RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 AKAP4Q5JQC9 854 aa22.22■■□□□ 1.15
TVP23B-207ENST00000574294 CFAP53Q96M91 514 aa22.22■■□□□ 1.15
TVP23B-207ENST00000574294 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
TVP23B-207ENST00000574294 COL23A1Q86Y22 540 aaPredicted RBP22.21■■□□□ 1.15
TVP23B-207ENST00000574294 FHDC1Q9C0D6 1143 aaPredicted RBP22.21■■□□□ 1.15
TVP23B-207ENST00000574294 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
TVP23B-207ENST00000574294 SYT17Q9BSW7 474 aa22.2■■□□□ 1.14
TVP23B-207ENST00000574294 SCN11AQ9UI33 1791 aa22.2■■□□□ 1.14
TVP23B-207ENST00000574294 HMOX1P09601 288 aa22.19■■□□□ 1.14
TVP23B-207ENST00000574294 SSFA2P28290 1259 aa22.19■■□□□ 1.14
TVP23B-207ENST00000574294 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
TVP23B-207ENST00000574294 UBR3Q6ZT12 1888 aa22.18■■□□□ 1.14
TVP23B-207ENST00000574294 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
TVP23B-207ENST00000574294 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
TVP23B-207ENST00000574294 NUDCQ9Y266 331 aa22.16■■□□□ 1.14
TVP23B-207ENST00000574294 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
TVP23B-207ENST00000574294 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
TVP23B-207ENST00000574294 RBM42Q9BTD8 480 aaKnown RBP22.15■■□□□ 1.14
TVP23B-207ENST00000574294 ITPK1Q13572 414 aa22.14■■□□□ 1.13
TVP23B-207ENST00000574294 RC3H1Q5TC82 1133 aaKnown RBP22.14■■□□□ 1.13
TVP23B-207ENST00000574294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
TVP23B-207ENST00000574294 SLC52A2Q9HAB3 445 aa22.13■■□□□ 1.13
TVP23B-207ENST00000574294 GNPATO15228 680 aa22.12■■□□□ 1.13
TVP23B-207ENST00000574294 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
TVP23B-207ENST00000574294 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
TVP23B-207ENST00000574294 GAS2L2Q8NHY3 880 aa22.12■■□□□ 1.13
TVP23B-207ENST00000574294 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
TVP23B-207ENST00000574294 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
TVP23B-207ENST00000574294 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
TVP23B-207ENST00000574294 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
TVP23B-207ENST00000574294 MRC1P22897 1456 aa22.1■■□□□ 1.13
TVP23B-207ENST00000574294 COL5A3P25940 1745 aaPredicted RBP22.1■■□□□ 1.13
TVP23B-207ENST00000574294 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
TVP23B-207ENST00000574294 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
TVP23B-207ENST00000574294 PHF14O94880 888 aa22.09■■□□□ 1.13
TVP23B-207ENST00000574294 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
TVP23B-207ENST00000574294 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
TVP23B-207ENST00000574294 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
TVP23B-207ENST00000574294 LGR6Q9HBX8 967 aa22.08■■□□□ 1.13
TVP23B-207ENST00000574294 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
TVP23B-207ENST00000574294 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
TVP23B-207ENST00000574294 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
TVP23B-207ENST00000574294 RPS6KA4O75676 772 aa22.06■■□□□ 1.12
TVP23B-207ENST00000574294 FCHSD2O94868 740 aa22.06■■□□□ 1.12
TVP23B-207ENST00000574294 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
TVP23B-207ENST00000574294 AMIGO3Q86WK7 504 aa22.05■■□□□ 1.12
TVP23B-207ENST00000574294 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
TVP23B-207ENST00000574294 YY1P25490 414 aa22.04■■□□□ 1.12
TVP23B-207ENST00000574294 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
TVP23B-207ENST00000574294 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
TVP23B-207ENST00000574294 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
TVP23B-207ENST00000574294 TEFQ10587 303 aa22.03■■□□□ 1.12
TVP23B-207ENST00000574294 VSIG10Q8N0Z9 540 aa22.03■■□□□ 1.12
TVP23B-207ENST00000574294 NLGN1Q8N2Q7 840 aa22.03■■□□□ 1.12
TVP23B-207ENST00000574294 MYH14Q7Z406 1995 aaKnown RBP22.02■■□□□ 1.12
TVP23B-207ENST00000574294 RFC4P35249 363 aa22.01■■□□□ 1.11
TVP23B-207ENST00000574294 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
TVP23B-207ENST00000574294 GPR162Q16538 588 aa22.01■■□□□ 1.11
TVP23B-207ENST00000574294 CHD4Q14839 1912 aa22.01■■□□□ 1.11
TVP23B-207ENST00000574294 TJP1Q07157 1748 aa22■■□□□ 1.11
TVP23B-207ENST00000574294 TTC5Q8N0Z6 440 aa22■■□□□ 1.11
TVP23B-207ENST00000574294 ARHGEF1Q92888 912 aaKnown RBP22■■□□□ 1.11
TVP23B-207ENST00000574294 NEFMP07197 916 aa21.99■■□□□ 1.11
TVP23B-207ENST00000574294 RALBP1Q15311 655 aa21.99■■□□□ 1.11
TVP23B-207ENST00000574294 SMIM5Q71RC9 77 aa21.98■■□□□ 1.11
TVP23B-207ENST00000574294 IL17REQ8NFR9 667 aa21.98■■□□□ 1.11
TVP23B-207ENST00000574294 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
TVP23B-207ENST00000574294 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
TVP23B-207ENST00000574294 UBR2Q8IWV8 1755 aa21.97■■□□□ 1.11
TVP23B-207ENST00000574294 GRIN3BO60391 1043 aa21.97■■□□□ 1.11
TVP23B-207ENST00000574294 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
TVP23B-207ENST00000574294 NLGN2Q8NFZ4 835 aa21.97■■□□□ 1.11
TVP23B-207ENST00000574294 RTF1Q92541 710 aaKnown RBP21.97■■□□□ 1.11
TVP23B-207ENST00000574294 TEX13AQ9BXU3 409 aaPredicted RBP21.97■■□□□ 1.11
TVP23B-207ENST00000574294 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
TVP23B-207ENST00000574294 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
TVP23B-207ENST00000574294 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
TVP23B-207ENST00000574294 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
TVP23B-207ENST00000574294 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
TVP23B-207ENST00000574294 SIPA1L3O60292 1781 aaPredicted RBP21.96■■□□□ 1.11
TVP23B-207ENST00000574294 STARD3NLO95772 234 aa21.95■■□□□ 1.1
TVP23B-207ENST00000574294 MMP10P09238 476 aa21.95■■□□□ 1.1
TVP23B-207ENST00000574294 ZNF790Q6PG37 636 aa21.95■■□□□ 1.1
TVP23B-207ENST00000574294 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
TVP23B-207ENST00000574294 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
TVP23B-207ENST00000574294 GYS1P13807 737 aa21.94■■□□□ 1.1
TVP23B-207ENST00000574294 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
TVP23B-207ENST00000574294 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
TVP23B-207ENST00000574294 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
TVP23B-207ENST00000574294 ZPR1O75312 459 aa21.91■■□□□ 1.1
TVP23B-207ENST00000574294 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
TVP23B-207ENST00000574294 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
TVP23B-207ENST00000574294 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
TVP23B-207ENST00000574294 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
TVP23B-207ENST00000574294 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
TVP23B-207ENST00000574294 SOS1Q07889 1333 aaPredicted RBP21.9■■□□□ 1.1
TVP23B-207ENST00000574294 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
TVP23B-207ENST00000574294 KIF13BQ9NQT8 1826 aa21.9■■□□□ 1.1
TVP23B-207ENST00000574294 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
TVP23B-207ENST00000574294 TGFB2P61812 414 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms