RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SYT17Q9BSW7 474 aa26.58■■□□□ 1.85
SCARF1-208ENST00000574545 FHDC1Q9C0D6 1143 aaPredicted RBP26.58■■□□□ 1.85
SCARF1-208ENST00000574545 ATP6V1AP38606 617 aa26.56■■□□□ 1.84
SCARF1-208ENST00000574545 MTHFSDQ2M296 383 aaKnown RBP26.56■■□□□ 1.84
SCARF1-208ENST00000574545 FLAD1Q8NFF5 587 aa26.56■■□□□ 1.84
SCARF1-208ENST00000574545 PPP2R1AP30153 589 aa26.55■■□□□ 1.84
SCARF1-208ENST00000574545 NFATC2IPQ8NCF5 419 aa26.55■■□□□ 1.84
SCARF1-208ENST00000574545 AK7Q96M32 723 aa26.54■■□□□ 1.84
SCARF1-208ENST00000574545 LGR6Q9HBX8 967 aa26.54■■□□□ 1.84
SCARF1-208ENST00000574545 UTRNP46939 3433 aa26.54■■□□□ 1.84
SCARF1-208ENST00000574545 MAP3K5Q99683 1374 aa26.54■■□□□ 1.84
SCARF1-208ENST00000574545 SCN11AQ9UI33 1791 aa26.53■■□□□ 1.84
SCARF1-208ENST00000574545 UBR3Q6ZT12 1888 aa26.53■■□□□ 1.84
SCARF1-208ENST00000574545 ZNF831Q5JPB2 1677 aa26.52■■□□□ 1.84
SCARF1-208ENST00000574545 SMIM5Q71RC9 77 aa26.52■■□□□ 1.84
SCARF1-208ENST00000574545 U2SURPO15042 1029 aaKnown RBP26.51■■□□□ 1.83
SCARF1-208ENST00000574545 POLD1P28340 1107 aa26.51■■□□□ 1.83
SCARF1-208ENST00000574545 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
SCARF1-208ENST00000574545 MSH5O43196 834 aa26.5■■□□□ 1.83
SCARF1-208ENST00000574545 SSFA2P28290 1259 aa26.5■■□□□ 1.83
SCARF1-208ENST00000574545 RBM42Q9BTD8 480 aaKnown RBP26.5■■□□□ 1.83
SCARF1-208ENST00000574545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.49■■□□□ 1.83
SCARF1-208ENST00000574545 SLC52A2Q9HAB3 445 aa26.49■■□□□ 1.83
SCARF1-208ENST00000574545 ADAMTS7Q9UKP4 1686 aa26.49■■□□□ 1.83
SCARF1-208ENST00000574545 CFAP53Q96M91 514 aa26.48■■□□□ 1.83
SCARF1-208ENST00000574545 MRC1P22897 1456 aa26.47■■□□□ 1.83
SCARF1-208ENST00000574545 RC3H1Q5TC82 1133 aaKnown RBP26.46■■□□□ 1.83
SCARF1-208ENST00000574545 GNPATO15228 680 aa26.45■■□□□ 1.82
SCARF1-208ENST00000574545 PHF14O94880 888 aa26.45■■□□□ 1.82
SCARF1-208ENST00000574545 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
SCARF1-208ENST00000574545 RSPH6AQ9H0K4 717 aa26.45■■□□□ 1.82
SCARF1-208ENST00000574545 PTCD1O75127 700 aaKnown RBP26.44■■□□□ 1.82
SCARF1-208ENST00000574545 CNTNAP4Q9C0A0 1308 aa26.43■■□□□ 1.82
SCARF1-208ENST00000574545 COL5A3P25940 1745 aaPredicted RBP26.43■■□□□ 1.82
SCARF1-208ENST00000574545 PHACTR3Q96KR7 559 aa26.43■■□□□ 1.82
SCARF1-208ENST00000574545 GAS2L2Q8NHY3 880 aa26.42■■□□□ 1.82
SCARF1-208ENST00000574545 NUDCQ9Y266 331 aa26.42■■□□□ 1.82
SCARF1-208ENST00000574545 VIRMAQ69YN4 1812 aaKnown RBP26.42■■□□□ 1.82
SCARF1-208ENST00000574545 MYH14Q7Z406 1995 aaKnown RBP26.41■■□□□ 1.82
SCARF1-208ENST00000574545 DCAF8L1A6NGE4 600 aa26.41■■□□□ 1.82
SCARF1-208ENST00000574545 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
SCARF1-208ENST00000574545 PRKAR2BP31323 418 aa26.4■■□□□ 1.82
SCARF1-208ENST00000574545 CICQ96RK0 1608 aaPredicted RBP26.39■■□□□ 1.82
SCARF1-208ENST00000574545 RPS6KA4O75676 772 aa26.39■■□□□ 1.82
SCARF1-208ENST00000574545 SLC39A6Q13433 755 aa26.39■■□□□ 1.82
SCARF1-208ENST00000574545 RTCBQ9Y3I0 505 aaKnown RBP26.39■■□□□ 1.82
SCARF1-208ENST00000574545 GNAT3A8MTJ3 354 aa26.38■■□□□ 1.81
SCARF1-208ENST00000574545 FCHSD2O94868 740 aa26.37■■□□□ 1.81
SCARF1-208ENST00000574545 U2AF1L5P0DN76 240 aaPredicted RBP26.37■■□□□ 1.81
SCARF1-208ENST00000574545 U2AF1Q01081 240 aaKnown RBP eCLIP26.37■■□□□ 1.81
SCARF1-208ENST00000574545 TRAPPC3LQ5T215 181 aa26.37■■□□□ 1.81
SCARF1-208ENST00000574545 NLGN2Q8NFZ4 835 aa26.37■■□□□ 1.81
SCARF1-208ENST00000574545 TJP1Q07157 1748 aa26.36■■□□□ 1.81
SCARF1-208ENST00000574545 GOLGB1Q14789 3259 aaKnown RBP26.36■■□□□ 1.81
SCARF1-208ENST00000574545 ADRA2BP18089 450 aa26.36■■□□□ 1.81
SCARF1-208ENST00000574545 ARHGEF1Q92888 912 aaKnown RBP26.36■■□□□ 1.81
SCARF1-208ENST00000574545 KCPQ6ZWJ8 1503 aa26.35■■□□□ 1.81
SCARF1-208ENST00000574545 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
SCARF1-208ENST00000574545 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
SCARF1-208ENST00000574545 CEMIPQ8WUJ3 1361 aa26.34■■□□□ 1.81
SCARF1-208ENST00000574545 INTS5Q6P9B9 1019 aaKnown RBP26.34■■□□□ 1.81
SCARF1-208ENST00000574545 DNAJC10Q8IXB1 793 aa26.34■■□□□ 1.81
SCARF1-208ENST00000574545 DDX10Q13206 875 aaKnown RBP26.33■■□□□ 1.81
SCARF1-208ENST00000574545 CD2APQ9Y5K6 639 aa26.33■■□□□ 1.81
SCARF1-208ENST00000574545 VSIG10Q8N0Z9 540 aa26.31■■□□□ 1.8
SCARF1-208ENST00000574545 CYP19A1P11511 503 aaPredicted RBP26.3■■□□□ 1.8
SCARF1-208ENST00000574545 SIPA1L3O60292 1781 aaPredicted RBP26.29■■□□□ 1.8
SCARF1-208ENST00000574545 UBR2Q8IWV8 1755 aa26.29■■□□□ 1.8
SCARF1-208ENST00000574545 GYS1P13807 737 aa26.29■■□□□ 1.8
SCARF1-208ENST00000574545 YY1P25490 414 aa26.29■■□□□ 1.8
SCARF1-208ENST00000574545 TEFQ10587 303 aa26.29■■□□□ 1.8
SCARF1-208ENST00000574545 RALBP1Q15311 655 aa26.29■■□□□ 1.8
SCARF1-208ENST00000574545 NLGN1Q8N2Q7 840 aa26.28■■□□□ 1.8
SCARF1-208ENST00000574545 RFC4P35249 363 aa26.27■■□□□ 1.8
SCARF1-208ENST00000574545 ZNF790Q6PG37 636 aa26.27■■□□□ 1.8
SCARF1-208ENST00000574545 CCDC87Q9NVE4 849 aa26.27■■□□□ 1.8
SCARF1-208ENST00000574545 MMP10P09238 476 aa26.26■■□□□ 1.79
SCARF1-208ENST00000574545 C4AP0C0L4 1744 aa26.25■■□□□ 1.79
SCARF1-208ENST00000574545 GPR162Q16538 588 aa26.25■■□□□ 1.79
SCARF1-208ENST00000574545 ZNF496Q96IT1 587 aaPredicted RBP26.25■■□□□ 1.79
SCARF1-208ENST00000574545 PLEKHF1Q96S99 279 aa26.25■■□□□ 1.79
SCARF1-208ENST00000574545 SOS1Q07889 1333 aaPredicted RBP26.24■■□□□ 1.79
SCARF1-208ENST00000574545 HTATSF1O43719 755 aaKnown RBP26.24■■□□□ 1.79
SCARF1-208ENST00000574545 TTC5Q8N0Z6 440 aa26.24■■□□□ 1.79
SCARF1-208ENST00000574545 USP42Q9H9J4 1324 aaKnown RBP26.23■■□□□ 1.79
SCARF1-208ENST00000574545 SRP68Q9UHB9 627 aaKnown RBP26.23■■□□□ 1.79
SCARF1-208ENST00000574545 HEG1Q9ULI3 1381 aa26.22■■□□□ 1.79
SCARF1-208ENST00000574545 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.79
SCARF1-208ENST00000574545 ZBTB1Q9Y2K1 713 aa26.22■■□□□ 1.79
SCARF1-208ENST00000574545 KCNQ3O43525 872 aa26.21■■□□□ 1.79
SCARF1-208ENST00000574545 MCM10Q7L590 875 aa26.21■■□□□ 1.79
SCARF1-208ENST00000574545 BTBD11A6QL63 1104 aa26.2■■□□□ 1.78
SCARF1-208ENST00000574545 DCTN1Q14203 1278 aa26.2■■□□□ 1.78
SCARF1-208ENST00000574545 RTF1Q92541 710 aaKnown RBP26.2■■□□□ 1.78
SCARF1-208ENST00000574545 FKBP8Q14318 412 aa26.19■■□□□ 1.78
SCARF1-208ENST00000574545 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
SCARF1-208ENST00000574545 FMNL2Q96PY5 1086 aa26.18■■□□□ 1.78
SCARF1-208ENST00000574545 CHD4Q14839 1912 aa26.18■■□□□ 1.78
SCARF1-208ENST00000574545 STARD3NLO95772 234 aa26.17■■□□□ 1.78
SCARF1-208ENST00000574545 TEX13AQ9BXU3 409 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms