RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-206	ENST00000578213	NEUROD2	Q15784	382 aa		29.18	■■■□□ 2.26
PSMD11-206	ENST00000578213	KDM3B	Q7LBC6	1761 aa		29.18	■■■□□ 2.26
PSMD11-206	ENST00000578213	MCM10	Q7L590	875 aa		29.17	■■■□□ 2.26
PSMD11-206	ENST00000578213	TRIM35	Q9UPQ4	493 aa		29.17	■■■□□ 2.26
PSMD11-206	ENST00000578213	ZNF831	Q5JPB2	1677 aa		29.16	■■■□□ 2.26
PSMD11-206	ENST00000578213	PIGB	Q92521	554 aa		29.16	■■■□□ 2.26
PSMD11-206	ENST00000578213	UPF1	Q92900	1129 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
PSMD11-206	ENST00000578213	NFATC2IP	Q8NCF5	419 aa		29.15	■■■□□ 2.26
PSMD11-206	ENST00000578213	DCTN1	Q14203	1278 aa		29.14	■■■□□ 2.26
PSMD11-206	ENST00000578213	RREB1	Q92766	1687 aa		29.13	■■■□□ 2.25
PSMD11-206	ENST00000578213	CALD1	Q05682	793 aa	Known RBP	29.13	■■■□□ 2.25
PSMD11-206	ENST00000578213	PTF1A	Q7RTS3	328 aa		29.13	■■■□□ 2.25
PSMD11-206	ENST00000578213	SMARCC1	Q92922	1105 aa	Predicted RBP	29.13	■■■□□ 2.25
PSMD11-206	ENST00000578213	PLSCR1	O15162	318 aa		29.12	■■■□□ 2.25
PSMD11-206	ENST00000578213	BAG6	P46379	1132 aa		29.12	■■■□□ 2.25
PSMD11-206	ENST00000578213	CIC	Q96RK0	1608 aa	Predicted RBP	29.12	■■■□□ 2.25
PSMD11-206	ENST00000578213	APBA3	O96018	575 aa		29.11	■■■□□ 2.25
PSMD11-206	ENST00000578213	TAF7	Q15545	349 aa	Predicted RBP	29.09	■■■□□ 2.25
PSMD11-206	ENST00000578213	BABAM1	Q9NWV8	329 aa		29.09	■■■□□ 2.25
PSMD11-206	ENST00000578213	PALLD	Q8WX93	1383 aa		29.09	■■■□□ 2.25
PSMD11-206	ENST00000578213	TAF1L	Q8IZX4	1826 aa		29.08	■■■□□ 2.25
PSMD11-206	ENST00000578213	WWC1	Q8IX03	1113 aa		29.08	■■■□□ 2.25
PSMD11-206	ENST00000578213	THUMPD2	Q9BTF0	503 aa	Known RBP	29.08	■■■□□ 2.25
PSMD11-206	ENST00000578213	ATG3	Q9NT62	314 aa		29.06	■■■□□ 2.24
PSMD11-206	ENST00000578213	KCP	Q6ZWJ8	1503 aa		29.05	■■■□□ 2.24
PSMD11-206	ENST00000578213	BTBD11	A6QL63	1104 aa		29.05	■■■□□ 2.24
PSMD11-206	ENST00000578213	ASAP1	Q9ULH1	1129 aa		29.05	■■■□□ 2.24
PSMD11-206	ENST00000578213	IL16	Q14005	1332 aa		29.04	■■■□□ 2.24
PSMD11-206	ENST00000578213	NUP188	Q5SRE5	1749 aa		29.04	■■■□□ 2.24
PSMD11-206	ENST00000578213	SOCS7	O14512	581 aa		29.04	■■■□□ 2.24
PSMD11-206	ENST00000578213	C5	P01031	1676 aa		29.04	■■■□□ 2.24
PSMD11-206	ENST00000578213	HMGB2	P26583	209 aa	Known RBP	29.03	■■■□□ 2.24
PSMD11-206	ENST00000578213	ZNF790	Q6PG37	636 aa		29.03	■■■□□ 2.24
PSMD11-206	ENST00000578213	WDR63	Q8IWG1	891 aa		29.03	■■■□□ 2.24
PSMD11-206	ENST00000578213	TTC5	Q8N0Z6	440 aa		29.03	■■■□□ 2.24
PSMD11-206	ENST00000578213	IFT57	Q9NWB7	429 aa		29.02	■■■□□ 2.24
PSMD11-206	ENST00000578213	COL5A3	P25940	1745 aa	Predicted RBP	29.02	■■■□□ 2.24
PSMD11-206	ENST00000578213	ZNF521	Q96K83	1311 aa		29.01	■■■□□ 2.23
PSMD11-206	ENST00000578213	TJP1	Q07157	1748 aa		29.01	■■■□□ 2.23
PSMD11-206	ENST00000578213	SLC27A3	Q5K4L6	730 aa		29.01	■■■□□ 2.23
PSMD11-206	ENST00000578213	CFAP44	Q96MT7	982 aa		29.01	■■■□□ 2.23
PSMD11-206	ENST00000578213	CAMKK2	Q96RR4	588 aa		29.01	■■■□□ 2.23
PSMD11-206	ENST00000578213	GNAI1	P63096	354 aa		29	■■■□□ 2.23
PSMD11-206	ENST00000578213	LAMB4	A4D0S4	1761 aa		29	■■■□□ 2.23
PSMD11-206	ENST00000578213	EN1	Q05925	392 aa	Predicted RBP	28.99	■■■□□ 2.23
PSMD11-206	ENST00000578213	SALL2	Q9Y467	1007 aa	Predicted RBP	28.99	■■■□□ 2.23
PSMD11-206	ENST00000578213	CHL1	O00533	1208 aa		28.98	■■■□□ 2.23
PSMD11-206	ENST00000578213	SLC39A6	Q13433	755 aa		28.98	■■■□□ 2.23
PSMD11-206	ENST00000578213	DEFB132	Q7Z7B7	95 aa		28.98	■■■□□ 2.23
PSMD11-206	ENST00000578213	TSPYL4	Q9UJ04	414 aa		28.98	■■■□□ 2.23
PSMD11-206	ENST00000578213	SENP3-EIF4A1	A0A087X0R7	540 aa		28.97	■■■□□ 2.23
PSMD11-206	ENST00000578213	LOC102724428	A0A0B4J2F2	783 aa		28.97	■■■□□ 2.23
PSMD11-206	ENST00000578213	ZNF853	P0CG23	659 aa		28.97	■■■□□ 2.23
PSMD11-206	ENST00000578213	SIK1	P57059	783 aa		28.97	■■■□□ 2.23
PSMD11-206	ENST00000578213	TXNRD1	Q16881	649 aa		28.97	■■■□□ 2.23
PSMD11-206	ENST00000578213	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.96	■■■□□ 2.23
PSMD11-206	ENST00000578213	VSIG10	Q8N0Z9	540 aa		28.96	■■■□□ 2.23
PSMD11-206	ENST00000578213	FMNL2	Q96PY5	1086 aa		28.95	■■■□□ 2.22
PSMD11-206	ENST00000578213	CCNL1	Q9UK58	526 aa	Predicted RBP	28.95	■■■□□ 2.22
PSMD11-206	ENST00000578213	HEG1	Q9ULI3	1381 aa		28.94	■■■□□ 2.22
PSMD11-206	ENST00000578213	EZH2	Q15910	746 aa	Known RBP	28.94	■■■□□ 2.22
PSMD11-206	ENST00000578213	PTCD1	O75127	700 aa	Known RBP	28.93	■■■□□ 2.22
PSMD11-206	ENST00000578213	RBM42	Q9BTD8	480 aa	Known RBP	28.93	■■■□□ 2.22
PSMD11-206	ENST00000578213	C4B	P0C0L5	1744 aa		28.92	■■■□□ 2.22
PSMD11-206	ENST00000578213	PROM2	Q8N271	834 aa		28.92	■■■□□ 2.22
PSMD11-206	ENST00000578213	ZNF496	Q96IT1	587 aa	Predicted RBP	28.92	■■■□□ 2.22
PSMD11-206	ENST00000578213	MIS18A	Q9NYP9	233 aa		28.92	■■■□□ 2.22
PSMD11-206	ENST00000578213	LAS1L	Q9Y4W2	734 aa	Known RBP	28.92	■■■□□ 2.22
PSMD11-206	ENST00000578213	QSER1	Q2KHR3	1735 aa		28.91	■■■□□ 2.22
PSMD11-206	ENST00000578213	ZBED9	Q6R2W3	1325 aa		28.91	■■■□□ 2.22
PSMD11-206	ENST00000578213	ATP6V1A	P38606	617 aa		28.9	■■■□□ 2.22
PSMD11-206	ENST00000578213	GOLGA2	Q08379	1002 aa		28.9	■■■□□ 2.22
PSMD11-206	ENST00000578213	MBIP	Q9NS73	344 aa		28.9	■■■□□ 2.22
PSMD11-206	ENST00000578213	MYH14	Q7Z406	1995 aa	Known RBP	28.9	■■■□□ 2.22
PSMD11-206	ENST00000578213	KCNQ3	O43525	872 aa		28.89	■■■□□ 2.22
PSMD11-206	ENST00000578213	EIF4A1	P60842	406 aa	Known RBP	28.89	■■■□□ 2.22
PSMD11-206	ENST00000578213	SLC4A9	Q96Q91	983 aa		28.88	■■■□□ 2.21
PSMD11-206	ENST00000578213	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.88	■■■□□ 2.21
PSMD11-206	ENST00000578213	MYH16	Q9H6N6	1097 aa		28.88	■■■□□ 2.21
PSMD11-206	ENST00000578213	LRRC4B	Q9NT99	713 aa		28.88	■■■□□ 2.21
PSMD11-206	ENST00000578213	UBR3	Q6ZT12	1888 aa		28.87	■■■□□ 2.21
PSMD11-206	ENST00000578213	TUBGCP6	Q96RT7	1819 aa		28.86	■■■□□ 2.21
PSMD11-206	ENST00000578213		E9PSI1	815 aa		28.86	■■■□□ 2.21
PSMD11-206	ENST00000578213	SNRPA1	P09661	255 aa	Known RBP	28.86	■■■□□ 2.21
PSMD11-206	ENST00000578213	CACNA1F	O60840	1977 aa		28.85	■■■□□ 2.21
PSMD11-206	ENST00000578213	ITPK1	Q13572	414 aa		28.84	■■■□□ 2.21
PSMD11-206	ENST00000578213	SOS1	Q07889	1333 aa	Predicted RBP	28.84	■■■□□ 2.21
PSMD11-206	ENST00000578213	FANCI	Q9NVI1	1328 aa		28.84	■■■□□ 2.21
PSMD11-206	ENST00000578213	HOXB7	P09629	217 aa		28.83	■■■□□ 2.21
PSMD11-206	ENST00000578213	GIGYF1	O75420	1035 aa	Predicted RBP	28.82	■■■□□ 2.2
PSMD11-206	ENST00000578213	CNTNAP4	Q9C0A0	1308 aa		28.82	■■■□□ 2.2
PSMD11-206	ENST00000578213	STARD3NL	O95772	234 aa		28.81	■■■□□ 2.2
PSMD11-206	ENST00000578213	DNAJC10	Q8IXB1	793 aa		28.81	■■■□□ 2.2
PSMD11-206	ENST00000578213	SLFN5	Q08AF3	891 aa		28.8	■■■□□ 2.2
PSMD11-206	ENST00000578213	RC3H1	Q5TC82	1133 aa	Known RBP	28.8	■■■□□ 2.2
PSMD11-206	ENST00000578213	LINC00116	Q8NCU8	138 aa		28.8	■■■□□ 2.2
PSMD11-206	ENST00000578213	TSR2	Q969E8	191 aa	Known RBP	28.8	■■■□□ 2.2
PSMD11-206	ENST00000578213	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.8	■■■□□ 2.2
PSMD11-206	ENST00000578213	KCNQ4	P56696	695 aa		28.79	■■■□□ 2.2
PSMD11-206	ENST00000578213	NBPF14	Q5TI25	921 aa		28.79	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms