RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
SREBF1-217ENST00000577897 A0A0G2JLW4 131 aa19■□□□□ 0.63
SREBF1-217ENST00000577897 CDCA8Q53HL2 280 aa19■□□□□ 0.63
SREBF1-217ENST00000577897 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
SREBF1-217ENST00000577897 GNPATO15228 680 aa18.99■□□□□ 0.63
SREBF1-217ENST00000577897 FCHSD2O94868 740 aa18.99■□□□□ 0.63
SREBF1-217ENST00000577897 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
SREBF1-217ENST00000577897 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
SREBF1-217ENST00000577897 PCDH10Q9P2E7 1040 aa18.99■□□□□ 0.63
SREBF1-217ENST00000577897 ITGB4P16144 1822 aa18.99■□□□□ 0.63
SREBF1-217ENST00000577897 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
SREBF1-217ENST00000577897 C9orf131Q5VYM1 1079 aa18.98■□□□□ 0.63
SREBF1-217ENST00000577897 KIF13BQ9NQT8 1826 aa18.97■□□□□ 0.63
SREBF1-217ENST00000577897 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
SREBF1-217ENST00000577897 KCPQ6ZWJ8 1503 aa18.97■□□□□ 0.63
SREBF1-217ENST00000577897 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
SREBF1-217ENST00000577897 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
SREBF1-217ENST00000577897 TGFB2P61812 414 aa18.97■□□□□ 0.63
SREBF1-217ENST00000577897 TMF1P82094 1093 aa18.97■□□□□ 0.63
SREBF1-217ENST00000577897 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
SREBF1-217ENST00000577897 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 CYP27B1O15528 508 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 DPEP1P16444 411 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 SIK1P57059 783 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 PIGBQ92521 554 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 KDM2BQ8NHM5 1336 aa18.95■□□□□ 0.62
SREBF1-217ENST00000577897 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
SREBF1-217ENST00000577897 C10orf71Q711Q0 1435 aa18.94■□□□□ 0.62
SREBF1-217ENST00000577897 RRAGCQ9HB90 399 aa18.94■□□□□ 0.62
SREBF1-217ENST00000577897 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
SREBF1-217ENST00000577897 ATP6V1AP38606 617 aa18.92■□□□□ 0.62
SREBF1-217ENST00000577897 ITPK1Q13572 414 aa18.92■□□□□ 0.62
SREBF1-217ENST00000577897 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
SREBF1-217ENST00000577897 RNF181Q9P0P0 153 aa18.91■□□□□ 0.62
SREBF1-217ENST00000577897 TNRC6CQ9HCJ0 1690 aaKnown RBP18.9■□□□□ 0.62
SREBF1-217ENST00000577897 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
SREBF1-217ENST00000577897 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
SREBF1-217ENST00000577897 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
SREBF1-217ENST00000577897 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
SREBF1-217ENST00000577897 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
SREBF1-217ENST00000577897 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
SREBF1-217ENST00000577897 ASAP1Q9ULH1 1129 aa18.88■□□□□ 0.61
SREBF1-217ENST00000577897 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
SREBF1-217ENST00000577897 TRAPPC3LQ5T215 181 aa18.87■□□□□ 0.61
SREBF1-217ENST00000577897 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
SREBF1-217ENST00000577897 RTCBQ9Y3I0 505 aaKnown RBP18.87■□□□□ 0.61
SREBF1-217ENST00000577897 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
SREBF1-217ENST00000577897 INSRP06213 1382 aa18.86■□□□□ 0.61
SREBF1-217ENST00000577897 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-217ENST00000577897 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
SREBF1-217ENST00000577897 FLT4P35916 1363 aa18.84■□□□□ 0.61
SREBF1-217ENST00000577897 KCNA3P22001 575 aa18.84■□□□□ 0.61
SREBF1-217ENST00000577897 DALRD3Q5D0E6 543 aaKnown RBP18.84■□□□□ 0.61
SREBF1-217ENST00000577897 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-217ENST00000577897 ARHGEF1Q92888 912 aaKnown RBP18.83■□□□□ 0.6
SREBF1-217ENST00000577897 DCAF5Q96JK2 942 aa18.83■□□□□ 0.6
SREBF1-217ENST00000577897 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
SREBF1-217ENST00000577897 TESK2Q96S53 571 aa18.83■□□□□ 0.6
SREBF1-217ENST00000577897 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
SREBF1-217ENST00000577897 GYS1P13807 737 aa18.82■□□□□ 0.6
SREBF1-217ENST00000577897 RFC4P35249 363 aa18.82■□□□□ 0.6
SREBF1-217ENST00000577897 FYB1O15117 783 aa18.81■□□□□ 0.6
SREBF1-217ENST00000577897 RALBP1Q15311 655 aa18.81■□□□□ 0.6
SREBF1-217ENST00000577897 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
SREBF1-217ENST00000577897 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
SREBF1-217ENST00000577897 CHRNA5P30532 468 aa18.79■□□□□ 0.6
SREBF1-217ENST00000577897 RASSF7Q02833 373 aa18.79■□□□□ 0.6
SREBF1-217ENST00000577897 KDRP35968 1356 aa18.79■□□□□ 0.6
SREBF1-217ENST00000577897 ADRA2BP18089 450 aa18.78■□□□□ 0.6
SREBF1-217ENST00000577897 SBF1O95248 1867 aa18.77■□□□□ 0.6
SREBF1-217ENST00000577897 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-217ENST00000577897 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-217ENST00000577897 PHKG2P15735 406 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 SLC4A9Q96Q91 983 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 KIF20BQ96Q89 1820 aa18.76■□□□□ 0.59
SREBF1-217ENST00000577897 COL5A3P25940 1745 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-217ENST00000577897 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
SREBF1-217ENST00000577897 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
SREBF1-217ENST00000577897 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
SREBF1-217ENST00000577897 CNTNAP4Q9C0A0 1308 aa18.74■□□□□ 0.59
SREBF1-217ENST00000577897 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
SREBF1-217ENST00000577897 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
SREBF1-217ENST00000577897 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
SREBF1-217ENST00000577897 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
SREBF1-217ENST00000577897 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
SREBF1-217ENST00000577897 DDR1Q08345 913 aa18.73■□□□□ 0.59
SREBF1-217ENST00000577897 MKRN1Q9UHC7 482 aaKnown RBP18.73■□□□□ 0.59
SREBF1-217ENST00000577897 ZC3H4Q9UPT8 1303 aaKnown RBP18.73■□□□□ 0.59
SREBF1-217ENST00000577897 FKBP8Q14318 412 aa18.72■□□□□ 0.59
SREBF1-217ENST00000577897 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
SREBF1-217ENST00000577897 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
SREBF1-217ENST00000577897 FOXN1O15353 648 aa18.71■□□□□ 0.59
SREBF1-217ENST00000577897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
SREBF1-217ENST00000577897 LMNB1P20700 586 aa18.7■□□□□ 0.58
SREBF1-217ENST00000577897 EYA1Q99502 592 aa18.7■□□□□ 0.58
SREBF1-217ENST00000577897 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms