RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 CABP4P57796 275 aa28.75■■■□□ 2.19
HCFC1R1-205ENST00000573842 DCAF8L1A6NGE4 600 aa28.74■■■□□ 2.19
HCFC1R1-205ENST00000573842 FLAD1Q8NFF5 587 aa28.74■■■□□ 2.19
HCFC1R1-205ENST00000573842 ATG3Q9NT62 314 aa28.74■■■□□ 2.19
HCFC1R1-205ENST00000573842 COL23A1Q86Y22 540 aaPredicted RBP28.73■■■□□ 2.19
HCFC1R1-205ENST00000573842 FHDC1Q9C0D6 1143 aaPredicted RBP28.73■■■□□ 2.19
HCFC1R1-205ENST00000573842 ADAMTS7Q9UKP4 1686 aa28.73■■■□□ 2.19
HCFC1R1-205ENST00000573842 ATP6V1AP38606 617 aa28.72■■■□□ 2.19
HCFC1R1-205ENST00000573842 AKAP4Q5JQC9 854 aa28.72■■■□□ 2.19
HCFC1R1-205ENST00000573842 CFAP53Q96M91 514 aa28.72■■■□□ 2.19
HCFC1R1-205ENST00000573842 MRC1P22897 1456 aa28.72■■■□□ 2.19
HCFC1R1-205ENST00000573842 U2SURPO15042 1029 aaKnown RBP28.71■■■□□ 2.19
HCFC1R1-205ENST00000573842 CICQ96RK0 1608 aaPredicted RBP28.71■■■□□ 2.19
HCFC1R1-205ENST00000573842 MAP3K5Q99683 1374 aa28.71■■■□□ 2.19
HCFC1R1-205ENST00000573842 LINC00116Q8NCU8 138 aa28.7■■■□□ 2.18
HCFC1R1-205ENST00000573842 ITPK1Q13572 414 aa28.68■■■□□ 2.18
HCFC1R1-205ENST00000573842 SYT17Q9BSW7 474 aa28.68■■■□□ 2.18
HCFC1R1-205ENST00000573842 TJP1Q07157 1748 aa28.68■■■□□ 2.18
HCFC1R1-205ENST00000573842 RBM42Q9BTD8 480 aaKnown RBP28.67■■■□□ 2.18
HCFC1R1-205ENST00000573842 PHF14O94880 888 aa28.66■■■□□ 2.18
HCFC1R1-205ENST00000573842 SSFA2P28290 1259 aa28.65■■■□□ 2.18
HCFC1R1-205ENST00000573842 GNPATO15228 680 aa28.64■■■□□ 2.18
HCFC1R1-205ENST00000573842 PPP2R1AP30153 589 aa28.64■■■□□ 2.18
HCFC1R1-205ENST00000573842 MTHFSDQ2M296 383 aaKnown RBP28.64■■■□□ 2.18
HCFC1R1-205ENST00000573842 NFATC2IPQ8NCF5 419 aa28.64■■■□□ 2.18
HCFC1R1-205ENST00000573842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.63■■■□□ 2.17
HCFC1R1-205ENST00000573842 MSL1Q68DK7 614 aa28.63■■■□□ 2.17
HCFC1R1-205ENST00000573842 KLHL34Q8N239 644 aa28.63■■■□□ 2.17
HCFC1R1-205ENST00000573842 C4AP0C0L4 1744 aa28.62■■■□□ 2.17
HCFC1R1-205ENST00000573842 MYH14Q7Z406 1995 aaKnown RBP28.62■■■□□ 2.17
HCFC1R1-205ENST00000573842 UBR2Q8IWV8 1755 aa28.61■■■□□ 2.17
HCFC1R1-205ENST00000573842 AMIGO3Q86WK7 504 aa28.61■■■□□ 2.17
HCFC1R1-205ENST00000573842 SLC52A2Q9HAB3 445 aa28.61■■■□□ 2.17
HCFC1R1-205ENST00000573842 NUDCQ9Y266 331 aa28.61■■■□□ 2.17
HCFC1R1-205ENST00000573842 SIPA1L3O60292 1781 aaPredicted RBP28.6■■■□□ 2.17
HCFC1R1-205ENST00000573842 RNMTO43148 476 aaKnown RBP28.59■■■□□ 2.17
HCFC1R1-205ENST00000573842 GAS2L2Q8NHY3 880 aa28.59■■■□□ 2.17
HCFC1R1-205ENST00000573842 SLC4A9Q96Q91 983 aa28.59■■■□□ 2.17
HCFC1R1-205ENST00000573842 CNTNAP4Q9C0A0 1308 aa28.59■■■□□ 2.17
HCFC1R1-205ENST00000573842 PTCD1O75127 700 aaKnown RBP28.58■■■□□ 2.17
HCFC1R1-205ENST00000573842 LGR6Q9HBX8 967 aa28.58■■■□□ 2.17
HCFC1R1-205ENST00000573842 CHD4Q14839 1912 aa28.57■■■□□ 2.16
HCFC1R1-205ENST00000573842 UTRNP46939 3433 aa28.56■■■□□ 2.16
HCFC1R1-205ENST00000573842 RTCBQ9Y3I0 505 aaKnown RBP28.56■■■□□ 2.16
HCFC1R1-205ENST00000573842 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
HCFC1R1-205ENST00000573842 KCPQ6ZWJ8 1503 aa28.54■■■□□ 2.16
HCFC1R1-205ENST00000573842 PRKAR2BP31323 418 aa28.54■■■□□ 2.16
HCFC1R1-205ENST00000573842 RC3H1Q5TC82 1133 aaKnown RBP28.54■■■□□ 2.16
HCFC1R1-205ENST00000573842 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
HCFC1R1-205ENST00000573842 GNAT3A8MTJ3 354 aa28.52■■■□□ 2.16
HCFC1R1-205ENST00000573842 U2AF1L5P0DN76 240 aaPredicted RBP28.52■■■□□ 2.16
HCFC1R1-205ENST00000573842 ADRA2BP18089 450 aa28.52■■■□□ 2.16
HCFC1R1-205ENST00000573842 U2AF1Q01081 240 aaKnown RBP eCLIP28.52■■■□□ 2.16
HCFC1R1-205ENST00000573842 TRAPPC3LQ5T215 181 aa28.5■■■□□ 2.15
HCFC1R1-205ENST00000573842 GOLGB1Q14789 3259 aaKnown RBP28.48■■■□□ 2.15
HCFC1R1-205ENST00000573842 YY1P25490 414 aa28.48■■■□□ 2.15
HCFC1R1-205ENST00000573842 CRKLP46109 303 aaKnown RBP28.48■■■□□ 2.15
HCFC1R1-205ENST00000573842 TEFQ10587 303 aa28.48■■■□□ 2.15
HCFC1R1-205ENST00000573842 NLGN2Q8NFZ4 835 aa28.48■■■□□ 2.15
HCFC1R1-205ENST00000573842 RPS6KA4O75676 772 aa28.47■■■□□ 2.15
HCFC1R1-205ENST00000573842 SLC39A6Q13433 755 aa28.47■■■□□ 2.15
HCFC1R1-205ENST00000573842 DLG5Q8TDM6 1919 aa28.46■■■□□ 2.15
HCFC1R1-205ENST00000573842 FCHSD2O94868 740 aa28.46■■■□□ 2.15
HCFC1R1-205ENST00000573842 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
HCFC1R1-205ENST00000573842 PHACTR3Q96KR7 559 aa28.46■■■□□ 2.15
HCFC1R1-205ENST00000573842 KIF13BQ9NQT8 1826 aa28.46■■■□□ 2.15
HCFC1R1-205ENST00000573842 RFC4P35249 363 aa28.45■■■□□ 2.14
HCFC1R1-205ENST00000573842 GPR162Q16538 588 aa28.45■■■□□ 2.14
HCFC1R1-205ENST00000573842 CD2APQ9Y5K6 639 aa28.45■■■□□ 2.14
HCFC1R1-205ENST00000573842 CEMIPQ8WUJ3 1361 aa28.44■■■□□ 2.14
HCFC1R1-205ENST00000573842 DNAJC10Q8IXB1 793 aa28.43■■■□□ 2.14
HCFC1R1-205ENST00000573842 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
HCFC1R1-205ENST00000573842 IL17REQ8NFR9 667 aa28.43■■■□□ 2.14
HCFC1R1-205ENST00000573842 ARHGEF1Q92888 912 aaKnown RBP28.43■■■□□ 2.14
HCFC1R1-205ENST00000573842 VSIG10Q8N0Z9 540 aa28.41■■■□□ 2.14
HCFC1R1-205ENST00000573842 CCDC87Q9NVE4 849 aa28.41■■■□□ 2.14
HCFC1R1-205ENST00000573842 NEFMP07197 916 aa28.4■■■□□ 2.14
HCFC1R1-205ENST00000573842 DDX10Q13206 875 aaKnown RBP28.4■■■□□ 2.14
HCFC1R1-205ENST00000573842 RALBP1Q15311 655 aa28.4■■■□□ 2.14
HCFC1R1-205ENST00000573842 NLGN1Q8N2Q7 840 aa28.4■■■□□ 2.14
HCFC1R1-205ENST00000573842 MMP10P09238 476 aa28.39■■■□□ 2.14
HCFC1R1-205ENST00000573842 RTF1Q92541 710 aaKnown RBP28.39■■■□□ 2.14
HCFC1R1-205ENST00000573842 INTS5Q6P9B9 1019 aaKnown RBP28.38■■■□□ 2.13
HCFC1R1-205ENST00000573842 CYP19A1P11511 503 aaPredicted RBP28.37■■■□□ 2.13
HCFC1R1-205ENST00000573842 GYS1P13807 737 aa28.37■■■□□ 2.13
HCFC1R1-205ENST00000573842 ZNF790Q6PG37 636 aa28.37■■■□□ 2.13
HCFC1R1-205ENST00000573842 USP42Q9H9J4 1324 aaKnown RBP28.36■■■□□ 2.13
HCFC1R1-205ENST00000573842 KIAA1551Q9HCM1 1747 aa28.35■■■□□ 2.13
HCFC1R1-205ENST00000573842 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
HCFC1R1-205ENST00000573842 COL15A1P39059 1388 aa28.35■■■□□ 2.13
HCFC1R1-205ENST00000573842 HEG1Q9ULI3 1381 aa28.35■■■□□ 2.13
HCFC1R1-205ENST00000573842 N4BP2Q86UW6 1770 aaPredicted RBP28.34■■■□□ 2.13
HCFC1R1-205ENST00000573842 BTBD11A6QL63 1104 aa28.33■■■□□ 2.13
HCFC1R1-205ENST00000573842 ZNF496Q96IT1 587 aaPredicted RBP28.33■■■□□ 2.13
HCFC1R1-205ENST00000573842 C10orf71Q711Q0 1435 aa28.33■■■□□ 2.13
HCFC1R1-205ENST00000573842 HTATSF1O43719 755 aaKnown RBP28.32■■■□□ 2.12
HCFC1R1-205ENST00000573842 STARD3NLO95772 234 aa28.32■■■□□ 2.12
HCFC1R1-205ENST00000573842 FMNL2Q96PY5 1086 aa28.32■■■□□ 2.12
HCFC1R1-205ENST00000573842 SRP68Q9UHB9 627 aaKnown RBP28.32■■■□□ 2.12
HCFC1R1-205ENST00000573842 ZBTB1Q9Y2K1 713 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms