RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 FIGNL2A6NMB9 653 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 MAN1A2O60476 641 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 CDK11BP21127 795 aaKnown RBP7.74□□□□□ -1.17
TSR1-203ENST00000575049 RFX1P22670 979 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 GPC1P35052 558 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 RNF144AP50876 292 aaPredicted RBP7.74□□□□□ -1.17
TSR1-203ENST00000575049 GDF10P55107 478 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 KANK4Q5T7N3 995 aaPredicted RBP7.74□□□□□ -1.17
TSR1-203ENST00000575049 OGFOD1Q8N543 542 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 XAGE2Q96GT9 111 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 DNAAF2Q9NVR5 837 aaKnown RBP7.74□□□□□ -1.17
TSR1-203ENST00000575049 KIAA1024Q9UPX6 916 aa7.74□□□□□ -1.17
TSR1-203ENST00000575049 CDK11AQ9UQ88 783 aaPredicted RBP7.74□□□□□ -1.17
TSR1-203ENST00000575049 TMEM229AB2RXF0 380 aa7.73□□□□□ -1.17
TSR1-203ENST00000575049 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
TSR1-203ENST00000575049 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
TSR1-203ENST00000575049 INHAP05111 366 aa7.73□□□□□ -1.17
TSR1-203ENST00000575049 VRTNQ9H8Y1 702 aa7.73□□□□□ -1.17
TSR1-203ENST00000575049 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
TSR1-203ENST00000575049 RASA1P20936 1047 aa7.72□□□□□ -1.17
TSR1-203ENST00000575049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.72□□□□□ -1.173e-7■□□□□ 9.2
TSR1-203ENST00000575049 LARGE2Q8N3Y3 721 aa7.72□□□□□ -1.17
TSR1-203ENST00000575049 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
TSR1-203ENST00000575049 ZNF594Q96JF6 807 aaPredicted RBP7.72□□□□□ -1.17
TSR1-203ENST00000575049 PPP1R15AO75807 674 aaPredicted RBP7.71□□□□□ -1.18
TSR1-203ENST00000575049 CENPCQ03188 943 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
TSR1-203ENST00000575049 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 CCDC102BQ68D86 513 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 LARP1Q6PKG0 1096 aaKnown RBP7.71□□□□□ -1.18
TSR1-203ENST00000575049 SIX5Q8N196 739 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
TSR1-203ENST00000575049 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
TSR1-203ENST00000575049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.7□□□□□ -1.18
TSR1-203ENST00000575049 FAM196BA6NMK8 535 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L21D6R901 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 EIF5BO60841 1220 aaKnown RBP7.7□□□□□ -1.18
TSR1-203ENST00000575049 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 TLR1Q15399 786 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
TSR1-203ENST00000575049 SERTAD1Q9UHV2 236 aa7.7□□□□□ -1.18
TSR1-203ENST00000575049 PATL2C9JE40 543 aaKnown RBP7.69□□□□□ -1.18
TSR1-203ENST00000575049 DKK1O94907 266 aa7.69□□□□□ -1.18
TSR1-203ENST00000575049 SRPK2P78362 688 aaKnown RBP7.69□□□□□ -1.18
TSR1-203ENST00000575049 PTK7Q13308 1070 aa7.69□□□□□ -1.18
TSR1-203ENST00000575049 PRICKLE2Q7Z3G6 844 aa7.69□□□□□ -1.18
TSR1-203ENST00000575049 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
TSR1-203ENST00000575049 BACH1O14867 736 aa7.68□□□□□ -1.18
TSR1-203ENST00000575049 SMTNP53814 917 aa7.68□□□□□ -1.18
TSR1-203ENST00000575049 PDE4CQ08493 712 aa7.68□□□□□ -1.18
TSR1-203ENST00000575049 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
TSR1-203ENST00000575049 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
TSR1-203ENST00000575049 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
TSR1-203ENST00000575049 SFI1A8K8P3 1242 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 SPATA31C2B4DYI2 1134 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 RHOQP17081 205 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 PBXIP1Q96AQ6 731 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
TSR1-203ENST00000575049 A6NJY4 79 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
TSR1-203ENST00000575049 PTSQ03393 145 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 KCNA1Q09470 495 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 POU4F2Q12837 409 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 DPYDQ12882 1025 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 MTFR1Q15390 333 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
TSR1-203ENST00000575049 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
TSR1-203ENST00000575049 USP35Q9P2H5 1018 aa7.66□□□□□ -1.18
TSR1-203ENST00000575049 M0R2N6 131 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 EPHA4P54764 986 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 SEC13P55735 322 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
TSR1-203ENST00000575049 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 TNS4Q8IZW8 715 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
TSR1-203ENST00000575049 NISCHQ9Y2I1 1504 aa7.64□□□□□ -1.19
TSR1-203ENST00000575049 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
TSR1-203ENST00000575049 ATG7O95352 703 aa7.64□□□□□ -1.19
TSR1-203ENST00000575049 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
TSR1-203ENST00000575049 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
TSR1-203ENST00000575049 SCHIP1Q9P0W5 487 aaPredicted RBP7.64□□□□□ -1.19
TSR1-203ENST00000575049 NXF1Q9UBU9 619 aaKnown RBP7.64□□□□□ -1.19
TSR1-203ENST00000575049 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
TSR1-203ENST00000575049 IQSEC3Q9UPP2 1182 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms