RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
SREBF1-218ENST00000578469 LRRC37A3O60309 1634 aa21.76■■□□□ 1.07
SREBF1-218ENST00000578469 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
SREBF1-218ENST00000578469 DDB1Q16531 1140 aa21.75■■□□□ 1.07
SREBF1-218ENST00000578469 ALDH1L2Q3SY69 923 aa21.75■■□□□ 1.07
SREBF1-218ENST00000578469 MCM10Q7L590 875 aa21.75■■□□□ 1.07
SREBF1-218ENST00000578469 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
SREBF1-218ENST00000578469 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-218ENST00000578469 TOM1L2Q6ZVM7 507 aa21.74■■□□□ 1.07
SREBF1-218ENST00000578469 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
SREBF1-218ENST00000578469 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
SREBF1-218ENST00000578469 NCAPD2Q15021 1401 aa21.73■■□□□ 1.07
SREBF1-218ENST00000578469 CHL1O00533 1208 aa21.73■■□□□ 1.07
SREBF1-218ENST00000578469 AMOTQ4VCS5 1084 aa21.73■■□□□ 1.07
SREBF1-218ENST00000578469 ERBB3P21860 1342 aa21.73■■□□□ 1.07
SREBF1-218ENST00000578469 PLSCR1O15162 318 aa21.72■■□□□ 1.07
SREBF1-218ENST00000578469 ZKSCAN2Q63HK3 967 aa21.72■■□□□ 1.07
SREBF1-218ENST00000578469 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
SREBF1-218ENST00000578469 SSH1Q8WYL5 1049 aa21.71■■□□□ 1.07
SREBF1-218ENST00000578469 CDCA7Q9BWT1 371 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-218ENST00000578469 SBF2Q86WG5 1849 aa21.71■■□□□ 1.07
SREBF1-218ENST00000578469 IPO8O15397 1037 aaKnown RBP21.7■■□□□ 1.06
SREBF1-218ENST00000578469 BCL11BQ9C0K0 894 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-218ENST00000578469 KIF16BQ96L93 1317 aa21.7■■□□□ 1.06
SREBF1-218ENST00000578469 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
SREBF1-218ENST00000578469 VAMP4O75379 141 aa21.69■■□□□ 1.06
SREBF1-218ENST00000578469 CSB-PGBD3P0DP91 1061 aa21.69■■□□□ 1.06
SREBF1-218ENST00000578469 TWISTNBQ3B726 338 aaPredicted RBP21.69■■□□□ 1.06
SREBF1-218ENST00000578469 BABAM1Q9NWV8 329 aa21.68■■□□□ 1.06
SREBF1-218ENST00000578469 NLRP2Q9NX02 1062 aa21.68■■□□□ 1.06
SREBF1-218ENST00000578469 WDR17Q8IZU2 1322 aa21.68■■□□□ 1.06
SREBF1-218ENST00000578469 COL18A1P39060 1754 aa21.68■■□□□ 1.06
SREBF1-218ENST00000578469 RGPD2P0DJD1 1756 aa21.67■■□□□ 1.06
SREBF1-218ENST00000578469 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
SREBF1-218ENST00000578469 AAMPQ13685 434 aa21.67■■□□□ 1.06
SREBF1-218ENST00000578469 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
SREBF1-218ENST00000578469 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
SREBF1-218ENST00000578469 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-218ENST00000578469 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
SREBF1-218ENST00000578469 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
SREBF1-218ENST00000578469 ANO8Q9HCE9 1232 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-218ENST00000578469 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
SREBF1-218ENST00000578469 RGPD5Q99666 1765 aa21.66■■□□□ 1.06
SREBF1-218ENST00000578469 FAM208AQ9UK61 1670 aaKnown RBP21.66■■□□□ 1.06
SREBF1-218ENST00000578469 BCL9O00512 1426 aa21.65■■□□□ 1.06
SREBF1-218ENST00000578469 C1orf141Q5JVX7 400 aa21.65■■□□□ 1.06
SREBF1-218ENST00000578469 DZIP1LQ8IYY4 767 aaKnown RBP21.65■■□□□ 1.06
SREBF1-218ENST00000578469 C8orf58Q8NAV2 365 aa21.65■■□□□ 1.06
SREBF1-218ENST00000578469 PANK1Q8TE04 598 aa21.65■■□□□ 1.06
SREBF1-218ENST00000578469 TSPYL6Q8N831 410 aa21.64■■□□□ 1.05
SREBF1-218ENST00000578469 PLEKHG2Q9H7P9 1386 aa21.63■■□□□ 1.05
SREBF1-218ENST00000578469 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-218ENST00000578469 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-218ENST00000578469 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-218ENST00000578469 ATF7IPQ6VMQ6 1270 aa21.63■■□□□ 1.05
SREBF1-218ENST00000578469 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
SREBF1-218ENST00000578469 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
SREBF1-218ENST00000578469 COG6Q9Y2V7 657 aa21.63■■□□□ 1.05
SREBF1-218ENST00000578469 MRPL50Q8N5N7 158 aaKnown RBP21.62■■□□□ 1.05
SREBF1-218ENST00000578469 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
SREBF1-218ENST00000578469 MARCH10Q8NA82 808 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-218ENST00000578469 ZBTB7AO95365 584 aa21.6■■□□□ 1.05
SREBF1-218ENST00000578469 ARHGAP45Q92619 1136 aa21.6■■□□□ 1.05
SREBF1-218ENST00000578469 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
SREBF1-218ENST00000578469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.6■■□□□ 1.05
SREBF1-218ENST00000578469 SPG7Q9UQ90 795 aa21.6■■□□□ 1.05
SREBF1-218ENST00000578469 SOS1Q07889 1333 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-218ENST00000578469 CLUAP1Q96AJ1 413 aa21.59■■□□□ 1.05
SREBF1-218ENST00000578469 CEMIPQ8WUJ3 1361 aa21.59■■□□□ 1.05
SREBF1-218ENST00000578469 EXOC5O00471 708 aa21.58■■□□□ 1.05
SREBF1-218ENST00000578469 TRIM27P14373 513 aa21.58■■□□□ 1.05
SREBF1-218ENST00000578469 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
SREBF1-218ENST00000578469 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
SREBF1-218ENST00000578469 TNS2Q63HR2 1409 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 RLBP1P12271 317 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 TEFQ10587 303 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 PTF1AQ7RTS3 328 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 TNNQ9UQP3 1299 aa21.57■■□□□ 1.04
SREBF1-218ENST00000578469 API5Q9BZZ5 524 aaKnown RBP21.56■■□□□ 1.04
SREBF1-218ENST00000578469 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
SREBF1-218ENST00000578469 SLC15A2Q16348 729 aa21.55■■□□□ 1.04
SREBF1-218ENST00000578469 CENPQQ7L2Z9 268 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-218ENST00000578469 PROM2Q8N271 834 aa21.55■■□□□ 1.04
SREBF1-218ENST00000578469 DDX19BQ9UMR2 479 aa21.55■■□□□ 1.04
SREBF1-218ENST00000578469 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
SREBF1-218ENST00000578469 CHMP4AQ9BY43 222 aa21.54■■□□□ 1.04
SREBF1-218ENST00000578469 PDGFDQ9GZP0 370 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-218ENST00000578469 MTFR1LQ9H019 292 aa21.54■■□□□ 1.04
SREBF1-218ENST00000578469 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
SREBF1-218ENST00000578469 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
SREBF1-218ENST00000578469 ATF5Q9Y2D1 282 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-218ENST00000578469 PTGER2P43116 358 aa21.53■■□□□ 1.04
SREBF1-218ENST00000578469 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
SREBF1-218ENST00000578469 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
SREBF1-218ENST00000578469 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
SREBF1-218ENST00000578469 ITPRIPQ8IWB1 547 aa21.52■■□□□ 1.04
SREBF1-218ENST00000578469 IFNL2Q8IZJ0 200 aa21.52■■□□□ 1.04
SREBF1-218ENST00000578469 MEGF6O75095 1541 aa21.5■■□□□ 1.03
SREBF1-218ENST00000578469 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms