RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 MRE11P49959 708 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
RTTN-202ENST00000578780 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
RTTN-202ENST00000578780 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
RTTN-202ENST00000578780 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
RTTN-202ENST00000578780 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
RTTN-202ENST00000578780 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
RTTN-202ENST00000578780 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
RTTN-202ENST00000578780 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
RTTN-202ENST00000578780 CENPQQ7L2Z9 268 aaPredicted RBP12.53□□□□□ -0.4
RTTN-202ENST00000578780 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
RTTN-202ENST00000578780 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
RTTN-202ENST00000578780 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
RTTN-202ENST00000578780 TERF1P54274 439 aa12.51□□□□□ -0.41
RTTN-202ENST00000578780 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
RTTN-202ENST00000578780 IL17REQ8NFR9 667 aa12.51□□□□□ -0.41
RTTN-202ENST00000578780 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
RTTN-202ENST00000578780 ERBB3P21860 1342 aa12.51□□□□□ -0.41
RTTN-202ENST00000578780 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
RTTN-202ENST00000578780 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
RTTN-202ENST00000578780 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 OFD1O75665 1012 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
RTTN-202ENST00000578780 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
RTTN-202ENST00000578780 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 ANTXR1Q9H6X2 564 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 NCAPD2Q15021 1401 aa12.5□□□□□ -0.41
RTTN-202ENST00000578780 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 VGLL3A8MV65 326 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
RTTN-202ENST00000578780 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
RTTN-202ENST00000578780 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 IGHDP01880 384 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
RTTN-202ENST00000578780 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
RTTN-202ENST00000578780 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 DDX19BQ9UMR2 479 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 CSB-PGBD3P0DP91 1061 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
RTTN-202ENST00000578780 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
RTTN-202ENST00000578780 CPDO75976 1380 aa12.47□□□□□ -0.41
RTTN-202ENST00000578780 TRIM44Q96DX7 344 aaPredicted RBP12.47□□□□□ -0.41
RTTN-202ENST00000578780 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
RTTN-202ENST00000578780 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
RTTN-202ENST00000578780 CRYBG1Q9Y4K1 1723 aa12.47□□□□□ -0.41
RTTN-202ENST00000578780 CAMTA1Q9Y6Y1 1673 aa12.46□□□□□ -0.41
RTTN-202ENST00000578780 COL18A1P39060 1754 aa12.46□□□□□ -0.41
RTTN-202ENST00000578780 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.41
RTTN-202ENST00000578780 ARID3AQ99856 593 aa12.46□□□□□ -0.41
RTTN-202ENST00000578780 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
RTTN-202ENST00000578780 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.42
RTTN-202ENST00000578780 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
RTTN-202ENST00000578780 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
RTTN-202ENST00000578780 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
RTTN-202ENST00000578780 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
RTTN-202ENST00000578780 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
RTTN-202ENST00000578780 ABCC6O95255 1503 aa12.44□□□□□ -0.42
RTTN-202ENST00000578780 MCM4P33991 863 aa12.44□□□□□ -0.42
RTTN-202ENST00000578780 TEFQ10587 303 aa12.44□□□□□ -0.42
RTTN-202ENST00000578780 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
RTTN-202ENST00000578780 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
RTTN-202ENST00000578780 ABCC4O15439 1325 aa12.43□□□□□ -0.42
RTTN-202ENST00000578780 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
RTTN-202ENST00000578780 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
RTTN-202ENST00000578780 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.43□□□□□ -0.42
RTTN-202ENST00000578780 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
RTTN-202ENST00000578780 RWDD1Q9H446 243 aaPredicted RBP12.43□□□□□ -0.42
RTTN-202ENST00000578780 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
RTTN-202ENST00000578780 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
RTTN-202ENST00000578780 TRAK2O60296 914 aa12.43□□□□□ -0.42
RTTN-202ENST00000578780 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
RTTN-202ENST00000578780 KIF20AO95235 890 aa12.42□□□□□ -0.42
RTTN-202ENST00000578780 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
RTTN-202ENST00000578780 ZBTB7BO15156 539 aaPredicted RBP12.41□□□□□ -0.42
RTTN-202ENST00000578780 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
RTTN-202ENST00000578780 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
RTTN-202ENST00000578780 PTPRCP08575 1304 aa12.41□□□□□ -0.42
RTTN-202ENST00000578780 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
RTTN-202ENST00000578780 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
RTTN-202ENST00000578780 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 BECN1Q14457 450 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 CCDC30Q5VVM6 783 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 MEGF6O75095 1541 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
RTTN-202ENST00000578780 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
RTTN-202ENST00000578780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
RTTN-202ENST00000578780 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
RTTN-202ENST00000578780 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 UQCRHLA0A096LP55 91 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 UQCRHP07919 91 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 EIF4A1P60842 406 aaKnown RBP12.39□□□□□ -0.43
RTTN-202ENST00000578780 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 G2E3Q7L622 706 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms