RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 C1orf141Q5JVX7 400 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 TMEM57Q8N5G2 664 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 API5Q9BZZ5 524 aaKnown RBP7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 MIS18AQ9NYP9 233 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 DDX19BQ9UMR2 479 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 ABCC4O15439 1325 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 PAPPAQ13219 1627 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 RNMTO43148 476 aaKnown RBP7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 RAPGEF4Q8WZA2 1011 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 PRDM11Q9NQV5 511 aa7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
TRAPPC1-204ENST00000571947 MRC1P22897 1456 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 WDR17Q8IZU2 1322 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 TOGARAM1Q9Y4F4 1720 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 RGS12O14924 1447 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 TCERG1O14776 1098 aaKnown RBP7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 IGHDP01880 384 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 ITPRIPQ8IWB1 547 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 CHMP4BQ9H444 224 aaKnown RBP7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
TRAPPC1-204ENST00000571947 PTPRCP08575 1304 aa7.8□□□□□ -1.16
TRAPPC1-204ENST00000571947 KDM6AO15550 1401 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC1-204ENST00000571947 TEFQ10587 303 aa7.8□□□□□ -1.16
TRAPPC1-204ENST00000571947 MPRIPQ6WCQ1 1025 aa7.8□□□□□ -1.16
TRAPPC1-204ENST00000571947 RWDD1Q9H446 243 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC1-204ENST00000571947 HOXB7P09629 217 aa7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 PHKG2P15735 406 aa7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 EIF4A1P60842 406 aaKnown RBP7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 CCDC30Q5VVM6 783 aa7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 IFNL2Q8IZJ0 200 aa7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 ZBTB40Q9NUA8 1239 aa7.79□□□□□ -1.16
TRAPPC1-204ENST00000571947 BTBD11A6QL63 1104 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 ZBTB7BO15156 539 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 SLC4A2P04920 1241 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 HDAC1Q13547 482 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 TOM1L2Q6ZVM7 507 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 CARD10Q9BWT7 1032 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 STK31Q9BXU1 1019 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 HEG1Q9ULI3 1381 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 PXDNLA1KZ92 1463 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 GLI3P10071 1580 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 ARFGEF2Q9Y6D5 1785 aa7.78□□□□□ -1.16
TRAPPC1-204ENST00000571947 KCNQ3O43525 872 aa7.77□□□□□ -1.17
TRAPPC1-204ENST00000571947 HSP90AB1P08238 724 aaKnown RBP7.77□□□□□ -1.17
TRAPPC1-204ENST00000571947 G2E3Q7L622 706 aa7.77□□□□□ -1.17
TRAPPC1-204ENST00000571947 AK9Q5TCS8 1911 aa7.77□□□□□ -1.17
TRAPPC1-204ENST00000571947 DOT1LQ8TEK3 1739 aa7.77□□□□□ -1.17
TRAPPC1-204ENST00000571947 TUBGCP6Q96RT7 1819 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 NUP188Q5SRE5 1749 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 CYP27B1O15528 508 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 TOM1O60784 492 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 EVA1CP58658 441 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 DCAF5Q96JK2 942 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 LRP6O75581 1613 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 PCDH11XQ9BZA7 1347 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 PCDH11YQ9BZA8 1340 aa7.76□□□□□ -1.17
TRAPPC1-204ENST00000571947 IL2RBP14784 551 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 CCT4P50991 539 aaKnown RBP7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 FLIIQ13045 1269 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 SKAP1Q86WV1 359 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 SMC5Q8IY18 1101 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 ZCRB1Q8TBF4 217 aaKnown RBP7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 DISP2A7MBM2 1401 aa7.75□□□□□ -1.17
TRAPPC1-204ENST00000571947 GIGYF1O75420 1035 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 NKX1-1Q15270 411 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 NECTIN2Q92692 538 aa7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 BTG4Q9NY30 223 aa7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 U3KPZ7 1027 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 ANKRD36CQ5JPF3 1778 aa7.74□□□□□ -1.17
TRAPPC1-204ENST00000571947 ATP10DQ9P241 1426 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 ERVV-2B6SEH9 535 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 F6X3S4 739 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 EIF2S2P20042 333 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 PDE4AP27815 886 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 RGS3P49796 1198 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 ZNF790Q6PG37 636 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 KCPQ6ZWJ8 1503 aa7.73□□□□□ -1.17
TRAPPC1-204ENST00000571947 CABP4P57796 275 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 SLC39A6Q13433 755 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 RPAP2Q8IXW5 612 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 ANKRD44Q8N8A2 993 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 GCC1Q96CN9 775 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms