2-208ENST00000579814 ZBTB1Q9Y2K1 713 aa34.65■■■■□ 3.14
LIMD2-208ENST00000579814 WDR43Q15061 677 aaKnown RBP eCLIP34.64■■■■□ 3.14
LIMD2-208ENST00000579814 ZPR1O75312 459 aa34.63■■■■□ 3.13
LIMD2-208ENST00000579814 SRP68Q9UHB9 627 aaKnown RBP34.63■■■■□ 3.13
LIMD2-208ENST00000579814 USP42Q9H9J4 1324 aaKnown RBP34.62■■■■□ 3.13
LIMD2-208ENST00000579814 TJP1Q07157 1748 aa34.62■■■■□ 3.13
LIMD2-208ENST00000579814 CANXP27824 592 aaKnown RBP34.62■■■■□ 3.13
LIMD2-208ENST00000579814 CICQ96RK0 1608 aaPredicted RBP34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms