RNA–Protein interactions for RNA: ENST00000577968.1

CCDC144NL-AS1-210, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 821 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-210ENST00000577968 USP17L5A8MUK1 530 aa10.11□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 NCOA4Q13772 614 aa10.11□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 TLR1Q15399 786 aa10.11□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 RIPOR1Q6ZS17 1223 aa10.1□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 RHBDD1Q8TEB9 315 aa10.1□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 UNC13AQ9UPW8 1703 aa10.1□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 PCDHGA11Q9Y5H2 935 aa10.09□□□□□ -0.79
CCDC144NL-AS1-210ENST00000577968 A0A1B0GTH6 734 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 F11P03951 625 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 GTF2IP78347 998 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 TRIM50Q86XT4 487 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 ATP9BO43861 1147 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 STAU1O95793 577 aaKnown RBP10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 SMTNP53814 917 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 KRT76Q01546 638 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 C4orf17Q53FE4 359 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 GLMNQ92990 594 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 UCN2Q96RP3 112 aa10.07□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 BACH1O14867 736 aa10.06□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 SLC4A9Q96Q91 983 aa10.06□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 USP17L3A6NCW0 530 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 USP17L4A6NCW7 530 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 PHKA2P46019 1235 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 ATP1A2P50993 1020 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 PSME1Q06323 249 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 DBN1Q16643 649 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 TBC1D9Q6ZT07 1266 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 USP17L1Q7RTZ2 530 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 DEPDC4Q8N2C3 294 aa10.05□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 MYO15BQ96JP2 1530 aa10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 LBRQ14739 615 aaKnown RBP10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 TRERF1Q96PN7 1200 aa10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 NIFKQ9BYG3 293 aaKnown RBP10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 NUCKS1Q9H1E3 243 aaKnown RBP10.04□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 A6NJY4 79 aa10.03□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 MTFR1Q15390 333 aa10.03□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
CCDC144NL-AS1-210ENST00000577968 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 C1orf216Q8TAB5 229 aa10.01□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 GTPBP3Q969Y2 492 aaKnown RBP10.01□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 MSX1P28360 303 aa10□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 PLA2G4AP47712 749 aa10□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 SRSF11Q05519 484 aaKnown RBP10□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 GPAMQ9HCL2 828 aa10□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 ZNF358Q9NW07 568 aa10□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 GAS6Q14393 721 aa9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 MKRN1Q9UHC7 482 aaKnown RBP9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 IQSEC3Q9UPP2 1182 aaPredicted RBP9.99□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 EFHC2Q5JST6 749 aa9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 GPR25O00155 361 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CLDN10P78369 228 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 CCDC102BQ68D86 513 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 ZNF295-AS1Q8N0V1 137 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 OGFOD1Q8N543 542 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 SCHIP1Q9P0W5 487 aaPredicted RBP9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 NSFL1CQ9UNZ2 370 aaKnown RBP9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
CCDC144NL-AS1-210ENST00000577968 ZBTB7BO15156 539 aaPredicted RBP9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 PPP1R12CQ9BZL4 782 aa9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 RUBCNLQ9H714 662 aa9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 ZDHHC3Q9NYG2 299 aa9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 RBM19Q9Y4C8 960 aaKnown RBP9.96□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 M0R2N6 131 aa9.95□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 ZNF385CQ66K41 422 aaPredicted RBP9.95□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 SIX5Q8N196 739 aa9.95□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 AIDAQ96BJ3 306 aa9.95□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 THBS1P07996 1170 aa9.94□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 TATP17735 454 aaPredicted RBP9.94□□□□□ -0.82
CCDC144NL-AS1-210ENST00000577968 EPHA4P54764 986 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms