RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 SIK1P57059 783 aa13.7□□□□□ -0.22
SUPT6H-204ENST00000577939 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
SUPT6H-204ENST00000577939 ARXQ96QS3 562 aa13.7□□□□□ -0.22
SUPT6H-204ENST00000577939 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
SUPT6H-204ENST00000577939 CABP4P57796 275 aa13.69□□□□□ -0.22
SUPT6H-204ENST00000577939 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
SUPT6H-204ENST00000577939 TJP1Q07157 1748 aa13.68□□□□□ -0.22
SUPT6H-204ENST00000577939 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
SUPT6H-204ENST00000577939 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
SUPT6H-204ENST00000577939 SSFA2P28290 1259 aa13.67□□□□□ -0.22
SUPT6H-204ENST00000577939 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
SUPT6H-204ENST00000577939 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
SUPT6H-204ENST00000577939 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
SUPT6H-204ENST00000577939 UBR2Q8IWV8 1755 aa13.67□□□□□ -0.22
SUPT6H-204ENST00000577939 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
SUPT6H-204ENST00000577939 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
SUPT6H-204ENST00000577939 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
SUPT6H-204ENST00000577939 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
SUPT6H-204ENST00000577939 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
SUPT6H-204ENST00000577939 HMOX1P09601 288 aa13.65□□□□□ -0.22
SUPT6H-204ENST00000577939 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
SUPT6H-204ENST00000577939 GNPATO15228 680 aa13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
SUPT6H-204ENST00000577939 PHF14O94880 888 aa13.63□□□□□ -0.23
SUPT6H-204ENST00000577939 ADRA2BP18089 450 aa13.63□□□□□ -0.23
SUPT6H-204ENST00000577939 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
SUPT6H-204ENST00000577939 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
SUPT6H-204ENST00000577939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.62□□□□□ -0.23
SUPT6H-204ENST00000577939 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
SUPT6H-204ENST00000577939 NEFMP07197 916 aa13.61□□□□□ -0.23
SUPT6H-204ENST00000577939 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
SUPT6H-204ENST00000577939 SLC52A2Q9HAB3 445 aa13.61□□□□□ -0.23
SUPT6H-204ENST00000577939 KIF13BQ9NQT8 1826 aa13.61□□□□□ -0.23
SUPT6H-204ENST00000577939 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
SUPT6H-204ENST00000577939 YY1P25490 414 aa13.6□□□□□ -0.23
SUPT6H-204ENST00000577939 ITPK1Q13572 414 aa13.6□□□□□ -0.23
SUPT6H-204ENST00000577939 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
SUPT6H-204ENST00000577939 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
SUPT6H-204ENST00000577939 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 TEFQ10587 303 aa13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 UTRNP46939 3433 aa13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
SUPT6H-204ENST00000577939 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
SUPT6H-204ENST00000577939 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
SUPT6H-204ENST00000577939 GPR162Q16538 588 aa13.58□□□□□ -0.24
SUPT6H-204ENST00000577939 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
SUPT6H-204ENST00000577939 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
SUPT6H-204ENST00000577939 RFC4P35249 363 aa13.57□□□□□ -0.24
SUPT6H-204ENST00000577939 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
SUPT6H-204ENST00000577939 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
SUPT6H-204ENST00000577939 CD2APQ9Y5K6 639 aa13.57□□□□□ -0.24
SUPT6H-204ENST00000577939 LAMB4A4D0S4 1761 aa13.56□□□□□ -0.24
SUPT6H-204ENST00000577939 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
SUPT6H-204ENST00000577939 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
SUPT6H-204ENST00000577939 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
SUPT6H-204ENST00000577939 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
SUPT6H-204ENST00000577939 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
SUPT6H-204ENST00000577939 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
SUPT6H-204ENST00000577939 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
SUPT6H-204ENST00000577939 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
SUPT6H-204ENST00000577939 FCHSD2O94868 740 aa13.54□□□□□ -0.24
SUPT6H-204ENST00000577939 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
SUPT6H-204ENST00000577939 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
SUPT6H-204ENST00000577939 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-204ENST00000577939 BRCA1P38398 1863 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-204ENST00000577939 N4BP2Q86UW6 1770 aaPredicted RBP13.53□□□□□ -0.24
SUPT6H-204ENST00000577939 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
SUPT6H-204ENST00000577939 AMIGO3Q86WK7 504 aa13.53□□□□□ -0.24
SUPT6H-204ENST00000577939 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
SUPT6H-204ENST00000577939 CCDC87Q9NVE4 849 aa13.53□□□□□ -0.24
SUPT6H-204ENST00000577939 MMP10P09238 476 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 RALBP1Q15311 655 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 COL15A1P39059 1388 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 KIAA1551Q9HCM1 1747 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 BCORQ6W2J9 1755 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
SUPT6H-204ENST00000577939 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 ZPR1O75312 459 aa13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 STARD3NLO95772 234 aa13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
SUPT6H-204ENST00000577939 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
SUPT6H-204ENST00000577939 USP42Q9H9J4 1324 aaKnown RBP13.5□□□□□ -0.25
SUPT6H-204ENST00000577939 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
SUPT6H-204ENST00000577939 DNAJC10Q8IXB1 793 aa13.5□□□□□ -0.25
SUPT6H-204ENST00000577939 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms