RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 IPO9Q96P70 1041 aaKnown RBP34.84■■■■□ 3.17
LIMD2-203ENST00000578067 FLIIQ13045 1269 aa34.83■■■■□ 3.17
LIMD2-203ENST00000578067 SIRT2Q8IXJ6 389 aa34.83■■■■□ 3.17
LIMD2-203ENST00000578067 GCC1Q96CN9 775 aa34.83■■■■□ 3.17
LIMD2-203ENST00000578067 PLEKHG2Q9H7P9 1386 aa34.83■■■■□ 3.17
LIMD2-203ENST00000578067 NUCB1Q02818 461 aa34.82■■■■□ 3.17
LIMD2-203ENST00000578067 HDGFL1Q5TGJ6 251 aa34.82■■■■□ 3.17
LIMD2-203ENST00000578067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.82■■■■□ 3.17
LIMD2-203ENST00000578067 CCT4P50991 539 aaKnown RBP34.82■■■■□ 3.16
LIMD2-203ENST00000578067 CHMP4AQ9BY43 222 aa34.82■■■■□ 3.16
LIMD2-203ENST00000578067 SPG7Q9UQ90 795 aa34.81■■■■□ 3.16
LIMD2-203ENST00000578067 ADAMTS7Q9UKP4 1686 aa34.8■■■■□ 3.16
LIMD2-203ENST00000578067 CACNA1FO60840 1977 aa34.79■■■■□ 3.16
LIMD2-203ENST00000578067 F6X3S4 739 aa34.79■■■■□ 3.16
LIMD2-203ENST00000578067 KCNQ3O43525 872 aa34.79■■■■□ 3.16
LIMD2-203ENST00000578067 VIRMAQ69YN4 1812 aaKnown RBP34.79■■■■□ 3.16
LIMD2-203ENST00000578067 MEGF6O75095 1541 aa34.79■■■■□ 3.16
LIMD2-203ENST00000578067 FKBP5Q13451 457 aaPredicted RBP34.78■■■■□ 3.16
LIMD2-203ENST00000578067 SLC4A10Q6U841 1118 aa34.78■■■■□ 3.16
LIMD2-203ENST00000578067 PRDM11Q9NQV5 511 aa34.78■■■■□ 3.16
LIMD2-203ENST00000578067 CHD1LQ86WJ1 897 aa34.76■■■■□ 3.15
LIMD2-203ENST00000578067 MEIS3Q99687 375 aa34.75■■■■□ 3.15
LIMD2-203ENST00000578067 NHSL1Q5SYE7 1610 aa34.75■■■■□ 3.15
LIMD2-203ENST00000578067 PHKG2P15735 406 aa34.74■■■■□ 3.15
LIMD2-203ENST00000578067 RPAP2Q8IXW5 612 aaPredicted RBP34.74■■■■□ 3.15
LIMD2-203ENST00000578067 ANKRD44Q8N8A2 993 aa34.74■■■■□ 3.15
LIMD2-203ENST00000578067 EIF2S2P20042 333 aaKnown RBP34.73■■■■□ 3.15
LIMD2-203ENST00000578067 SIPA1L3O60292 1781 aaPredicted RBP34.73■■■■□ 3.15
LIMD2-203ENST00000578067 ATP10DQ9P241 1426 aa34.73■■■■□ 3.15
LIMD2-203ENST00000578067 IFNL2Q8IZJ0 200 aa34.72■■■■□ 3.15
LIMD2-203ENST00000578067 LNPKQ9C0E8 428 aa34.71■■■■□ 3.15
LIMD2-203ENST00000578067 ANKRD45Q5TZF3 282 aa34.71■■■■□ 3.15
LIMD2-203ENST00000578067 WDR17Q8IZU2 1322 aa34.7■■■■□ 3.15
LIMD2-203ENST00000578067 CEP85Q6P2H3 762 aa34.69■■■■□ 3.14
LIMD2-203ENST00000578067 HEG1Q9ULI3 1381 aa34.69■■■■□ 3.14
LIMD2-203ENST00000578067 KDM6AO15550 1401 aaPredicted RBP34.69■■■■□ 3.14
LIMD2-203ENST00000578067 ABCA3Q99758 1704 aa34.69■■■■□ 3.14
LIMD2-203ENST00000578067 PHAXQ9H814 394 aaKnown RBP34.68■■■■□ 3.14
LIMD2-203ENST00000578067 PXDNLA1KZ92 1463 aa34.67■■■■□ 3.14
LIMD2-203ENST00000578067 DCTPP1Q9H773 170 aa34.67■■■■□ 3.14
LIMD2-203ENST00000578067 NOP58Q9Y2X3 529 aaKnown RBP34.67■■■■□ 3.14
LIMD2-203ENST00000578067 SLC52A2Q9HAB3 445 aa34.67■■■■□ 3.14
LIMD2-203ENST00000578067 SCN11AQ9UI33 1791 aa34.67■■■■□ 3.14
LIMD2-203ENST00000578067 PKD1L3Q7Z443 1732 aa34.67■■■■□ 3.14
LIMD2-203ENST00000578067 GIGYF1O75420 1035 aaPredicted RBP34.66■■■■□ 3.14
LIMD2-203ENST00000578067 ERICH6Q7L0X2 663 aa34.66■■■■□ 3.14
LIMD2-203ENST00000578067 CHPF2Q9P2E5 772 aa34.66■■■■□ 3.14
LIMD2-203ENST00000578067 ZBTB47Q9UFB7 747 aaPredicted RBP34.65■■■■□ 3.14
LIMD2-203ENST00000578067 COL5A2P05997 1499 aaPredicted RBP34.65■■■■□ 3.14
LIMD2-203ENST00000578067 TOM1L2Q6ZVM7 507 aa34.64■■■■□ 3.14
LIMD2-203ENST00000578067 CYP27B1O15528 508 aa34.64■■■■□ 3.14
LIMD2-203ENST00000578067 DCAF5Q96JK2 942 aa34.64■■■■□ 3.14
LIMD2-203ENST00000578067 HSP90AB1P08238 724 aaKnown RBP34.62■■■■□ 3.13
LIMD2-203ENST00000578067 GNAI3P08754 354 aa34.62■■■■□ 3.13
LIMD2-203ENST00000578067 DBF4Q9UBU7 674 aaPredicted RBP34.62■■■■□ 3.13
LIMD2-203ENST00000578067 N4BP2Q86UW6 1770 aaPredicted RBP34.61■■■■□ 3.13
LIMD2-203ENST00000578067 DDRGK1Q96HY6 314 aa34.61■■■■□ 3.13
LIMD2-203ENST00000578067 SEC24BO95487 1268 aa34.6■■■■□ 3.13
LIMD2-203ENST00000578067 GNAI2P04899 355 aa34.6■■■■□ 3.13
LIMD2-203ENST00000578067 NFATC2IPQ8NCF5 419 aa34.6■■■■□ 3.13
LIMD2-203ENST00000578067 ZNF790Q6PG37 636 aa34.59■■■■□ 3.13
LIMD2-203ENST00000578067 HMMRO75330 724 aa34.58■■■■□ 3.13
LIMD2-203ENST00000578067 MRC1P22897 1456 aa34.58■■■■□ 3.13
LIMD2-203ENST00000578067 PARP4Q9UKK3 1724 aaKnown RBP34.57■■■■□ 3.12
LIMD2-203ENST00000578067 CARD10Q9BWT7 1032 aa34.57■■■■□ 3.12
LIMD2-203ENST00000578067 SLC39A6Q13433 755 aa34.55■■■■□ 3.12
LIMD2-203ENST00000578067 PRAMEF22A3QJZ6 481 aa34.54■■■■□ 3.12
LIMD2-203ENST00000578067 ANXA1P04083 346 aa34.54■■■■□ 3.12
LIMD2-203ENST00000578067 ZCRB1Q8TBF4 217 aaKnown RBP34.54■■■■□ 3.12
LIMD2-203ENST00000578067 SRCIN1Q9C0H9 1055 aa34.54■■■■□ 3.12
LIMD2-203ENST00000578067 EVA1CP58658 441 aa34.53■■■■□ 3.12
LIMD2-203ENST00000578067 DNAAF4Q8WXU2 420 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 ANP32EQ9BTT0 268 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 USP44Q9H0E7 712 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 PCDH11XQ9BZA7 1347 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 PCDH11YQ9BZA8 1340 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 PI4KAP2A4QPH2 592 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 PI4KAP1Q8N8J0 262 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 STRN4Q9NRL3 753 aa34.52■■■■□ 3.12
LIMD2-203ENST00000578067 BMP2KLQ5H9B9 411 aa34.51■■■■□ 3.12
LIMD2-203ENST00000578067 UPF2Q9HAU5 1272 aaKnown RBP34.51■■■■□ 3.12
LIMD2-203ENST00000578067 HYPKQ9NX55 129 aa34.5■■■■□ 3.11
LIMD2-203ENST00000578067 IL2RBP14784 551 aa34.5■■■■□ 3.11
LIMD2-203ENST00000578067 LARP1Q6PKG0 1096 aaKnown RBP34.5■■■■□ 3.11
LIMD2-203ENST00000578067 CABP4P57796 275 aa34.49■■■■□ 3.11
LIMD2-203ENST00000578067 ROBO1Q9Y6N7 1651 aa34.49■■■■□ 3.11
LIMD2-203ENST00000578067 ADCY9O60503 1353 aa34.49■■■■□ 3.11
LIMD2-203ENST00000578067 BEND3Q5T5X7 828 aa34.48■■■■□ 3.11
LIMD2-203ENST00000578067 UBTFL1P0CB47 393 aaPredicted RBP34.48■■■■□ 3.11
LIMD2-203ENST00000578067 PROSER3Q2NL68 480 aa34.48■■■■□ 3.11
LIMD2-203ENST00000578067 TTC5Q8N0Z6 440 aa34.47■■■■□ 3.11
LIMD2-203ENST00000578067 DDX21Q9NR30 783 aaKnown RBP eCLIP34.47■■■■□ 3.11
LIMD2-203ENST00000578067 ATP8B2P98198 1209 aa34.47■■■■□ 3.11
LIMD2-203ENST00000578067 ZNF496Q96IT1 587 aaPredicted RBP34.46■■■■□ 3.11
LIMD2-203ENST00000578067 LRRFIP2Q9Y608 721 aaKnown RBP34.46■■■■□ 3.11
LIMD2-203ENST00000578067 LTBP4Q8N2S1 1624 aa34.46■■■■□ 3.11
LIMD2-203ENST00000578067 AHDC1Q5TGY3 1603 aaPredicted RBP34.45■■■■□ 3.11
LIMD2-203ENST00000578067 KSR2Q6VAB6 950 aa34.44■■■■□ 3.1
LIMD2-203ENST00000578067 PLEKHM2Q8IWE5 1019 aa34.43■■■■□ 3.1
LIMD2-203ENST00000578067 PDIA6Q15084 440 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms