RNA–Protein interactions for RNA: ENST00000575022.1

FBXO39-203, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 1,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-203ENST00000575022 LTV1Q96GA3 475 aaPredicted RBP14.07□□□□□ -0.16
FBXO39-203ENST00000575022 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
FBXO39-203ENST00000575022 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
FBXO39-203ENST00000575022 HOXC9P31274 260 aa14.06□□□□□ -0.16
FBXO39-203ENST00000575022 NFAT5O94916 1531 aa14.05□□□□□ -0.16
FBXO39-203ENST00000575022 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
FBXO39-203ENST00000575022 IP6K1Q92551 441 aa14.05□□□□□ -0.16
FBXO39-203ENST00000575022 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
FBXO39-203ENST00000575022 NUDCQ9Y266 331 aa14.05□□□□□ -0.16
FBXO39-203ENST00000575022 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
FBXO39-203ENST00000575022 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
FBXO39-203ENST00000575022 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
FBXO39-203ENST00000575022 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
FBXO39-203ENST00000575022 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
FBXO39-203ENST00000575022 EIF4A2Q14240 407 aaKnown RBP14.04□□□□□ -0.16
FBXO39-203ENST00000575022 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
FBXO39-203ENST00000575022 FLT4P35916 1363 aa14.04□□□□□ -0.16
FBXO39-203ENST00000575022 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
FBXO39-203ENST00000575022 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
FBXO39-203ENST00000575022 IL13P35225 146 aa14.03□□□□□ -0.16
FBXO39-203ENST00000575022 INSRP06213 1382 aa14.03□□□□□ -0.16
FBXO39-203ENST00000575022 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
FBXO39-203ENST00000575022 PEAK1Q9H792 1746 aa14.02□□□□□ -0.16
FBXO39-203ENST00000575022 FAM83GA6ND36 823 aa14.02□□□□□ -0.17
FBXO39-203ENST00000575022 MAP2P11137 1827 aaKnown RBP14.01□□□□□ -0.17
FBXO39-203ENST00000575022 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
FBXO39-203ENST00000575022 JCADQ9P266 1359 aa14.01□□□□□ -0.17
FBXO39-203ENST00000575022 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
FBXO39-203ENST00000575022 PHRF1Q9P1Y6 1649 aaKnown RBP14.01□□□□□ -0.17
FBXO39-203ENST00000575022 RTL1A6NKG5 1358 aa14□□□□□ -0.17
FBXO39-203ENST00000575022 CPDO75976 1380 aa14□□□□□ -0.17
FBXO39-203ENST00000575022 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
FBXO39-203ENST00000575022 HMOX1P09601 288 aa14□□□□□ -0.17
FBXO39-203ENST00000575022 ANKRD24Q8TF21 1146 aa14□□□□□ -0.17
FBXO39-203ENST00000575022 CSB-PGBD3P0DP91 1061 aa13.99□□□□□ -0.17
FBXO39-203ENST00000575022 PDE4AP27815 886 aa13.99□□□□□ -0.17
FBXO39-203ENST00000575022 KCNK17Q96T54 332 aa13.99□□□□□ -0.17
FBXO39-203ENST00000575022 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
FBXO39-203ENST00000575022 EYA1Q99502 592 aa13.98□□□□□ -0.17
FBXO39-203ENST00000575022 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
FBXO39-203ENST00000575022 CRYBG1Q9Y4K1 1723 aa13.98□□□□□ -0.17
FBXO39-203ENST00000575022 FOSBP53539 338 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 EVA1CP58658 441 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 MFSD10Q14728 455 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
FBXO39-203ENST00000575022 COL22A1Q8NFW1 1626 aaPredicted RBP13.97□□□□□ -0.17
FBXO39-203ENST00000575022 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
FBXO39-203ENST00000575022 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 ZNF454Q8N9F8 522 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 NLRP2Q9NX02 1062 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
FBXO39-203ENST00000575022 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
FBXO39-203ENST00000575022 BLMP54132 1417 aaPredicted RBP13.96□□□□□ -0.18
FBXO39-203ENST00000575022 LTN1O94822 1766 aa13.96□□□□□ -0.18
FBXO39-203ENST00000575022 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
FBXO39-203ENST00000575022 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
FBXO39-203ENST00000575022 HCSTQ9UBK5 93 aa13.95□□□□□ -0.18
FBXO39-203ENST00000575022 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
FBXO39-203ENST00000575022 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
FBXO39-203ENST00000575022 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 FCHSD2O94868 740 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
FBXO39-203ENST00000575022 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 VPS9D1Q9Y2B5 631 aa13.94□□□□□ -0.18
FBXO39-203ENST00000575022 APAF1O14727 1248 aa13.93□□□□□ -0.18
FBXO39-203ENST00000575022 NGLY1Q96IV0 654 aa13.93□□□□□ -0.18
FBXO39-203ENST00000575022 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
FBXO39-203ENST00000575022 IGSF1Q8N6C5 1336 aa13.92□□□□□ -0.18
FBXO39-203ENST00000575022 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
FBXO39-203ENST00000575022 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
FBXO39-203ENST00000575022 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
FBXO39-203ENST00000575022 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
FBXO39-203ENST00000575022 PLEKHF1Q96S99 279 aa13.92□□□□□ -0.18
FBXO39-203ENST00000575022 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
FBXO39-203ENST00000575022 RRP7AQ9Y3A4 280 aaKnown RBP13.92□□□□□ -0.18
FBXO39-203ENST00000575022 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 NEFMP07197 916 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
FBXO39-203ENST00000575022 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 COL18A1P39060 1754 aa13.91□□□□□ -0.18
FBXO39-203ENST00000575022 LRP6O75581 1613 aa13.9□□□□□ -0.18
FBXO39-203ENST00000575022 EVI5O60447 810 aa13.9□□□□□ -0.18
FBXO39-203ENST00000575022 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
FBXO39-203ENST00000575022 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.19
FBXO39-203ENST00000575022 COL5A2P05997 1499 aaPredicted RBP13.89□□□□□ -0.19
FBXO39-203ENST00000575022 SLC4A5Q9BY07 1137 aa13.89□□□□□ -0.19
FBXO39-203ENST00000575022 ABCC6O95255 1503 aa13.89□□□□□ -0.19
FBXO39-203ENST00000575022 PLA2G2EQ9NZK7 142 aa13.88□□□□□ -0.19
FBXO39-203ENST00000575022 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
FBXO39-203ENST00000575022 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
FBXO39-203ENST00000575022 COL14A1Q05707 1796 aaKnown RBP13.87□□□□□ -0.19
FBXO39-203ENST00000575022 RGPD5Q99666 1765 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms