RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 ASAP1Q9ULH1 1129 aa11.28□□□□□ -0.6
DDX42-204ENST00000577940 SSFA2P28290 1259 aa11.27□□□□□ -0.6
DDX42-204ENST00000577940 IL13P35225 146 aa11.27□□□□□ -0.6
DDX42-204ENST00000577940 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.6
DDX42-204ENST00000577940 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.6
DDX42-204ENST00000577940 ATG3Q9NT62 314 aa11.27□□□□□ -0.6
DDX42-204ENST00000577940 BTAF1O14981 1849 aa11.27□□□□□ -0.61
DDX42-204ENST00000577940 PAPPAQ13219 1627 aa11.27□□□□□ -0.61
DDX42-204ENST00000577940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
DDX42-204ENST00000577940 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
DDX42-204ENST00000577940 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 MYOM1P52179 1685 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 GNPATO15228 680 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 GRIN3BO60391 1043 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 PHF14O94880 888 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
DDX42-204ENST00000577940 LINC00116Q8NCU8 138 aa11.26□□□□□ -0.61
DDX42-204ENST00000577940 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
DDX42-204ENST00000577940 CC2D1BQ5T0F9 858 aaKnown RBP11.25□□□□□ -0.61
DDX42-204ENST00000577940 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
DDX42-204ENST00000577940 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
DDX42-204ENST00000577940 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
DDX42-204ENST00000577940 ITPK1Q13572 414 aa11.24□□□□□ -0.61
DDX42-204ENST00000577940 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
DDX42-204ENST00000577940 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
DDX42-204ENST00000577940 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
DDX42-204ENST00000577940 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
DDX42-204ENST00000577940 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
DDX42-204ENST00000577940 KDRP35968 1356 aa11.23□□□□□ -0.61
DDX42-204ENST00000577940 KAT6BQ8WYB5 2073 aa11.22□□□□□ -0.61
DDX42-204ENST00000577940 NLGN1Q8N2Q7 840 aa11.22□□□□□ -0.61
DDX42-204ENST00000577940 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
DDX42-204ENST00000577940 DOT1LQ8TEK3 1739 aa11.22□□□□□ -0.61
DDX42-204ENST00000577940 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
DDX42-204ENST00000577940 RGPD2P0DJD1 1756 aa11.2□□□□□ -0.62
DDX42-204ENST00000577940 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
DDX42-204ENST00000577940 RPS6KA4O75676 772 aa11.2□□□□□ -0.62
DDX42-204ENST00000577940 HMOX1P09601 288 aa11.2□□□□□ -0.62
DDX42-204ENST00000577940 RFC4P35249 363 aa11.2□□□□□ -0.62
DDX42-204ENST00000577940 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
DDX42-204ENST00000577940 ANP32CO43423 234 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 SMIM5Q71RC9 77 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 SLC4A9Q96Q91 983 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 SLC52A2Q9HAB3 445 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 SHANK3Q9BYB0 1731 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 ANKRD26Q9UPS8 1709 aa11.19□□□□□ -0.62
DDX42-204ENST00000577940 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
DDX42-204ENST00000577940 LY75O60449 1722 aa11.18□□□□□ -0.62
DDX42-204ENST00000577940 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 MMP10P09238 476 aa11.18□□□□□ -0.62
DDX42-204ENST00000577940 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX42-204ENST00000577940 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
DDX42-204ENST00000577940 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
DDX42-204ENST00000577940 CRKLP46109 303 aaKnown RBP11.17□□□□□ -0.62
DDX42-204ENST00000577940 TGFB2P61812 414 aa11.17□□□□□ -0.62
DDX42-204ENST00000577940 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
DDX42-204ENST00000577940 LGR6Q9HBX8 967 aa11.17□□□□□ -0.62
DDX42-204ENST00000577940 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
DDX42-204ENST00000577940 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
DDX42-204ENST00000577940 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
DDX42-204ENST00000577940 GYS1P13807 737 aa11.15□□□□□ -0.62
DDX42-204ENST00000577940 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.62
DDX42-204ENST00000577940 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
DDX42-204ENST00000577940 C4BP0C0L5 1744 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 ZPR1O75312 459 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 STARD3NLO95772 234 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 TEFQ10587 303 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 QSER1Q2KHR3 1735 aa11.14□□□□□ -0.63
DDX42-204ENST00000577940 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
DDX42-204ENST00000577940 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
DDX42-204ENST00000577940 TEX13AQ9BXU3 409 aaPredicted RBP11.13□□□□□ -0.63
DDX42-204ENST00000577940 UTRNP46939 3433 aa11.12□□□□□ -0.63
DDX42-204ENST00000577940 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
DDX42-204ENST00000577940 C5P01031 1676 aa11.12□□□□□ -0.63
DDX42-204ENST00000577940 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
DDX42-204ENST00000577940 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
DDX42-204ENST00000577940 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
DDX42-204ENST00000577940 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
DDX42-204ENST00000577940 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.633e-10■■■□□ 15.2
DDX42-204ENST00000577940 USP42Q9H9J4 1324 aaKnown RBP11.11□□□□□ -0.63
DDX42-204ENST00000577940 A0A087WZG4 1122 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 A0A0G2JLW4 131 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 FCHSD2O94868 740 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 C1QTNF8P60827 252 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 FKBP8Q14318 412 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 MIER1Q8N108 512 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
DDX42-204ENST00000577940 RTF1Q92541 710 aaKnown RBP11.1□□□□□ -0.63
DDX42-204ENST00000577940 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms