RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 RGS12O14924 1447 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 ST18O60284 1047 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 TSC1Q92574 1164 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
RBFOX3-201ENST00000578887 CDC42BPGQ6DT37 1551 aa17.03■□□□□ 0.32
RBFOX3-201ENST00000578887 MCM10Q7L590 875 aa17.03■□□□□ 0.32
RBFOX3-201ENST00000578887 MIS18AQ9NYP9 233 aa17.03■□□□□ 0.32
RBFOX3-201ENST00000578887 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 DTNBO60941 627 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 HS1BP3Q53T59 392 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 ZNF830Q96NB3 372 aaPredicted RBP17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
RBFOX3-201ENST00000578887 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.31
RBFOX3-201ENST00000578887 DLC1Q96QB1 1528 aa17.02■□□□□ 0.31
RBFOX3-201ENST00000578887 F6X3S4 739 aa17.01■□□□□ 0.31
RBFOX3-201ENST00000578887 C17orf53Q8N3J3 647 aaPredicted RBP17■□□□□ 0.31
RBFOX3-201ENST00000578887 SLIT1O75093 1534 aa17■□□□□ 0.31
RBFOX3-201ENST00000578887 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
RBFOX3-201ENST00000578887 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
RBFOX3-201ENST00000578887 ERC2O15083 957 aa17■□□□□ 0.31
RBFOX3-201ENST00000578887 ARHGAP23Q9P227 1491 aa17■□□□□ 0.31
RBFOX3-201ENST00000578887 G2E3Q7L622 706 aa16.99■□□□□ 0.31
RBFOX3-201ENST00000578887 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
RBFOX3-201ENST00000578887 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
RBFOX3-201ENST00000578887 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
RBFOX3-201ENST00000578887 PRDM4Q9UKN5 801 aa16.99■□□□□ 0.31
RBFOX3-201ENST00000578887 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 TERF1P54274 439 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 PDE1AP54750 535 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 IL25Q9H293 177 aa16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
RBFOX3-201ENST00000578887 REC8O95072 547 aa16.97■□□□□ 0.31
RBFOX3-201ENST00000578887 BRD1O95696 1058 aa16.97■□□□□ 0.31
RBFOX3-201ENST00000578887 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
RBFOX3-201ENST00000578887 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
RBFOX3-201ENST00000578887 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
RBFOX3-201ENST00000578887 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
RBFOX3-201ENST00000578887 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
RBFOX3-201ENST00000578887 UNC5CLQ8IV45 518 aa16.95■□□□□ 0.3
RBFOX3-201ENST00000578887 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
RBFOX3-201ENST00000578887 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
RBFOX3-201ENST00000578887 CPS1P31327 1500 aa16.94■□□□□ 0.3
RBFOX3-201ENST00000578887 TECPR2O15040 1411 aa16.94■□□□□ 0.3
RBFOX3-201ENST00000578887 ROBO2Q9HCK4 1378 aa16.94■□□□□ 0.3
RBFOX3-201ENST00000578887 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
RBFOX3-201ENST00000578887 ANO2Q9NQ90 1003 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 TCHHQ07283 1943 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 TSPY26PQ9H489 355 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 FOXO3O43524 673 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 ESYT1Q9BSJ8 1104 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 USP25Q9UHP3 1055 aa16.93■□□□□ 0.3
RBFOX3-201ENST00000578887 CHL1O00533 1208 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
RBFOX3-201ENST00000578887 SOX12O15370 315 aa16.91■□□□□ 0.3
RBFOX3-201ENST00000578887 CUL4AQ13619 759 aa16.91■□□□□ 0.3
RBFOX3-201ENST00000578887 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
RBFOX3-201ENST00000578887 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
RBFOX3-201ENST00000578887 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
RBFOX3-201ENST00000578887 MBD3O95983 291 aa16.9■□□□□ 0.3
RBFOX3-201ENST00000578887 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
RBFOX3-201ENST00000578887 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
RBFOX3-201ENST00000578887 ZNF142P52746 1687 aaPredicted RBP16.9■□□□□ 0.3
RBFOX3-201ENST00000578887 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 COG3Q96JB2 828 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 SALL3Q9BXA9 1300 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 MAP4K4O95819 1239 aaPredicted RBP16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 CHMLP26374 656 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 MCM5P33992 734 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 SIRT1Q96EB6 747 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
RBFOX3-201ENST00000578887 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
RBFOX3-201ENST00000578887 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
RBFOX3-201ENST00000578887 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
RBFOX3-201ENST00000578887 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
RBFOX3-201ENST00000578887 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
RBFOX3-201ENST00000578887 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
RBFOX3-201ENST00000578887 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
RBFOX3-201ENST00000578887 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
RBFOX3-201ENST00000578887 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms