RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 GPR162Q16538 588 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 LTV1Q96GA3 475 aaPredicted RBP8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 COG3Q96JB2 828 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 TFCP2L1Q9NZI6 479 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 SYTL4Q96C24 671 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
CACNA1A-203ENST00000573891 LY75O60449 1722 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 SHANK3Q9BYB0 1731 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 ST20-MTHFSA0A0A6YYL1 179 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 FBLN1P23142 703 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 AMPHP49418 695 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 CGNL1Q0VF96 1302 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 USP47Q96K76 1375 aa8.47□□□□□ -1.05
CACNA1A-203ENST00000573891 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-203ENST00000573891 NBPF6Q5VWK0 638 aa8.46□□□□□ -1.06
CACNA1A-203ENST00000573891 NBPF4Q96M43 638 aa8.46□□□□□ -1.06
CACNA1A-203ENST00000573891 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
CACNA1A-203ENST00000573891 FYB1O15117 783 aa8.45□□□□□ -1.06
CACNA1A-203ENST00000573891 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
CACNA1A-203ENST00000573891 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
CACNA1A-203ENST00000573891 GRIN3BO60391 1043 aa8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 RAPGEF4Q8WZA2 1011 aa8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 INSRP06213 1382 aa8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 KIF24Q5T7B8 1368 aa8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 SMG6Q86US8 1419 aaKnown RBP8.44□□□□□ -1.06
CACNA1A-203ENST00000573891 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 FLT4P35916 1363 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
CACNA1A-203ENST00000573891 CEP350Q5VT06 3117 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 CYP27B1O15528 508 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 HMGB2P26583 209 aaKnown RBP8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 HSP90AB2PQ58FF8 381 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
CACNA1A-203ENST00000573891 C5P01031 1676 aa8.41□□□□□ -1.06
CACNA1A-203ENST00000573891 TMF1P82094 1093 aa8.41□□□□□ -1.06
CACNA1A-203ENST00000573891 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
CACNA1A-203ENST00000573891 E2F4Q16254 413 aa8.41□□□□□ -1.06
CACNA1A-203ENST00000573891 FLAD1Q8NFF5 587 aa8.41□□□□□ -1.06
CACNA1A-203ENST00000573891 ATP10DQ9P241 1426 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 ADCY9O60503 1353 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 SEMA3EO15041 775 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 PPP1R37O75864 691 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 AMIGO3Q86WK7 504 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
CACNA1A-203ENST00000573891 PITPNM1O00562 1244 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 PIGBQ92521 554 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 C4BP0C0L5 1744 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 TOGARAM1Q9Y4F4 1720 aa8.39□□□□□ -1.07
CACNA1A-203ENST00000573891 NSD3Q9BZ95 1437 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 PKD1L3Q7Z443 1732 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 PSEN1P49768 467 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 PIP4P2Q8N4L2 257 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 AK7Q96M32 723 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
CACNA1A-203ENST00000573891 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 ZMYND10O75800 440 aa8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 SSFA2P28290 1259 aa8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 SIK1P57059 783 aa8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 KIF20BQ96Q89 1820 aa8.37□□□□□ -1.07
CACNA1A-203ENST00000573891 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 IGSF1Q8N6C5 1336 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 PHF14O94880 888 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 SMIM5Q71RC9 77 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 ZNF579Q8NAF0 562 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 LINC00116Q8NCU8 138 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
CACNA1A-203ENST00000573891 ANKRD26Q9UPS8 1709 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms