RNA–Protein interactions for RNA: ENST00000571617.1

P4HB-216, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 3

Gene P4HB, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-216ENST00000571617 CABP4P57796 275 aa28.29■■■□□ 2.12
P4HB-216ENST00000571617 MAP3K5Q99683 1374 aa28.28■■■□□ 2.12
P4HB-216ENST00000571617 POLD1P28340 1107 aa28.28■■■□□ 2.12
P4HB-216ENST00000571617 AKAP4Q5JQC9 854 aa28.28■■■□□ 2.12
P4HB-216ENST00000571617 AK7Q96M32 723 aa28.28■■■□□ 2.12
P4HB-216ENST00000571617 SYT17Q9BSW7 474 aa28.28■■■□□ 2.12
P4HB-216ENST00000571617 MSH5O43196 834 aa28.27■■■□□ 2.12
P4HB-216ENST00000571617 ATP6V1AP38606 617 aa28.27■■■□□ 2.12
P4HB-216ENST00000571617 LINC00116Q8NCU8 138 aa28.27■■■□□ 2.12
P4HB-216ENST00000571617 COL5A3P25940 1745 aaPredicted RBP28.26■■■□□ 2.12
P4HB-216ENST00000571617 ITPK1Q13572 414 aa28.26■■■□□ 2.11
P4HB-216ENST00000571617 ADAMTS7Q9UKP4 1686 aa28.25■■■□□ 2.11
P4HB-216ENST00000571617 DCAF8L1A6NGE4 600 aa28.24■■■□□ 2.11
P4HB-216ENST00000571617 MRC1P22897 1456 aa28.22■■■□□ 2.11
P4HB-216ENST00000571617 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
P4HB-216ENST00000571617 CFAP53Q96M91 514 aa28.22■■■□□ 2.11
P4HB-216ENST00000571617 U2SURPO15042 1029 aaKnown RBP28.21■■■□□ 2.11
P4HB-216ENST00000571617 SSFA2P28290 1259 aa28.21■■■□□ 2.11
P4HB-216ENST00000571617 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
P4HB-216ENST00000571617 AMIGO3Q86WK7 504 aa28.21■■■□□ 2.11
P4HB-216ENST00000571617 RBM42Q9BTD8 480 aaKnown RBP28.21■■■□□ 2.11
P4HB-216ENST00000571617 CICQ96RK0 1608 aaPredicted RBP28.21■■■□□ 2.11
P4HB-216ENST00000571617 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
P4HB-216ENST00000571617 SLC4A9Q96Q91 983 aa28.2■■■□□ 2.1
P4HB-216ENST00000571617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.19■■■□□ 2.1
P4HB-216ENST00000571617 PHF14O94880 888 aa28.18■■■□□ 2.1
P4HB-216ENST00000571617 MYH14Q7Z406 1995 aaKnown RBP28.17■■■□□ 2.1
P4HB-216ENST00000571617 GNPATO15228 680 aa28.17■■■□□ 2.1
P4HB-216ENST00000571617 RNMTO43148 476 aaKnown RBP28.17■■■□□ 2.1
P4HB-216ENST00000571617 SLC52A2Q9HAB3 445 aa28.17■■■□□ 2.1
P4HB-216ENST00000571617 LGR6Q9HBX8 967 aa28.17■■■□□ 2.1
P4HB-216ENST00000571617 TJP1Q07157 1748 aa28.16■■■□□ 2.1
P4HB-216ENST00000571617 MSL1Q68DK7 614 aa28.16■■■□□ 2.1
P4HB-216ENST00000571617 RC3H1Q5TC82 1133 aaKnown RBP28.14■■■□□ 2.1
P4HB-216ENST00000571617 SMIM5Q71RC9 77 aa28.14■■■□□ 2.1
P4HB-216ENST00000571617 CNTNAP4Q9C0A0 1308 aa28.14■■■□□ 2.09
P4HB-216ENST00000571617 PTCD1O75127 700 aaKnown RBP28.13■■■□□ 2.09
P4HB-216ENST00000571617 NUDCQ9Y266 331 aa28.13■■■□□ 2.09
P4HB-216ENST00000571617 KLHL34Q8N239 644 aa28.12■■■□□ 2.09
P4HB-216ENST00000571617 GAS2L2Q8NHY3 880 aa28.12■■■□□ 2.09
P4HB-216ENST00000571617 RTCBQ9Y3I0 505 aaKnown RBP28.11■■■□□ 2.09
P4HB-216ENST00000571617 SIPA1L3O60292 1781 aaPredicted RBP28.1■■■□□ 2.09
P4HB-216ENST00000571617 UBR2Q8IWV8 1755 aa28.1■■■□□ 2.09
P4HB-216ENST00000571617 RSPH6AQ9H0K4 717 aa28.1■■■□□ 2.09
P4HB-216ENST00000571617 C4AP0C0L4 1744 aa28.09■■■□□ 2.09
P4HB-216ENST00000571617 CHD4Q14839 1912 aa28.09■■■□□ 2.09
P4HB-216ENST00000571617 ADRA2BP18089 450 aa28.08■■■□□ 2.09
P4HB-216ENST00000571617 PRKAR2BP31323 418 aa28.08■■■□□ 2.09
P4HB-216ENST00000571617 GNAT3A8MTJ3 354 aa28.07■■■□□ 2.08
P4HB-216ENST00000571617 TRAPPC3LQ5T215 181 aa28.07■■■□□ 2.08
P4HB-216ENST00000571617 KCPQ6ZWJ8 1503 aa28.07■■■□□ 2.08
P4HB-216ENST00000571617 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
P4HB-216ENST00000571617 U2AF1L5P0DN76 240 aaPredicted RBP28.06■■■□□ 2.08
P4HB-216ENST00000571617 U2AF1Q01081 240 aaKnown RBP eCLIP28.06■■■□□ 2.082e-6■□□□□ 9.2
P4HB-216ENST00000571617 NLGN2Q8NFZ4 835 aa28.05■■■□□ 2.08
P4HB-216ENST00000571617 PHACTR3Q96KR7 559 aa28.05■■■□□ 2.08
P4HB-216ENST00000571617 YY1P25490 414 aa28.04■■■□□ 2.08
P4HB-216ENST00000571617 CRKLP46109 303 aaKnown RBP28.04■■■□□ 2.08
P4HB-216ENST00000571617 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
P4HB-216ENST00000571617 FCHSD2O94868 740 aa28.03■■■□□ 2.08
P4HB-216ENST00000571617 IL17REQ8NFR9 667 aa28.03■■■□□ 2.08
P4HB-216ENST00000571617 CD2APQ9Y5K6 639 aa28.03■■■□□ 2.08
P4HB-216ENST00000571617 ARHGEF1Q92888 912 aaKnown RBP28.02■■■□□ 2.08
P4HB-216ENST00000571617 CEMIPQ8WUJ3 1361 aa28■■■□□ 2.07
P4HB-216ENST00000571617 TEFQ10587 303 aa28■■■□□ 2.07
P4HB-216ENST00000571617 UTRNP46939 3433 aa28■■■□□ 2.07
P4HB-216ENST00000571617 RFC4P35249 363 aa27.99■■■□□ 2.07
P4HB-216ENST00000571617 GPR162Q16538 588 aa27.99■■■□□ 2.07
P4HB-216ENST00000571617 DNAJC10Q8IXB1 793 aa27.99■■■□□ 2.07
P4HB-216ENST00000571617 VSIG10Q8N0Z9 540 aa27.99■■■□□ 2.07
P4HB-216ENST00000571617 KIF13BQ9NQT8 1826 aa27.98■■■□□ 2.07
P4HB-216ENST00000571617 INTS5Q6P9B9 1019 aaKnown RBP27.98■■■□□ 2.07
P4HB-216ENST00000571617 NLGN1Q8N2Q7 840 aa27.98■■■□□ 2.07
P4HB-216ENST00000571617 TTC5Q8N0Z6 440 aa27.96■■■□□ 2.07
P4HB-216ENST00000571617 CCDC87Q9NVE4 849 aa27.96■■■□□ 2.07
P4HB-216ENST00000571617 DLG5Q8TDM6 1919 aa27.95■■■□□ 2.06
P4HB-216ENST00000571617 MMP10P09238 476 aa27.95■■■□□ 2.06
P4HB-216ENST00000571617 CYP19A1P11511 503 aaPredicted RBP27.95■■■□□ 2.06
P4HB-216ENST00000571617 GYS1P13807 737 aa27.95■■■□□ 2.06
P4HB-216ENST00000571617 DDX10Q13206 875 aaKnown RBP27.94■■■□□ 2.06
P4HB-216ENST00000571617 RALBP1Q15311 655 aa27.94■■■□□ 2.06
P4HB-216ENST00000571617 ZNF790Q6PG37 636 aa27.94■■■□□ 2.06
P4HB-216ENST00000571617 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
P4HB-216ENST00000571617 GOLGB1Q14789 3259 aaKnown RBP27.93■■■□□ 2.06
P4HB-216ENST00000571617 SOS1Q07889 1333 aaPredicted RBP27.92■■■□□ 2.06
P4HB-216ENST00000571617 USP42Q9H9J4 1324 aaKnown RBP27.92■■■□□ 2.06
P4HB-216ENST00000571617 RTF1Q92541 710 aaKnown RBP27.91■■■□□ 2.06
P4HB-216ENST00000571617 HEG1Q9ULI3 1381 aa27.9■■■□□ 2.06
P4HB-216ENST00000571617 ZNF496Q96IT1 587 aaPredicted RBP27.9■■■□□ 2.06
P4HB-216ENST00000571617 HTATSF1O43719 755 aaKnown RBP27.89■■■□□ 2.06
P4HB-216ENST00000571617 YBX3P16989 372 aaKnown RBP eCLIP27.89■■■□□ 2.062e-12■■□□□ 12.3
P4HB-216ENST00000571617 NEFMP07197 916 aa27.88■■■□□ 2.05
P4HB-216ENST00000571617 KIAA1551Q9HCM1 1747 aa27.88■■■□□ 2.05
P4HB-216ENST00000571617 SRP68Q9UHB9 627 aaKnown RBP27.88■■■□□ 2.05
P4HB-216ENST00000571617 ZBTB1Q9Y2K1 713 aa27.88■■■□□ 2.05
P4HB-216ENST00000571617 BTBD11A6QL63 1104 aa27.87■■■□□ 2.05
P4HB-216ENST00000571617 GRIN3BO60391 1043 aa27.87■■■□□ 2.05
P4HB-216ENST00000571617 STARD3NLO95772 234 aa27.87■■■□□ 2.05
P4HB-216ENST00000571617 MCM10Q7L590 875 aa27.87■■■□□ 2.05
P4HB-216ENST00000571617 TEX13AQ9BXU3 409 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms