RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
RNF43-202ENST00000577625 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 MEGF6O75095 1541 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 ABCC4O15439 1325 aa17.4■□□□□ 0.38
RNF43-202ENST00000577625 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.38
RNF43-202ENST00000577625 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
RNF43-202ENST00000577625 RGS12O14924 1447 aa17.38■□□□□ 0.37
RNF43-202ENST00000577625 AHDC1Q5TGY3 1603 aaPredicted RBP17.38■□□□□ 0.37
RNF43-202ENST00000577625 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
RNF43-202ENST00000577625 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
RNF43-202ENST00000577625 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
RNF43-202ENST00000577625 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
RNF43-202ENST00000577625 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
RNF43-202ENST00000577625 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
RNF43-202ENST00000577625 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
RNF43-202ENST00000577625 API5Q9BZZ5 524 aaKnown RBP17.36■□□□□ 0.37
RNF43-202ENST00000577625 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
RNF43-202ENST00000577625 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
RNF43-202ENST00000577625 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
RNF43-202ENST00000577625 ZBTB40Q9NUA8 1239 aa17.36■□□□□ 0.37
RNF43-202ENST00000577625 PARP4Q9UKK3 1724 aaKnown RBP17.36■□□□□ 0.37
RNF43-202ENST00000577625 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
RNF43-202ENST00000577625 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
RNF43-202ENST00000577625 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
RNF43-202ENST00000577625 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
RNF43-202ENST00000577625 PTPRCP08575 1304 aa17.33■□□□□ 0.37
RNF43-202ENST00000577625 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.37
RNF43-202ENST00000577625 HSP90AA2PQ14568 343 aaPredicted RBP17.33■□□□□ 0.37
RNF43-202ENST00000577625 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.36
RNF43-202ENST00000577625 TEFQ10587 303 aa17.33■□□□□ 0.36
RNF43-202ENST00000577625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.363e-15■■■■□ 22
RNF43-202ENST00000577625 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
RNF43-202ENST00000577625 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
RNF43-202ENST00000577625 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
RNF43-202ENST00000577625 N4BP2Q86UW6 1770 aaPredicted RBP17.32■□□□□ 0.36
RNF43-202ENST00000577625 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
RNF43-202ENST00000577625 RRAGDQ9NQL2 400 aaPredicted RBP17.31■□□□□ 0.36
RNF43-202ENST00000577625 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
RNF43-202ENST00000577625 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
RNF43-202ENST00000577625 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
RNF43-202ENST00000577625 RGS3P49796 1198 aa17.3■□□□□ 0.36
RNF43-202ENST00000577625 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
RNF43-202ENST00000577625 G2E3Q7L622 706 aa17.3■□□□□ 0.36
RNF43-202ENST00000577625 KCNQ3O43525 872 aa17.29■□□□□ 0.36
RNF43-202ENST00000577625 PHKG2P15735 406 aa17.29■□□□□ 0.36
RNF43-202ENST00000577625 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
RNF43-202ENST00000577625 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
RNF43-202ENST00000577625 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
RNF43-202ENST00000577625 MRC1P22897 1456 aa17.29■□□□□ 0.36
RNF43-202ENST00000577625 PHLPP1O60346 1717 aa17.28■□□□□ 0.36
RNF43-202ENST00000577625 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
RNF43-202ENST00000577625 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
RNF43-202ENST00000577625 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
RNF43-202ENST00000577625 FRAT2O75474 233 aaPredicted RBP17.28■□□□□ 0.36
RNF43-202ENST00000577625 HOXB7P09629 217 aa17.28■□□□□ 0.36
RNF43-202ENST00000577625 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
RNF43-202ENST00000577625 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
RNF43-202ENST00000577625 CYP27B1O15528 508 aa17.26■□□□□ 0.35
RNF43-202ENST00000577625 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
RNF43-202ENST00000577625 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
RNF43-202ENST00000577625 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
RNF43-202ENST00000577625 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
RNF43-202ENST00000577625 FLIIQ13045 1269 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
RNF43-202ENST00000577625 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 C5P01031 1676 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
RNF43-202ENST00000577625 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
RNF43-202ENST00000577625 LARP1Q6PKG0 1096 aaKnown RBP17.24■□□□□ 0.35
RNF43-202ENST00000577625 F6X3S4 739 aa17.23■□□□□ 0.35
RNF43-202ENST00000577625 STRN4Q9NRL3 753 aa17.23■□□□□ 0.35
RNF43-202ENST00000577625 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
RNF43-202ENST00000577625 NAP1L5Q96NT1 182 aaPredicted RBP17.23■□□□□ 0.35
RNF43-202ENST00000577625 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
RNF43-202ENST00000577625 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
RNF43-202ENST00000577625 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
RNF43-202ENST00000577625 FKBP5Q13451 457 aaPredicted RBP17.21■□□□□ 0.35
RNF43-202ENST00000577625 PLCH1Q4KWH8 1693 aa17.21■□□□□ 0.35
RNF43-202ENST00000577625 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
RNF43-202ENST00000577625 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
RNF43-202ENST00000577625 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
RNF43-202ENST00000577625 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.34
RNF43-202ENST00000577625 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.34
RNF43-202ENST00000577625 IL2RBP14784 551 aa17.21■□□□□ 0.34
RNF43-202ENST00000577625 EVA1CP58658 441 aa17.21■□□□□ 0.34
RNF43-202ENST00000577625 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.34
RNF43-202ENST00000577625 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.34
RNF43-202ENST00000577625 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
RNF43-202ENST00000577625 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
RNF43-202ENST00000577625 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
RNF43-202ENST00000577625 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
RNF43-202ENST00000577625 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
RNF43-202ENST00000577625 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
RNF43-202ENST00000577625 CLCN1P35523 988 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms