RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
NPLOC4-210ENST00000572824 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
NPLOC4-210ENST00000572824 RGPD4Q7Z3J3 1758 aa13.16□□□□□ -0.3
NPLOC4-210ENST00000572824 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
NPLOC4-210ENST00000572824 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
NPLOC4-210ENST00000572824 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 CASZ1Q86V15 1759 aa13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
NPLOC4-210ENST00000572824 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
NPLOC4-210ENST00000572824 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-210ENST00000572824 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-210ENST00000572824 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 MYOM1P52179 1685 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 FBLN1P23142 703 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
NPLOC4-210ENST00000572824 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 FAM208AQ9UK61 1670 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 BTAF1O14981 1849 aa13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 TESK2Q96S53 571 aa13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 PDGFDQ9GZP0 370 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-210ENST00000572824 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
NPLOC4-210ENST00000572824 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
NPLOC4-210ENST00000572824 ABCC6O95255 1503 aa13.11□□□□□ -0.31
NPLOC4-210ENST00000572824 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
NPLOC4-210ENST00000572824 TBC1D12O60347 775 aa13.1□□□□□ -0.31
NPLOC4-210ENST00000572824 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
NPLOC4-210ENST00000572824 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-210ENST00000572824 DDB1Q16531 1140 aa13.1□□□□□ -0.31
NPLOC4-210ENST00000572824 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 KCNQ2O43526 872 aa13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 MLLT3P42568 568 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 EDC4Q6P2E9 1401 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 ERBB3P21860 1342 aa13.09□□□□□ -0.31
NPLOC4-210ENST00000572824 PARD3Q8TEW0 1356 aa13.08□□□□□ -0.31
NPLOC4-210ENST00000572824 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
NPLOC4-210ENST00000572824 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
NPLOC4-210ENST00000572824 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
NPLOC4-210ENST00000572824 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
NPLOC4-210ENST00000572824 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
NPLOC4-210ENST00000572824 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-210ENST00000572824 LHX8Q68G74 356 aa13.07□□□□□ -0.32
NPLOC4-210ENST00000572824 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
NPLOC4-210ENST00000572824 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
NPLOC4-210ENST00000572824 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
NPLOC4-210ENST00000572824 EVI5O60447 810 aa13.06□□□□□ -0.32
NPLOC4-210ENST00000572824 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
NPLOC4-210ENST00000572824 ANKRD24Q8TF21 1146 aa13.05□□□□□ -0.32
NPLOC4-210ENST00000572824 LTV1Q96GA3 475 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-210ENST00000572824 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
NPLOC4-210ENST00000572824 USP47Q96K76 1375 aa13.05□□□□□ -0.32
NPLOC4-210ENST00000572824 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
NPLOC4-210ENST00000572824 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
NPLOC4-210ENST00000572824 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-210ENST00000572824 MEGF6O75095 1541 aa13.03□□□□□ -0.32
NPLOC4-210ENST00000572824 PTGER2P43116 358 aa13.03□□□□□ -0.32
NPLOC4-210ENST00000572824 BCL9O00512 1426 aa13.03□□□□□ -0.32
NPLOC4-210ENST00000572824 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
NPLOC4-210ENST00000572824 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-210ENST00000572824 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-210ENST00000572824 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
NPLOC4-210ENST00000572824 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 EXOC5O00471 708 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 ZBTB7AO95365 584 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 TXNRD1Q16881 649 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 USHBP1Q8N6Y0 703 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
NPLOC4-210ENST00000572824 PLSCR1O15162 318 aa12.99□□□□□ -0.33
NPLOC4-210ENST00000572824 IL2RBP14784 551 aa12.99□□□□□ -0.33
NPLOC4-210ENST00000572824 KCNQ4P56696 695 aa12.99□□□□□ -0.33
NPLOC4-210ENST00000572824 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
NPLOC4-210ENST00000572824 LY75O60449 1722 aa12.99□□□□□ -0.33
NPLOC4-210ENST00000572824 UTRNP46939 3433 aa12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 HOXC9P31274 260 aa12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 IP6K1Q92551 441 aa12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-210ENST00000572824 NSD2O96028 1365 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 DDX12PQ92771 950 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
NPLOC4-210ENST00000572824 SNPHO15079 494 aa12.96□□□□□ -0.33
NPLOC4-210ENST00000572824 FYB1O15117 783 aa12.96□□□□□ -0.33
NPLOC4-210ENST00000572824 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
NPLOC4-210ENST00000572824 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-210ENST00000572824 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
NPLOC4-210ENST00000572824 COG3Q96JB2 828 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms