RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PHF14O94880 888 aa15.94■□□□□ 0.14
NDE1-206ENST00000572967 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
NDE1-206ENST00000572967 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
NDE1-206ENST00000572967 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 SIK1P57059 783 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 RALBP1Q15311 655 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
NDE1-206ENST00000572967 SULT6B1Q6IMI4 303 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
NDE1-206ENST00000572967 CICQ96RK0 1608 aaPredicted RBP15.93■□□□□ 0.14
NDE1-206ENST00000572967 IL13P35225 146 aa15.92■□□□□ 0.14
NDE1-206ENST00000572967 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
NDE1-206ENST00000572967 MTHFSP49914 203 aa15.91■□□□□ 0.14
NDE1-206ENST00000572967 ITPK1Q13572 414 aa15.91■□□□□ 0.14
NDE1-206ENST00000572967 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
NDE1-206ENST00000572967 MRC1P22897 1456 aa15.91■□□□□ 0.14
NDE1-206ENST00000572967 ADAMTS7Q9UKP4 1686 aa15.9■□□□□ 0.14
NDE1-206ENST00000572967 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
NDE1-206ENST00000572967 DCAF5Q96JK2 942 aa15.9■□□□□ 0.14
NDE1-206ENST00000572967 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
NDE1-206ENST00000572967 GNPATO15228 680 aa15.89■□□□□ 0.13
NDE1-206ENST00000572967 HMOX1P09601 288 aa15.89■□□□□ 0.13
NDE1-206ENST00000572967 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
NDE1-206ENST00000572967 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
NDE1-206ENST00000572967 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
NDE1-206ENST00000572967 NLGN2Q8NFZ4 835 aa15.89■□□□□ 0.13
NDE1-206ENST00000572967 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
NDE1-206ENST00000572967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.88■□□□□ 0.13
NDE1-206ENST00000572967 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
NDE1-206ENST00000572967 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
NDE1-206ENST00000572967 CABP4P57796 275 aa15.87■□□□□ 0.13
NDE1-206ENST00000572967 FLAD1Q8NFF5 587 aa15.87■□□□□ 0.13
NDE1-206ENST00000572967 PRKRIP1Q9H875 184 aaPredicted RBP15.87■□□□□ 0.13
NDE1-206ENST00000572967 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
NDE1-206ENST00000572967 SSFA2P28290 1259 aa15.86■□□□□ 0.13
NDE1-206ENST00000572967 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
NDE1-206ENST00000572967 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
NDE1-206ENST00000572967 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
NDE1-206ENST00000572967 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
NDE1-206ENST00000572967 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
NDE1-206ENST00000572967 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
NDE1-206ENST00000572967 DIAPH1O60610 1272 aaKnown RBP15.84■□□□□ 0.13
NDE1-206ENST00000572967 GPR162Q16538 588 aa15.84■□□□□ 0.13
NDE1-206ENST00000572967 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
NDE1-206ENST00000572967 N4BP2Q86UW6 1770 aaPredicted RBP15.83■□□□□ 0.12
NDE1-206ENST00000572967 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
NDE1-206ENST00000572967 PTCD1O75127 700 aaKnown RBP15.82■□□□□ 0.12
NDE1-206ENST00000572967 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
NDE1-206ENST00000572967 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
NDE1-206ENST00000572967 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
NDE1-206ENST00000572967 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
NDE1-206ENST00000572967 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
NDE1-206ENST00000572967 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
NDE1-206ENST00000572967 YBX3P16989 372 aaKnown RBP eCLIP15.79■□□□□ 0.12
NDE1-206ENST00000572967 MTHFSDQ2M296 383 aaKnown RBP15.79■□□□□ 0.12
NDE1-206ENST00000572967 SLC52A2Q9HAB3 445 aa15.79■□□□□ 0.12
NDE1-206ENST00000572967 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
NDE1-206ENST00000572967 WWC3Q9ULE0 1092 aa15.79■□□□□ 0.12
NDE1-206ENST00000572967 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
NDE1-206ENST00000572967 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
NDE1-206ENST00000572967 PPP2R1AP30153 589 aa15.78■□□□□ 0.12
NDE1-206ENST00000572967 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
NDE1-206ENST00000572967 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
NDE1-206ENST00000572967 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
NDE1-206ENST00000572967 MMP10P09238 476 aa15.76■□□□□ 0.11
NDE1-206ENST00000572967 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
NDE1-206ENST00000572967 CD2APQ9Y5K6 639 aa15.76■□□□□ 0.11
NDE1-206ENST00000572967 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
NDE1-206ENST00000572967 C10orf71Q711Q0 1435 aa15.76■□□□□ 0.11
NDE1-206ENST00000572967 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
NDE1-206ENST00000572967 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
NDE1-206ENST00000572967 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
NDE1-206ENST00000572967 RPS6KA4O75676 772 aa15.74■□□□□ 0.11
NDE1-206ENST00000572967 ADRA2BP18089 450 aa15.74■□□□□ 0.11
NDE1-206ENST00000572967 RFC4P35249 363 aa15.74■□□□□ 0.11
NDE1-206ENST00000572967 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
NDE1-206ENST00000572967 ARHGEF1Q92888 912 aaKnown RBP15.74■□□□□ 0.11
NDE1-206ENST00000572967 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
NDE1-206ENST00000572967 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
NDE1-206ENST00000572967 MRS2Q9HD23 443 aa15.73■□□□□ 0.11
NDE1-206ENST00000572967 SRP68Q9UHB9 627 aaKnown RBP15.73■□□□□ 0.11
NDE1-206ENST00000572967 GYS1P13807 737 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 MIER1Q8N108 512 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 NUDCQ9Y266 331 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 COL15A1P39059 1388 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
NDE1-206ENST00000572967 USP42Q9H9J4 1324 aaKnown RBP15.71■□□□□ 0.11
NDE1-206ENST00000572967 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
NDE1-206ENST00000572967 CCDC87Q9NVE4 849 aa15.71■□□□□ 0.11
NDE1-206ENST00000572967 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.1
NDE1-206ENST00000572967 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
NDE1-206ENST00000572967 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
NDE1-206ENST00000572967 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
NDE1-206ENST00000572967 NRXN2Q9P2S2 1712 aa15.69■□□□□ 0.1
NDE1-206ENST00000572967 GRIN3BO60391 1043 aa15.69■□□□□ 0.1
NDE1-206ENST00000572967 TEFQ10587 303 aa15.69■□□□□ 0.1
NDE1-206ENST00000572967 INTS5Q6P9B9 1019 aaKnown RBP15.69■□□□□ 0.1
NDE1-206ENST00000572967 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms