RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 UBR3Q6ZT12 1888 aa19.47■□□□□ 0.71
SMARCD2-205ENST00000577686 ADRA2BP18089 450 aa19.46■□□□□ 0.71
SMARCD2-205ENST00000577686 MAP2P11137 1827 aaKnown RBP19.46■□□□□ 0.71
SMARCD2-205ENST00000577686 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
SMARCD2-205ENST00000577686 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
SMARCD2-205ENST00000577686 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
SMARCD2-205ENST00000577686 CABP4P57796 275 aa19.44■□□□□ 0.7
SMARCD2-205ENST00000577686 ITPK1Q13572 414 aa19.44■□□□□ 0.7
SMARCD2-205ENST00000577686 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
SMARCD2-205ENST00000577686 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
SMARCD2-205ENST00000577686 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
SMARCD2-205ENST00000577686 MMP10P09238 476 aa19.43■□□□□ 0.7
SMARCD2-205ENST00000577686 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
SMARCD2-205ENST00000577686 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
SMARCD2-205ENST00000577686 RC3H1Q5TC82 1133 aaKnown RBP19.42■□□□□ 0.7
SMARCD2-205ENST00000577686 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
SMARCD2-205ENST00000577686 UTRNP46939 3433 aa19.42■□□□□ 0.7
SMARCD2-205ENST00000577686 KDRP35968 1356 aa19.42■□□□□ 0.7
SMARCD2-205ENST00000577686 TGFB2P61812 414 aa19.41■□□□□ 0.7
SMARCD2-205ENST00000577686 PANK3Q9H999 370 aa19.41■□□□□ 0.7
SMARCD2-205ENST00000577686 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
SMARCD2-205ENST00000577686 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
SMARCD2-205ENST00000577686 ADCY9O60503 1353 aa19.41■□□□□ 0.7
SMARCD2-205ENST00000577686 RFC4P35249 363 aa19.4■□□□□ 0.7
SMARCD2-205ENST00000577686 ZNF831Q5JPB2 1677 aa19.4■□□□□ 0.7
SMARCD2-205ENST00000577686 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
SMARCD2-205ENST00000577686 MTHFSP49914 203 aa19.39■□□□□ 0.69
SMARCD2-205ENST00000577686 KNSTRNQ9Y448 316 aa19.39■□□□□ 0.69
SMARCD2-205ENST00000577686 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
SMARCD2-205ENST00000577686 ZNF526Q8TF50 670 aaPredicted RBP19.38■□□□□ 0.69
SMARCD2-205ENST00000577686 PARP3Q9Y6F1 533 aa19.38■□□□□ 0.69
SMARCD2-205ENST00000577686 RPS6KA4O75676 772 aa19.37■□□□□ 0.69
SMARCD2-205ENST00000577686 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
SMARCD2-205ENST00000577686 ARHGEF1Q92888 912 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-205ENST00000577686 CICQ96RK0 1608 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-205ENST00000577686 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
SMARCD2-205ENST00000577686 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-205ENST00000577686 C10orf71Q711Q0 1435 aa19.34■□□□□ 0.69
SMARCD2-205ENST00000577686 BCS1LQ9Y276 419 aa19.34■□□□□ 0.69
SMARCD2-205ENST00000577686 HSPA6P17066 643 aa19.33■□□□□ 0.68
SMARCD2-205ENST00000577686 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.68
SMARCD2-205ENST00000577686 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
SMARCD2-205ENST00000577686 GYS1P13807 737 aa19.32■□□□□ 0.68
SMARCD2-205ENST00000577686 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
SMARCD2-205ENST00000577686 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
SMARCD2-205ENST00000577686 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
SMARCD2-205ENST00000577686 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
SMARCD2-205ENST00000577686 FCHSD2O94868 740 aa19.3■□□□□ 0.68
SMARCD2-205ENST00000577686 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
SMARCD2-205ENST00000577686 AKAP4Q5JQC9 854 aa19.3■□□□□ 0.68
SMARCD2-205ENST00000577686 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
SMARCD2-205ENST00000577686 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
SMARCD2-205ENST00000577686 A0A0G2JLW4 131 aa19.29■□□□□ 0.68
SMARCD2-205ENST00000577686 ARHGAP27Q6ZUM4 889 aa19.29■□□□□ 0.68
SMARCD2-205ENST00000577686 KIF13BQ9NQT8 1826 aa19.29■□□□□ 0.68
SMARCD2-205ENST00000577686 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
SMARCD2-205ENST00000577686 ZPR1O75312 459 aa19.27■□□□□ 0.68
SMARCD2-205ENST00000577686 DPEP1P16444 411 aa19.27■□□□□ 0.68
SMARCD2-205ENST00000577686 IL13P35225 146 aa19.27■□□□□ 0.68
SMARCD2-205ENST00000577686 PIM2Q9P1W9 311 aa19.27■□□□□ 0.68
SMARCD2-205ENST00000577686 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
SMARCD2-205ENST00000577686 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
SMARCD2-205ENST00000577686 KIF3CO14782 793 aa19.24■□□□□ 0.67
SMARCD2-205ENST00000577686 TOMM70O94826 608 aa19.24■□□□□ 0.67
SMARCD2-205ENST00000577686 DALRD3Q5D0E6 543 aaKnown RBP19.24■□□□□ 0.67
SMARCD2-205ENST00000577686 C16orf71Q8IYS4 520 aaPredicted RBP19.24■□□□□ 0.67
SMARCD2-205ENST00000577686 APLP1P51693 650 aa19.23■□□□□ 0.67
SMARCD2-205ENST00000577686 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
SMARCD2-205ENST00000577686 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
SMARCD2-205ENST00000577686 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
SMARCD2-205ENST00000577686 FKBP8Q14318 412 aa19.21■□□□□ 0.67
SMARCD2-205ENST00000577686 AMER1Q5JTC6 1135 aaPredicted RBP19.21■□□□□ 0.67
SMARCD2-205ENST00000577686 KDM2BQ8NHM5 1336 aa19.21■□□□□ 0.67
SMARCD2-205ENST00000577686 TJP1Q07157 1748 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 SCN11AQ9UI33 1791 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 RNMTO43148 476 aaKnown RBP19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 DIAPH1O60610 1272 aaKnown RBP19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 C9orf131Q5VYM1 1079 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 DNAJC10Q8IXB1 793 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 MRC1P22897 1456 aa19.2■□□□□ 0.66
SMARCD2-205ENST00000577686 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
SMARCD2-205ENST00000577686 TTC5Q8N0Z6 440 aa19.19■□□□□ 0.66
SMARCD2-205ENST00000577686 VSIG10Q8N0Z9 540 aa19.19■□□□□ 0.66
SMARCD2-205ENST00000577686 SOS1Q07889 1333 aaPredicted RBP19.19■□□□□ 0.66
SMARCD2-205ENST00000577686 HMOX1P09601 288 aa19.18■□□□□ 0.66
SMARCD2-205ENST00000577686 DDR1Q08345 913 aa19.18■□□□□ 0.66
SMARCD2-205ENST00000577686 USPL1Q5W0Q7 1092 aa19.18■□□□□ 0.66
SMARCD2-205ENST00000577686 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
SMARCD2-205ENST00000577686 COL15A1P39059 1388 aa19.18■□□□□ 0.66
SMARCD2-205ENST00000577686 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
SMARCD2-205ENST00000577686 CYP19A1P11511 503 aaPredicted RBP19.17■□□□□ 0.66
SMARCD2-205ENST00000577686 KCNA3P22001 575 aa19.17■□□□□ 0.66
SMARCD2-205ENST00000577686 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
SMARCD2-205ENST00000577686 MYH14Q7Z406 1995 aaKnown RBP19.17■□□□□ 0.66
SMARCD2-205ENST00000577686 A0A087WZG4 1122 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 STARD3NLO95772 234 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 TM4SF1P30408 202 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 RBM46Q8TBY0 533 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms