RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 ARXQ96QS3 562 aa18.34■□□□□ 0.53
ATP2A3-209ENST00000571245 TUBGCP6Q96RT7 1819 aa18.33■□□□□ 0.53
ATP2A3-209ENST00000571245 ATG3Q9NT62 314 aa18.33■□□□□ 0.52
ATP2A3-209ENST00000571245 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
ATP2A3-209ENST00000571245 RBM42Q9BTD8 480 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-209ENST00000571245 C5P01031 1676 aa18.31■□□□□ 0.52
ATP2A3-209ENST00000571245 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
ATP2A3-209ENST00000571245 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
ATP2A3-209ENST00000571245 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
ATP2A3-209ENST00000571245 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-209ENST00000571245 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
ATP2A3-209ENST00000571245 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
ATP2A3-209ENST00000571245 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-209ENST00000571245 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
ATP2A3-209ENST00000571245 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
ATP2A3-209ENST00000571245 PHF14O94880 888 aa18.28■□□□□ 0.52
ATP2A3-209ENST00000571245 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
ATP2A3-209ENST00000571245 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
ATP2A3-209ENST00000571245 SYT17Q9BSW7 474 aa18.28■□□□□ 0.52
ATP2A3-209ENST00000571245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
ATP2A3-209ENST00000571245 GNPATO15228 680 aa18.26■□□□□ 0.51
ATP2A3-209ENST00000571245 PTCD1O75127 700 aaKnown RBP18.26■□□□□ 0.51
ATP2A3-209ENST00000571245 ITPK1Q13572 414 aa18.26■□□□□ 0.51
ATP2A3-209ENST00000571245 SSFA2P28290 1259 aa18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 LGR6Q9HBX8 967 aa18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 VIRMAQ69YN4 1812 aaKnown RBP18.25■□□□□ 0.51
ATP2A3-209ENST00000571245 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-209ENST00000571245 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
ATP2A3-209ENST00000571245 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
ATP2A3-209ENST00000571245 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
ATP2A3-209ENST00000571245 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
ATP2A3-209ENST00000571245 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
ATP2A3-209ENST00000571245 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
ATP2A3-209ENST00000571245 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
ATP2A3-209ENST00000571245 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
ATP2A3-209ENST00000571245 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
ATP2A3-209ENST00000571245 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
ATP2A3-209ENST00000571245 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
ATP2A3-209ENST00000571245 TEFQ10587 303 aa18.2■□□□□ 0.5
ATP2A3-209ENST00000571245 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
ATP2A3-209ENST00000571245 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
ATP2A3-209ENST00000571245 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 FCHSD2O94868 740 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 NEFMP07197 916 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
ATP2A3-209ENST00000571245 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
ATP2A3-209ENST00000571245 ADRA2BP18089 450 aa18.18■□□□□ 0.5
ATP2A3-209ENST00000571245 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
ATP2A3-209ENST00000571245 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
ATP2A3-209ENST00000571245 RFC4P35249 363 aa18.17■□□□□ 0.5
ATP2A3-209ENST00000571245 SLC39A6Q13433 755 aa18.17■□□□□ 0.5
ATP2A3-209ENST00000571245 GPR162Q16538 588 aa18.17■□□□□ 0.5
ATP2A3-209ENST00000571245 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
ATP2A3-209ENST00000571245 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
ATP2A3-209ENST00000571245 MIER1Q8N108 512 aa18.16■□□□□ 0.5
ATP2A3-209ENST00000571245 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
ATP2A3-209ENST00000571245 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
ATP2A3-209ENST00000571245 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 YY1P25490 414 aa18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 CCDC184Q52MB2 194 aa18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 IL17REQ8NFR9 667 aa18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-209ENST00000571245 CD2APQ9Y5K6 639 aa18.14■□□□□ 0.49
ATP2A3-209ENST00000571245 DNAJC10Q8IXB1 793 aa18.13■□□□□ 0.49
ATP2A3-209ENST00000571245 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-209ENST00000571245 MRC1P22897 1456 aa18.13■□□□□ 0.49
ATP2A3-209ENST00000571245 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
ATP2A3-209ENST00000571245 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
ATP2A3-209ENST00000571245 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
ATP2A3-209ENST00000571245 CCDC87Q9NVE4 849 aa18.12■□□□□ 0.49
ATP2A3-209ENST00000571245 MMP10P09238 476 aa18.11■□□□□ 0.49
ATP2A3-209ENST00000571245 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATP2A3-209ENST00000571245 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
ATP2A3-209ENST00000571245 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
ATP2A3-209ENST00000571245 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
ATP2A3-209ENST00000571245 STARD3NLO95772 234 aa18.1■□□□□ 0.49
ATP2A3-209ENST00000571245 INTS5Q6P9B9 1019 aaKnown RBP18.1■□□□□ 0.49
ATP2A3-209ENST00000571245 ZPR1O75312 459 aa18.09■□□□□ 0.49
ATP2A3-209ENST00000571245 CYP19A1P11511 503 aaPredicted RBP18.09■□□□□ 0.49
ATP2A3-209ENST00000571245 TEX13AQ9BXU3 409 aaPredicted RBP18.09■□□□□ 0.49
ATP2A3-209ENST00000571245 CHD4Q14839 1912 aa18.09■□□□□ 0.49
ATP2A3-209ENST00000571245 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
ATP2A3-209ENST00000571245 HTATSF1O43719 755 aaKnown RBP18.08■□□□□ 0.48
ATP2A3-209ENST00000571245 MCM10Q7L590 875 aa18.08■□□□□ 0.48
ATP2A3-209ENST00000571245 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
ATP2A3-209ENST00000571245 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.48
ATP2A3-209ENST00000571245 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
ATP2A3-209ENST00000571245 GYS1P13807 737 aa18.07■□□□□ 0.48
ATP2A3-209ENST00000571245 ZNF496Q96IT1 587 aaPredicted RBP18.07■□□□□ 0.48
ATP2A3-209ENST00000571245 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
ATP2A3-209ENST00000571245 GRIN3BO60391 1043 aa18.06■□□□□ 0.48
ATP2A3-209ENST00000571245 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
ATP2A3-209ENST00000571245 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms