RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 DHX9Q08211 1270 aaKnown RBP12.81□□□□□ -0.36
CALCOCO2-226ENST00000575461 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
CALCOCO2-226ENST00000575461 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
CALCOCO2-226ENST00000575461 INHAP05111 366 aa12.8□□□□□ -0.36
CALCOCO2-226ENST00000575461 ALKBH2Q6NS38 261 aa12.8□□□□□ -0.36
CALCOCO2-226ENST00000575461 TMC7Q7Z402 723 aa12.8□□□□□ -0.36
CALCOCO2-226ENST00000575461 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
CALCOCO2-226ENST00000575461 MPSTP25325 297 aa12.79□□□□□ -0.36
CALCOCO2-226ENST00000575461 EPHA4P54764 986 aa12.79□□□□□ -0.36
CALCOCO2-226ENST00000575461 TRIM32Q13049 653 aa12.79□□□□□ -0.36
CALCOCO2-226ENST00000575461 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
CALCOCO2-226ENST00000575461 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
CALCOCO2-226ENST00000575461 ITGAEP38570 1179 aa12.78□□□□□ -0.36
CALCOCO2-226ENST00000575461 PTPN5P54829 565 aa12.78□□□□□ -0.36
CALCOCO2-226ENST00000575461 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
CALCOCO2-226ENST00000575461 TSPAN10Q9H1Z9 355 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO2-226ENST00000575461 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
CALCOCO2-226ENST00000575461 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.37
CALCOCO2-226ENST00000575461 POTEMA6NI47 508 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 TREHO43280 583 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 DRC1Q96MC2 740 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 CDK15Q96Q40 435 aa12.76□□□□□ -0.37
CALCOCO2-226ENST00000575461 GNRH1P01148 92 aa12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 DMRTB1Q96MA1 342 aa12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 ETNK1Q9HBU6 452 aa12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 CYLDQ9NQC7 956 aa12.75□□□□□ -0.37
CALCOCO2-226ENST00000575461 SKOR1P84550 965 aa12.74□□□□□ -0.37
CALCOCO2-226ENST00000575461 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
CALCOCO2-226ENST00000575461 LCE2DQ5TA82 110 aaPredicted RBP12.74□□□□□ -0.37
CALCOCO2-226ENST00000575461 TMC1Q8TDI8 760 aa12.74□□□□□ -0.37
CALCOCO2-226ENST00000575461 STIM2Q9P246 746 aa12.74□□□□□ -0.37
CALCOCO2-226ENST00000575461 FOXK2Q01167 660 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 MPNDQ8N594 471 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 SCHIP1Q9P0W5 487 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO2-226ENST00000575461 A0A1W2PRU2 124 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 MYT1Q01538 1121 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 AAMPQ13685 434 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 PRKD2Q9BZL6 878 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 TMPRSS4Q9NRS4 437 aa12.72□□□□□ -0.37
CALCOCO2-226ENST00000575461 A6NJY4 79 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 SCAMP3O14828 347 aaKnown RBP12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 FSHRP23945 695 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 RPIAP49247 311 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 SLC9A9Q8IVB4 645 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 BACH2Q9BYV9 841 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
CALCOCO2-226ENST00000575461 GGCXP38435 758 aa12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 PSMA6P60900 246 aaKnown RBP12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 DSC3Q14574 896 aa12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 MTFR1Q15390 333 aa12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 KRTAP3-3Q9BYR6 98 aa12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 KRTAP3-2Q9BYR7 98 aa12.7□□□□□ -0.38
CALCOCO2-226ENST00000575461 FZD6O60353 706 aa12.69□□□□□ -0.38
CALCOCO2-226ENST00000575461 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-226ENST00000575461 GRM5P41594 1212 aa12.69□□□□□ -0.38
CALCOCO2-226ENST00000575461 SMTNP53814 917 aa12.69□□□□□ -0.38
CALCOCO2-226ENST00000575461 COX20Q5RI15 118 aa12.69□□□□□ -0.38
CALCOCO2-226ENST00000575461 RNF223E7ERA6 249 aa12.68□□□□□ -0.38
CALCOCO2-226ENST00000575461 TNFRSF10BO14763 440 aa12.68□□□□□ -0.38
CALCOCO2-226ENST00000575461 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
CALCOCO2-226ENST00000575461 CCDC116Q8IYX3 515 aa12.68□□□□□ -0.38
CALCOCO2-226ENST00000575461 MYO19Q96H55 970 aa12.68□□□□□ -0.38
CALCOCO2-226ENST00000575461 LILRA1O75019 489 aa12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 ERCC5P28715 1186 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 EHHADHQ08426 723 aa12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 SF3A1Q15459 793 aaKnown RBP12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 FAM129BQ96TA1 746 aa12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
CALCOCO2-226ENST00000575461 NR5A1Q13285 461 aa12.66□□□□□ -0.38
CALCOCO2-226ENST00000575461 NAALADL2Q58DX5 795 aa12.66□□□□□ -0.38
CALCOCO2-226ENST00000575461 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
CALCOCO2-226ENST00000575461 ALKBH8Q96BT7 664 aaKnown RBP12.66□□□□□ -0.38
CALCOCO2-226ENST00000575461 CDK2AP1O14519 115 aa12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 MAPK8P45983 427 aa12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
CALCOCO2-226ENST00000575461 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms