RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 NFATC2IPQ8NCF5 419 aa21.91■■□□□ 1.1
CDK5RAP3-207ENST00000578134 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
CDK5RAP3-207ENST00000578134 MRC1P22897 1456 aa21.9■■□□□ 1.1
CDK5RAP3-207ENST00000578134 A0A0G2JS52 829 aa21.9■■□□□ 1.1
CDK5RAP3-207ENST00000578134 MYT1Q01538 1121 aa21.9■■□□□ 1.1
CDK5RAP3-207ENST00000578134 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
CDK5RAP3-207ENST00000578134 RCAN3Q9UKA8 241 aa21.9■■□□□ 1.1
CDK5RAP3-207ENST00000578134 SEPT12Q8IYM1 358 aa21.89■■□□□ 1.09
CDK5RAP3-207ENST00000578134 RXRBP28702 533 aa21.88■■□□□ 1.09
CDK5RAP3-207ENST00000578134 MIS18AQ9NYP9 233 aa21.88■■□□□ 1.09
CDK5RAP3-207ENST00000578134 TMOD3Q9NYL9 352 aa21.87■■□□□ 1.09
CDK5RAP3-207ENST00000578134 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
CDK5RAP3-207ENST00000578134 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
CDK5RAP3-207ENST00000578134 BCL9O00512 1426 aa21.86■■□□□ 1.09
CDK5RAP3-207ENST00000578134 SIPA1L3O60292 1781 aaPredicted RBP21.85■■□□□ 1.09
CDK5RAP3-207ENST00000578134 HOXB7P09629 217 aa21.85■■□□□ 1.09
CDK5RAP3-207ENST00000578134 TWISTNBQ3B726 338 aaPredicted RBP21.85■■□□□ 1.09
CDK5RAP3-207ENST00000578134 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
CDK5RAP3-207ENST00000578134 TTC5Q8N0Z6 440 aa21.85■■□□□ 1.09
CDK5RAP3-207ENST00000578134 VAMP4O75379 141 aa21.84■■□□□ 1.09
CDK5RAP3-207ENST00000578134 EIF4A1P60842 406 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-207ENST00000578134 ALDH1L2Q3SY69 923 aa21.84■■□□□ 1.09
CDK5RAP3-207ENST00000578134 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.09
CDK5RAP3-207ENST00000578134 RGS17Q9UGC6 210 aaPredicted RBP21.82■■□□□ 1.08
CDK5RAP3-207ENST00000578134 RARSP54136 660 aaKnown RBP21.81■■□□□ 1.08
CDK5RAP3-207ENST00000578134 PIGBQ92521 554 aa21.81■■□□□ 1.08
CDK5RAP3-207ENST00000578134 KDM3BQ7LBC6 1761 aa21.81■■□□□ 1.08
CDK5RAP3-207ENST00000578134 HEG1Q9ULI3 1381 aa21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 BRPF1P55201 1214 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 KRT27Q7Z3Y8 459 aa21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 FMNL2Q96PY5 1086 aa21.8■■□□□ 1.08
CDK5RAP3-207ENST00000578134 TSPYL6Q8N831 410 aa21.79■■□□□ 1.08
CDK5RAP3-207ENST00000578134 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
CDK5RAP3-207ENST00000578134 RNF123Q5XPI4 1314 aa21.79■■□□□ 1.08
CDK5RAP3-207ENST00000578134 FAM196AQ6ZSG2 479 aa21.78■■□□□ 1.08
CDK5RAP3-207ENST00000578134 ELL2O00472 640 aaPredicted RBP21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 KCNQ3O43525 872 aa21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 GIGYF1O75420 1035 aaPredicted RBP21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 SYTL4Q96C24 671 aaPredicted RBP21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
CDK5RAP3-207ENST00000578134 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
CDK5RAP3-207ENST00000578134 POTEAQ6S8J7 498 aa21.76■■□□□ 1.07
CDK5RAP3-207ENST00000578134 VSIG10Q8N0Z9 540 aa21.76■■□□□ 1.07
CDK5RAP3-207ENST00000578134 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
CDK5RAP3-207ENST00000578134 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
CDK5RAP3-207ENST00000578134 ITGB4P16144 1822 aa21.75■■□□□ 1.07
CDK5RAP3-207ENST00000578134 KRT24Q2M2I5 525 aa21.74■■□□□ 1.07
CDK5RAP3-207ENST00000578134 ACSBG1Q96GR2 724 aa21.74■■□□□ 1.07
CDK5RAP3-207ENST00000578134 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
CDK5RAP3-207ENST00000578134 ATG3Q9NT62 314 aa21.74■■□□□ 1.07
CDK5RAP3-207ENST00000578134 SSH1Q8WYL5 1049 aa21.73■■□□□ 1.07
CDK5RAP3-207ENST00000578134 STK31Q9BXU1 1019 aa21.73■■□□□ 1.07
CDK5RAP3-207ENST00000578134 SMC4Q9NTJ3 1288 aa21.73■■□□□ 1.07
CDK5RAP3-207ENST00000578134 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
CDK5RAP3-207ENST00000578134 IPO8O15397 1037 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-207ENST00000578134 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
CDK5RAP3-207ENST00000578134 PAPPAQ13219 1627 aa21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 BCAR3O75815 825 aa21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 MS4A1P11836 297 aa21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 RRP1P56182 461 aaKnown RBP21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 HDGFL1Q5TGJ6 251 aa21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
CDK5RAP3-207ENST00000578134 NEFLP07196 543 aa21.7■■□□□ 1.06
CDK5RAP3-207ENST00000578134 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
CDK5RAP3-207ENST00000578134 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
CDK5RAP3-207ENST00000578134 BCL11BQ9C0K0 894 aaPredicted RBP21.7■■□□□ 1.06
CDK5RAP3-207ENST00000578134 KAT6BQ8WYB5 2073 aa21.69■■□□□ 1.06
CDK5RAP3-207ENST00000578134 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
CDK5RAP3-207ENST00000578134 KCNQ2O43526 872 aa21.68■■□□□ 1.06
CDK5RAP3-207ENST00000578134 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
CDK5RAP3-207ENST00000578134 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-207ENST00000578134 KCPQ6ZWJ8 1503 aa21.67■■□□□ 1.06
CDK5RAP3-207ENST00000578134 ERBB4Q15303 1308 aa21.67■■□□□ 1.06
CDK5RAP3-207ENST00000578134 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
CDK5RAP3-207ENST00000578134 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
CDK5RAP3-207ENST00000578134 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
CDK5RAP3-207ENST00000578134 BRWD3Q6RI45 1802 aa21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 RGS12O14924 1447 aa21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 PDE3AQ14432 1141 aa21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
CDK5RAP3-207ENST00000578134 PTPRCP08575 1304 aa21.65■■□□□ 1.06
CDK5RAP3-207ENST00000578134 STARD3NLO95772 234 aa21.65■■□□□ 1.06
CDK5RAP3-207ENST00000578134 FAM182BQ5T319 152 aa21.65■■□□□ 1.06
CDK5RAP3-207ENST00000578134 BCL2L13Q9BXK5 485 aa21.65■■□□□ 1.06
CDK5RAP3-207ENST00000578134 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
CDK5RAP3-207ENST00000578134 HYPKQ9NX55 129 aa21.64■■□□□ 1.05
CDK5RAP3-207ENST00000578134 NOB1Q9ULX3 412 aaKnown RBP21.64■■□□□ 1.05
CDK5RAP3-207ENST00000578134 USP16Q9Y5T5 823 aa21.64■■□□□ 1.05
CDK5RAP3-207ENST00000578134 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
CDK5RAP3-207ENST00000578134 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
CDK5RAP3-207ENST00000578134 ERICH6BQ5W0A0 696 aa21.63■■□□□ 1.05
CDK5RAP3-207ENST00000578134 FRAT1Q92837 279 aaPredicted RBP21.63■■□□□ 1.05
CDK5RAP3-207ENST00000578134 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms