RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
SSH2-208ENST00000579040 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
SSH2-208ENST00000579040 COL5A3P25940 1745 aaPredicted RBP15.67■□□□□ 0.1
SSH2-208ENST00000579040 SSFA2P28290 1259 aa15.66■□□□□ 0.1
SSH2-208ENST00000579040 MTHFSP49914 203 aa15.66■□□□□ 0.1
SSH2-208ENST00000579040 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
SSH2-208ENST00000579040 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
SSH2-208ENST00000579040 ITPK1Q13572 414 aa15.64■□□□□ 0.09
SSH2-208ENST00000579040 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
SSH2-208ENST00000579040 KLHL34Q8N239 644 aa15.64■□□□□ 0.09
SSH2-208ENST00000579040 CICQ96RK0 1608 aaPredicted RBP15.64■□□□□ 0.09
SSH2-208ENST00000579040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
SSH2-208ENST00000579040 CABP4P57796 275 aa15.63■□□□□ 0.09
SSH2-208ENST00000579040 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
SSH2-208ENST00000579040 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
SSH2-208ENST00000579040 AMIGO3Q86WK7 504 aa15.62■□□□□ 0.09
SSH2-208ENST00000579040 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
SSH2-208ENST00000579040 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
SSH2-208ENST00000579040 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
SSH2-208ENST00000579040 GNPATO15228 680 aa15.61■□□□□ 0.09
SSH2-208ENST00000579040 PHF14O94880 888 aa15.61■□□□□ 0.09
SSH2-208ENST00000579040 GPR162Q16538 588 aa15.61■□□□□ 0.09
SSH2-208ENST00000579040 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
SSH2-208ENST00000579040 MRC1P22897 1456 aa15.6■□□□□ 0.09
SSH2-208ENST00000579040 RC3H1Q5TC82 1133 aaKnown RBP15.6■□□□□ 0.09
SSH2-208ENST00000579040 NLGN2Q8NFZ4 835 aa15.6■□□□□ 0.09
SSH2-208ENST00000579040 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
SSH2-208ENST00000579040 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
SSH2-208ENST00000579040 CNTNAP4Q9C0A0 1308 aa15.6■□□□□ 0.09
SSH2-208ENST00000579040 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
SSH2-208ENST00000579040 TJP1Q07157 1748 aa15.59■□□□□ 0.09
SSH2-208ENST00000579040 C4AP0C0L4 1744 aa15.58■□□□□ 0.08
SSH2-208ENST00000579040 HMOX1P09601 288 aa15.58■□□□□ 0.08
SSH2-208ENST00000579040 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SSH2-208ENST00000579040 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
SSH2-208ENST00000579040 RTCBQ9Y3I0 505 aaKnown RBP15.58■□□□□ 0.08
SSH2-208ENST00000579040 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
SSH2-208ENST00000579040 SMIM5Q71RC9 77 aa15.56■□□□□ 0.08
SSH2-208ENST00000579040 SLC52A2Q9HAB3 445 aa15.56■□□□□ 0.08
SSH2-208ENST00000579040 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
SSH2-208ENST00000579040 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
SSH2-208ENST00000579040 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
SSH2-208ENST00000579040 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
SSH2-208ENST00000579040 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
SSH2-208ENST00000579040 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
SSH2-208ENST00000579040 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
SSH2-208ENST00000579040 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
SSH2-208ENST00000579040 NLGN1Q8N2Q7 840 aa15.53■□□□□ 0.08
SSH2-208ENST00000579040 ZNF784Q8NCA9 323 aaPredicted RBP15.53■□□□□ 0.08
SSH2-208ENST00000579040 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
SSH2-208ENST00000579040 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
SSH2-208ENST00000579040 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.08
SSH2-208ENST00000579040 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.08
SSH2-208ENST00000579040 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
SSH2-208ENST00000579040 CRKLP46109 303 aaKnown RBP15.52■□□□□ 0.08
SSH2-208ENST00000579040 CNGB1Q14028 1251 aaPredicted RBP15.52■□□□□ 0.08
SSH2-208ENST00000579040 ARHGEF1Q92888 912 aaKnown RBP15.52■□□□□ 0.08
SSH2-208ENST00000579040 KCPQ6ZWJ8 1503 aa15.52■□□□□ 0.07
SSH2-208ENST00000579040 MMP10P09238 476 aa15.51■□□□□ 0.07
SSH2-208ENST00000579040 RFC4P35249 363 aa15.51■□□□□ 0.07
SSH2-208ENST00000579040 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
SSH2-208ENST00000579040 KIAA1551Q9HCM1 1747 aa15.5■□□□□ 0.07
SSH2-208ENST00000579040 GYS1P13807 737 aa15.49■□□□□ 0.07
SSH2-208ENST00000579040 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
SSH2-208ENST00000579040 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
SSH2-208ENST00000579040 PPP2R1AP30153 589 aa15.48■□□□□ 0.07
SSH2-208ENST00000579040 VSIG10Q8N0Z9 540 aa15.48■□□□□ 0.07
SSH2-208ENST00000579040 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
SSH2-208ENST00000579040 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
SSH2-208ENST00000579040 C10orf71Q711Q0 1435 aa15.48■□□□□ 0.07
SSH2-208ENST00000579040 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
SSH2-208ENST00000579040 BRCA1P38398 1863 aaKnown RBP15.47■□□□□ 0.07
SSH2-208ENST00000579040 SLC39A6Q13433 755 aa15.47■□□□□ 0.07
SSH2-208ENST00000579040 INTS5Q6P9B9 1019 aaKnown RBP15.47■□□□□ 0.07
SSH2-208ENST00000579040 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
SSH2-208ENST00000579040 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
SSH2-208ENST00000579040 TEFQ10587 303 aa15.46■□□□□ 0.07
SSH2-208ENST00000579040 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
SSH2-208ENST00000579040 PARP3Q9Y6F1 533 aa15.46■□□□□ 0.07
SSH2-208ENST00000579040 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.06
SSH2-208ENST00000579040 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
SSH2-208ENST00000579040 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
SSH2-208ENST00000579040 TGFB2P61812 414 aa15.45■□□□□ 0.06
SSH2-208ENST00000579040 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
SSH2-208ENST00000579040 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
SSH2-208ENST00000579040 IL17REQ8NFR9 667 aa15.44■□□□□ 0.06
SSH2-208ENST00000579040 ARFGEF1Q9Y6D6 1849 aa15.43■□□□□ 0.06
SSH2-208ENST00000579040 FCHSD2O94868 740 aa15.43■□□□□ 0.06
SSH2-208ENST00000579040 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
SSH2-208ENST00000579040 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
SSH2-208ENST00000579040 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
SSH2-208ENST00000579040 PHACTR3Q96KR7 559 aa15.43■□□□□ 0.06
SSH2-208ENST00000579040 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
SSH2-208ENST00000579040 COL15A1P39059 1388 aa15.43■□□□□ 0.06
SSH2-208ENST00000579040 ZPR1O75312 459 aa15.42■□□□□ 0.06
SSH2-208ENST00000579040 ZNF790Q6PG37 636 aa15.42■□□□□ 0.06
SSH2-208ENST00000579040 AFDNP55196 1824 aaKnown RBP15.42■□□□□ 0.06
SSH2-208ENST00000579040 UTRNP46939 3433 aa15.42■□□□□ 0.06
SSH2-208ENST00000579040 HEG1Q9ULI3 1381 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 NRXN2Q9P2S2 1712 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms