RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
PRPF8-202ENST00000571346 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 HMOX1P09601 288 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 YY1P25490 414 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 ATP6V1AP38606 617 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 ATG3Q9NT62 314 aa18.47■□□□□ 0.55
PRPF8-202ENST00000571346 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
PRPF8-202ENST00000571346 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
PRPF8-202ENST00000571346 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
PRPF8-202ENST00000571346 CABP4P57796 275 aa18.46■□□□□ 0.55
PRPF8-202ENST00000571346 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
PRPF8-202ENST00000571346 GNPATO15228 680 aa18.45■□□□□ 0.54
PRPF8-202ENST00000571346 DIAPH1O60610 1272 aaKnown RBP18.45■□□□□ 0.54
PRPF8-202ENST00000571346 ITPK1Q13572 414 aa18.45■□□□□ 0.54
PRPF8-202ENST00000571346 AMIGO3Q86WK7 504 aa18.45■□□□□ 0.54
PRPF8-202ENST00000571346 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
PRPF8-202ENST00000571346 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
PRPF8-202ENST00000571346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
PRPF8-202ENST00000571346 SMIM5Q71RC9 77 aa18.44■□□□□ 0.54
PRPF8-202ENST00000571346 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
PRPF8-202ENST00000571346 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
PRPF8-202ENST00000571346 SSFA2P28290 1259 aa18.42■□□□□ 0.54
PRPF8-202ENST00000571346 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
PRPF8-202ENST00000571346 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
PRPF8-202ENST00000571346 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
PRPF8-202ENST00000571346 MRC1P22897 1456 aa18.4■□□□□ 0.54
PRPF8-202ENST00000571346 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
PRPF8-202ENST00000571346 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
PRPF8-202ENST00000571346 GPR162Q16538 588 aa18.39■□□□□ 0.53
PRPF8-202ENST00000571346 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
PRPF8-202ENST00000571346 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
PRPF8-202ENST00000571346 TJP1Q07157 1748 aa18.39■□□□□ 0.53
PRPF8-202ENST00000571346 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
PRPF8-202ENST00000571346 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
PRPF8-202ENST00000571346 CHD4Q14839 1912 aa18.36■□□□□ 0.53
PRPF8-202ENST00000571346 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
PRPF8-202ENST00000571346 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
PRPF8-202ENST00000571346 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
PRPF8-202ENST00000571346 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
PRPF8-202ENST00000571346 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
PRPF8-202ENST00000571346 SLC52A2Q9HAB3 445 aa18.35■□□□□ 0.53
PRPF8-202ENST00000571346 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
PRPF8-202ENST00000571346 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
PRPF8-202ENST00000571346 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.53
PRPF8-202ENST00000571346 TRAPPC3LQ5T215 181 aa18.32■□□□□ 0.52
PRPF8-202ENST00000571346 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
PRPF8-202ENST00000571346 ADRA2BP18089 450 aa18.31■□□□□ 0.52
PRPF8-202ENST00000571346 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
PRPF8-202ENST00000571346 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
PRPF8-202ENST00000571346 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
PRPF8-202ENST00000571346 CD2APQ9Y5K6 639 aa18.31■□□□□ 0.52
PRPF8-202ENST00000571346 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
PRPF8-202ENST00000571346 MMP10P09238 476 aa18.3■□□□□ 0.52
PRPF8-202ENST00000571346 RFC4P35249 363 aa18.3■□□□□ 0.52
PRPF8-202ENST00000571346 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
PRPF8-202ENST00000571346 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
PRPF8-202ENST00000571346 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
PRPF8-202ENST00000571346 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
PRPF8-202ENST00000571346 WWC3Q9ULE0 1092 aa18.29■□□□□ 0.52
PRPF8-202ENST00000571346 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
PRPF8-202ENST00000571346 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
PRPF8-202ENST00000571346 YBX3P16989 372 aaKnown RBP eCLIP18.28■□□□□ 0.523e-7■□□□□ 9.4
PRPF8-202ENST00000571346 DNAJC10Q8IXB1 793 aa18.28■□□□□ 0.52
PRPF8-202ENST00000571346 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
PRPF8-202ENST00000571346 GNAT3A8MTJ3 354 aa18.27■□□□□ 0.52
PRPF8-202ENST00000571346 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
PRPF8-202ENST00000571346 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
PRPF8-202ENST00000571346 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
PRPF8-202ENST00000571346 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
PRPF8-202ENST00000571346 TEFQ10587 303 aa18.26■□□□□ 0.51
PRPF8-202ENST00000571346 GYS1P13807 737 aa18.25■□□□□ 0.51
PRPF8-202ENST00000571346 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
PRPF8-202ENST00000571346 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
PRPF8-202ENST00000571346 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
PRPF8-202ENST00000571346 C10orf71Q711Q0 1435 aa18.24■□□□□ 0.51
PRPF8-202ENST00000571346 KIF13BQ9NQT8 1826 aa18.24■□□□□ 0.51
PRPF8-202ENST00000571346 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
PRPF8-202ENST00000571346 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
PRPF8-202ENST00000571346 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
PRPF8-202ENST00000571346 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
PRPF8-202ENST00000571346 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
PRPF8-202ENST00000571346 KIAA1551Q9HCM1 1747 aa18.23■□□□□ 0.51
PRPF8-202ENST00000571346 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
PRPF8-202ENST00000571346 COL15A1P39059 1388 aa18.22■□□□□ 0.51
PRPF8-202ENST00000571346 INTS5Q6P9B9 1019 aaKnown RBP18.22■□□□□ 0.51
PRPF8-202ENST00000571346 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
PRPF8-202ENST00000571346 PARP3Q9Y6F1 533 aa18.22■□□□□ 0.51
PRPF8-202ENST00000571346 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
PRPF8-202ENST00000571346 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
PRPF8-202ENST00000571346 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
PRPF8-202ENST00000571346 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
PRPF8-202ENST00000571346 FKBP8Q14318 412 aa18.2■□□□□ 0.5
PRPF8-202ENST00000571346 ZPR1O75312 459 aa18.19■□□□□ 0.5
PRPF8-202ENST00000571346 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
PRPF8-202ENST00000571346 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
PRPF8-202ENST00000571346 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
PRPF8-202ENST00000571346 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
PRPF8-202ENST00000571346 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
PRPF8-202ENST00000571346 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms