RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 VAMP4O75379 141 aa22.15■■□□□ 1.14
RPAIN-208ENST00000571043 RLBP1P12271 317 aa22.15■■□□□ 1.14
RPAIN-208ENST00000571043 DZIP1LQ8IYY4 767 aaKnown RBP22.15■■□□□ 1.14
RPAIN-208ENST00000571043 EXOC5O00471 708 aa22.14■■□□□ 1.13
RPAIN-208ENST00000571043 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
RPAIN-208ENST00000571043 RBM6P78332 1123 aaKnown RBP22.13■■□□□ 1.13
RPAIN-208ENST00000571043 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
RPAIN-208ENST00000571043 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
RPAIN-208ENST00000571043 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
RPAIN-208ENST00000571043 MVPQ14764 893 aaKnown RBP22.12■■□□□ 1.13
RPAIN-208ENST00000571043 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
RPAIN-208ENST00000571043 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
RPAIN-208ENST00000571043 CHL1O00533 1208 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 CYP27B1O15528 508 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 DDB1Q16531 1140 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
RPAIN-208ENST00000571043 TNNQ9UQP3 1299 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 TRIM27P14373 513 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
RPAIN-208ENST00000571043 RTF1Q92541 710 aaKnown RBP22.11■■□□□ 1.13
RPAIN-208ENST00000571043 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
RPAIN-208ENST00000571043 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
RPAIN-208ENST00000571043 PHKG2P15735 406 aa22.1■■□□□ 1.13
RPAIN-208ENST00000571043 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
RPAIN-208ENST00000571043 THSD7AQ9UPZ6 1657 aa22.1■■□□□ 1.13
RPAIN-208ENST00000571043 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
RPAIN-208ENST00000571043 POTEAQ6S8J7 498 aa22.09■■□□□ 1.13
RPAIN-208ENST00000571043 MCM10Q7L590 875 aa22.09■■□□□ 1.13
RPAIN-208ENST00000571043 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
RPAIN-208ENST00000571043 RXRBP28702 533 aa22.08■■□□□ 1.13
RPAIN-208ENST00000571043 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.13
RPAIN-208ENST00000571043 TSPYL6Q8N831 410 aa22.08■■□□□ 1.13
RPAIN-208ENST00000571043 MAP3K5Q99683 1374 aa22.08■■□□□ 1.13
RPAIN-208ENST00000571043 TNS2Q63HR2 1409 aa22.08■■□□□ 1.12
RPAIN-208ENST00000571043 NKX1-1Q15270 411 aaPredicted RBP22.07■■□□□ 1.12
RPAIN-208ENST00000571043 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
RPAIN-208ENST00000571043 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
RPAIN-208ENST00000571043 VIRMAQ69YN4 1812 aaKnown RBP22.07■■□□□ 1.12
RPAIN-208ENST00000571043 KAT6BQ8WYB5 2073 aa22.06■■□□□ 1.12
RPAIN-208ENST00000571043 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
RPAIN-208ENST00000571043 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
RPAIN-208ENST00000571043 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
RPAIN-208ENST00000571043 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
RPAIN-208ENST00000571043 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
RPAIN-208ENST00000571043 A0A0G2JS52 829 aa22.04■■□□□ 1.12
RPAIN-208ENST00000571043 MYT1Q01538 1121 aa22.04■■□□□ 1.12
RPAIN-208ENST00000571043 MPRIPQ6WCQ1 1025 aa22.04■■□□□ 1.12
RPAIN-208ENST00000571043 MARCH10Q8NA82 808 aaPredicted RBP22.04■■□□□ 1.12
RPAIN-208ENST00000571043 LGR6Q9HBX8 967 aa22.04■■□□□ 1.12
RPAIN-208ENST00000571043 IGHDP01880 384 aa22.03■■□□□ 1.12
RPAIN-208ENST00000571043 DCAF5Q96JK2 942 aa22.03■■□□□ 1.12
RPAIN-208ENST00000571043 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
RPAIN-208ENST00000571043 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
RPAIN-208ENST00000571043 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
RPAIN-208ENST00000571043 CEMIPQ8WUJ3 1361 aa22.02■■□□□ 1.12
RPAIN-208ENST00000571043 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
RPAIN-208ENST00000571043 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
RPAIN-208ENST00000571043 TMEM57Q8N5G2 664 aa22.01■■□□□ 1.11
RPAIN-208ENST00000571043 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
RPAIN-208ENST00000571043 BRWD3Q6RI45 1802 aa22■■□□□ 1.11
RPAIN-208ENST00000571043 KDM6AO15550 1401 aaPredicted RBP22■■□□□ 1.11
RPAIN-208ENST00000571043 ITPRIPQ8IWB1 547 aa22■■□□□ 1.11
RPAIN-208ENST00000571043 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
RPAIN-208ENST00000571043 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
RPAIN-208ENST00000571043 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
RPAIN-208ENST00000571043 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
RPAIN-208ENST00000571043 ERVV-2B6SEH9 535 aa21.97■■□□□ 1.11
RPAIN-208ENST00000571043 ABCC4O15439 1325 aa21.96■■□□□ 1.11
RPAIN-208ENST00000571043 ZBTB40Q9NUA8 1239 aa21.96■■□□□ 1.11
RPAIN-208ENST00000571043 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.1
RPAIN-208ENST00000571043 PDE4AP27815 886 aa21.95■■□□□ 1.1
RPAIN-208ENST00000571043 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
RPAIN-208ENST00000571043 KRT27Q7Z3Y8 459 aa21.95■■□□□ 1.1
RPAIN-208ENST00000571043 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
RPAIN-208ENST00000571043 TEFQ10587 303 aa21.94■■□□□ 1.1
RPAIN-208ENST00000571043 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
RPAIN-208ENST00000571043 BCL9O00512 1426 aa21.93■■□□□ 1.1
RPAIN-208ENST00000571043 RGS12O14924 1447 aa21.93■■□□□ 1.1
RPAIN-208ENST00000571043 ITGB4P16144 1822 aa21.93■■□□□ 1.1
RPAIN-208ENST00000571043 SIPA1L3O60292 1781 aaPredicted RBP21.93■■□□□ 1.1
RPAIN-208ENST00000571043 HDAC1Q13547 482 aaPredicted RBP21.93■■□□□ 1.1
RPAIN-208ENST00000571043 NFATC2IPQ8NCF5 419 aa21.93■■□□□ 1.1
RPAIN-208ENST00000571043 TOGARAM1Q9Y4F4 1720 aa21.93■■□□□ 1.1
RPAIN-208ENST00000571043 CABP4P57796 275 aa21.92■■□□□ 1.1
RPAIN-208ENST00000571043 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
RPAIN-208ENST00000571043 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
RPAIN-208ENST00000571043 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
RPAIN-208ENST00000571043 MRC1P22897 1456 aa21.91■■□□□ 1.1
RPAIN-208ENST00000571043 FAM182BQ5T319 152 aa21.9■■□□□ 1.1
RPAIN-208ENST00000571043 PTPRCP08575 1304 aa21.9■■□□□ 1.1
RPAIN-208ENST00000571043 EP400Q96L91 3159 aa21.9■■□□□ 1.1
RPAIN-208ENST00000571043 SBF2Q86WG5 1849 aa21.89■■□□□ 1.1
RPAIN-208ENST00000571043 ZBTB7BO15156 539 aaPredicted RBP21.89■■□□□ 1.09
RPAIN-208ENST00000571043 PRIM1P49642 420 aaKnown RBP21.89■■□□□ 1.09
RPAIN-208ENST00000571043 DOT1LQ8TEK3 1739 aa21.88■■□□□ 1.09
RPAIN-208ENST00000571043 FAM196AQ6ZSG2 479 aa21.88■■□□□ 1.09
RPAIN-208ENST00000571043 TMOD3Q9NYL9 352 aa21.88■■□□□ 1.09
RPAIN-208ENST00000571043 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 849.9 ms