RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, human

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD3-217	ENST00000574022	EHHADH	Q08426	723 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	PSMD2	Q13200	908 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	GNL2	Q13823	731 aa	Known RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	DSC3	Q14574	896 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	TMC4	Q7Z404	712 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	NOP9	Q86U38	636 aa	Known RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	METTL16	Q86W50	562 aa	Known RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	TNS4	Q8IZW8	715 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	SLC43A3	Q8NBI5	491 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	CHMP7	Q8WUX9	453 aa	Predicted RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	FOXJ1	Q92949	421 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	DMRTB1	Q96MA1	342 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	PRKD2	Q9BZL6	878 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	TGIF2	Q9GZN2	237 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	CCSER2	Q9H7U1	834 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	CAPN10	Q9HC96	672 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	METTL5	Q9NRN9	209 aa	Known RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	CCDC87	Q9NVE4	849 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	PCDH10	Q9P2E7	1040 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	VTI1B	Q9UEU0	232 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	PRKAG2	Q9UGJ0	569 aa		3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	CDV3	Q9UKY7	258 aa	Known RBP	3.1	□□□□□ -1.91
CHD3-217	ENST00000574022	GTF2F1	P35269	517 aa	Known RBP eCLIP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	ZNF76	P36508	570 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	EIF1AX	P47813	144 aa	Known RBP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	BCAM	P50895	628 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	FANCC	Q00597	558 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	PDE3B	Q13370	1112 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	LINC01559	Q495D7	138 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	C4orf48	Q5BLP8	95 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	C16orf46	Q6P387	395 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	ANKRD13A	Q8IZ07	590 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	ZNF687	Q8N1G0	1237 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	ZNF511	Q8NB15	262 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	SP7	Q8TDD2	431 aa	Predicted RBP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	DHX38	Q92620	1227 aa	Known RBP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	DNAJC2	Q99543	621 aa	Known RBP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	SAP130	Q9H0E3	1048 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	RNF19A	Q9NV58	838 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	CUEDC1	Q9NWM3	386 aa	Predicted RBP	3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	NLRP2	Q9NX02	1062 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	STIM2	Q9P246	746 aa		3.09	□□□□□ -1.91
CHD3-217	ENST00000574022	TMEM229A	B2RXF0	380 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	PPP1R12B	O60237	982 aa	Predicted RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	FZD6	O60353	706 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	ADH1B	P00325	375 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	SCTR	P47872	440 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	ALG1L	Q6GMV1	187 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	ADGRD1	Q6QNK2	874 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	TRMT44	Q8IYL2	757 aa	Known RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	WNT2B	Q93097	391 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	TRIM52	Q96A61	297 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	KCTD15	Q96SI1	283 aa	Predicted RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	TINF2	Q9BSI4	451 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	HIRIP3	Q9BW71	556 aa	Predicted RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	C1QTNF2	Q9BXJ5	285 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	LNPK	Q9C0E8	428 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	NIF3L1	Q9GZT8	377 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	ACBD3	Q9H3P7	528 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	SERTAD1	Q9UHV2	236 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	WWC3	Q9ULE0	1092 aa		3.08	□□□□□ -1.92
CHD3-217	ENST00000574022	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	3.08	□□□□□ -1.92
CHD3-217	ENST00000574022		A0A1W2PRU2	124 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	TLDC2	A0PJX2	215 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	ERVH48-1	M5A8F1	160 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	WASL	O00401	505 aa	Predicted RBP	3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	HR	O43593	1189 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	ZPR1	O75312	459 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	INHA	P05111	366 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	DNAJA1	P31689	397 aa	Known RBP	3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	SCNN1D	P51172	638 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	EMP3	P54852	163 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	GDF10	P55107	478 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	CCDC144B	Q3MJ40	725 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	COX20	Q5RI15	118 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	CC2D2B	Q6DHV5	1058 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	ALKBH8	Q96BT7	664 aa	Known RBP	3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	ARMC5	Q96C12	935 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	FAM129B	Q96TA1	746 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	SLC6A16	Q9GZN6	736 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	WBP1L	Q9NX94	342 aa		3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	TMA7	Q9Y2S6	64 aa	Known RBP	3.07	□□□□□ -1.92
CHD3-217	ENST00000574022	PNMA6F	A0A0J9YX94	578 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	FAM205C	A6NFA0	338 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	TNFRSF10B	O14763	440 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	ZBTB39	O15060	712 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	GPR182	O15218	404 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	TLL1	O43897	1013 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	STAU1	O95793	577 aa	Known RBP	3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	IGHA2	P01877	340 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	BRD2	P25440	801 aa	Known RBP	3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	GNA15	P30679	374 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	USP5	P45974	858 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	TNNI2	P48788	182 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	EPHA4	P54764	986 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	ERVK-9	P63128	1117 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	SH3BP2	P78314	561 aa		3.06	□□□□□ -1.92
CHD3-217	ENST00000574022	ARID5A	Q03989	594 aa		3.06	□□□□□ -1.92

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