RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.95□□□□□ -1.46
NDE1-204ENST00000572503 DDX19BQ9UMR2 479 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 LAS1LQ9Y4W2 734 aaKnown RBP5.95□□□□□ -1.46
NDE1-204ENST00000572503 PXDNLA1KZ92 1463 aa5.95□□□□□ -1.46
NDE1-204ENST00000572503 ATP10DQ9P241 1426 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 RNMTO43148 476 aaKnown RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 CANXP27824 592 aaKnown RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 HDAC1Q13547 482 aaPredicted RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 TAF7Q15545 349 aaPredicted RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 PLEKHO1Q53GL0 409 aaPredicted RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 INTS3Q68E01 1043 aaKnown RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 ZNF530Q6P9A1 599 aaPredicted RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 SKAP1Q86WV1 359 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 RTF1Q92541 710 aaKnown RBP5.94□□□□□ -1.46
NDE1-204ENST00000572503 LGR6Q9HBX8 967 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 MIS18AQ9NYP9 233 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 TSPYL4Q9UJ04 414 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 PHLPP1O60346 1717 aa5.94□□□□□ -1.46
NDE1-204ENST00000572503 DISP2A7MBM2 1401 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 TUBGCP6Q96RT7 1819 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 ELL2O00472 640 aaPredicted RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 ZBTB7BO15156 539 aaPredicted RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 HOXB7P09629 217 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 HAP1P54257 671 aaPredicted RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 EIF4A1P60842 406 aaKnown RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 LMOD2Q6P5Q4 547 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 SMC5Q8IY18 1101 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 FTSJ3Q8IY81 847 aaKnown RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 API5Q9BZZ5 524 aaKnown RBP5.93□□□□□ -1.46
NDE1-204ENST00000572503 PTPRCP08575 1304 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 WDR17Q8IZU2 1322 aa5.93□□□□□ -1.46
NDE1-204ENST00000572503 ITGB4P16144 1822 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 NWD2Q9ULI1 1742 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 EVX2Q03828 476 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 CHRNA2Q15822 529 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 G2E3Q7L622 706 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 BACH2Q9BYV9 841 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 LRP6O75581 1613 aa5.92□□□□□ -1.46
NDE1-204ENST00000572503 KCPQ6ZWJ8 1503 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 ZBTB7CA1YPR0 619 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 CYP27B1O15528 508 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 KCNQ3O43525 872 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 PHKG2P15735 406 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 ITPRIPQ8IWB1 547 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 SIRT2Q8IXJ6 389 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 CARD10Q9BWT7 1032 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 IBTKQ9P2D0 1353 aaPredicted RBP5.91□□□□□ -1.46
NDE1-204ENST00000572503 NUP188Q5SRE5 1749 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 TNS2Q63HR2 1409 aa5.91□□□□□ -1.46
NDE1-204ENST00000572503 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
NDE1-204ENST00000572503 PDE4AP27815 886 aa5.9□□□□□ -1.46
NDE1-204ENST00000572503 NKX1-1Q15270 411 aaPredicted RBP5.9□□□□□ -1.46
NDE1-204ENST00000572503 C8orf34Q49A92 452 aa5.9□□□□□ -1.46
NDE1-204ENST00000572503 MPRIPQ6WCQ1 1025 aa5.9□□□□□ -1.46
NDE1-204ENST00000572503 RWDD1Q9H446 243 aaPredicted RBP5.9□□□□□ -1.46
NDE1-204ENST00000572503 NLRP2Q9NX02 1062 aa5.9□□□□□ -1.46
NDE1-204ENST00000572503 PDZRN3Q9UPQ7 1066 aa5.9□□□□□ -1.46
NDE1-204ENST00000572503 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.9□□□□□ -1.47
NDE1-204ENST00000572503 CICQ96RK0 1608 aaPredicted RBP5.89□□□□□ -1.47
NDE1-204ENST00000572503 ARFGEF2Q9Y6D5 1785 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 GIGYF1O75420 1035 aaPredicted RBP5.89□□□□□ -1.47
NDE1-204ENST00000572503 SLC4A2P04920 1241 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 FLIIQ13045 1269 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 C1orf141Q5JVX7 400 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 POTEGQ6S5H5 508 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 IFNL2Q8IZJ0 200 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 RAPGEF4Q8WZA2 1011 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 SLC52A2Q9HAB3 445 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 PRDM11Q9NQV5 511 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 SPG7Q9UQ90 795 aa5.89□□□□□ -1.47
NDE1-204ENST00000572503 BTBD11A6QL63 1104 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 CAPN15O75808 1086 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 PLEKHG5O94827 1062 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 NUCB1Q02818 461 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 TEFQ10587 303 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 PDIA6Q15084 440 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 LRP10Q7Z4F1 713 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 ANKRD44Q8N8A2 993 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 DCAF5Q96JK2 942 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 MEIS3Q99687 375 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 CHMP4BQ9H444 224 aaKnown RBP5.88□□□□□ -1.47
NDE1-204ENST00000572503 ADCY9O60503 1353 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 SLIT2O94813 1529 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 TJP1Q07157 1748 aa5.88□□□□□ -1.47
NDE1-204ENST00000572503 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
NDE1-204ENST00000572503 F6X3S4 739 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 HSP90AB1P08238 724 aaKnown RBP5.87□□□□□ -1.47
NDE1-204ENST00000572503 CCT4P50991 539 aaKnown RBP5.87□□□□□ -1.47
NDE1-204ENST00000572503 FAM161AQ3B820 660 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 CEP85Q6P2H3 762 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 LARP1Q6PKG0 1096 aaKnown RBP5.87□□□□□ -1.47
NDE1-204ENST00000572503 PIP4P2Q8N4L2 257 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 C1orf115Q9H7X2 142 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 PCDH11XQ9BZA7 1347 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 PCDH11YQ9BZA8 1340 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 RREB1Q92766 1687 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 DOT1LQ8TEK3 1739 aa5.87□□□□□ -1.47
NDE1-204ENST00000572503 PRAMEF22A3QJZ6 481 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms