RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 GOLGA6L9A6NEM1 432 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 CCDC69A6NI79 296 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 PSMA5P28066 241 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 DBN1Q16643 649 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 NUCKS1Q9H1E3 243 aaKnown RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 VGFO15240 615 aaPredicted RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 ZNHIT6Q9NWK9 470 aaKnown RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 BUB1BO60566 1050 aaPredicted RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 AFAP1L1Q8TED9 768 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 ZNF215Q9UL58 517 aaPredicted RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 CAPN7Q9Y6W3 813 aa10.87□□□□□ -0.67
EPB41L3-214ENST00000578618 FAM76AQ8TAV0 307 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 TCP11L2Q8N4U5 519 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 CCDC113Q9H0I3 377 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 DDX19AQ9NUU7 478 aaKnown RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 NUP155O75694 1391 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 NDUFAB1O14561 156 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 SATB1Q01826 763 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 SCAND2PQ9GZW5 306 aaPredicted RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 GEMIN8Q9NWZ8 242 aaKnown RBP10.86□□□□□ -0.67
EPB41L3-214ENST00000578618 CTAGE15A4D2H0 777 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 CTAGE8P0CG41 777 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 PPP2R3AQ06190 1150 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 SPECC1LQ69YQ0 1117 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 B4GALNT4Q76KP1 1039 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 CTAGE6Q86UF2 777 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 CTAGE4Q8IX94 777 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 CEP85LQ5SZL2 805 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 TBC1D9Q6ZT07 1266 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 MRFAP1Q9Y605 127 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 TUBB4AP04350 444 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
EPB41L3-214ENST00000578618 RHOXF2BP0C7M4 288 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 PPP2R1AP30153 589 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 NEDD9Q14511 834 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 MAATS1Q7Z4T9 603 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 N4BP2L2Q92802 583 aaPredicted RBP10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 RHOXF2Q9BQY4 288 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 CNPY2Q9Y2B0 182 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 ATF7IPQ6VMQ6 1270 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 CXorf56Q9H5V9 222 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 HSF2BPO75031 334 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 ODF2LQ9ULJ1 636 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
EPB41L3-214ENST00000578618 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CCDC160A6NGH7 325 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 STX1AQ16623 288 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CALR3Q96L12 384 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CARD6Q9BX69 1037 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CCDC6Q16204 474 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CPLX3Q8WVH0 158 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 DNAJC25Q9H1X3 360 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 LRPPRCP42704 1394 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 IFIT2P09913 472 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 MMS22LQ6ZRQ5 1243 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 SEPT6Q14141 434 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 HSP90AB2PQ58FF8 381 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CCDC50Q8IVM0 306 aa10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 TFIP11Q9UBB9 837 aaKnown RBP10.83□□□□□ -0.68
EPB41L3-214ENST00000578618 SRGAP3O43295 1099 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 OPA1O60313 960 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 WHAMMP3Q1A5X7 153 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 GIGYF2Q6Y7W6 1299 aaKnown RBP10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 TERF2IPQ9NYB0 399 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 STX6O43752 255 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 CAVIN2O95810 425 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 PCK1P35558 622 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 TXLNAP40222 546 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 DACH1Q9UI36 760 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 ARHGAP25P42331 645 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 EFCAB13Q8IY85 973 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 MIPOL1Q8TD10 442 aa10.82□□□□□ -0.68
EPB41L3-214ENST00000578618 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms