RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 MMP10P09238 476 aa26.2■■□□□ 1.78
SCARF1-204ENST00000570902 HSPA6P17066 643 aa26.2■■□□□ 1.78
SCARF1-204ENST00000570902 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
SCARF1-204ENST00000570902 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.78
SCARF1-204ENST00000570902 IFFO2Q5TF58 517 aa26.19■■□□□ 1.78
SCARF1-204ENST00000570902 RTCBQ9Y3I0 505 aaKnown RBP26.19■■□□□ 1.78
SCARF1-204ENST00000570902 ERVV-2B6SEH9 535 aa26.18■■□□□ 1.78
SCARF1-204ENST00000570902 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
SCARF1-204ENST00000570902 TRAPPC3LQ5T215 181 aa26.18■■□□□ 1.78
SCARF1-204ENST00000570902 KDRP35968 1356 aa26.18■■□□□ 1.78
SCARF1-204ENST00000570902 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
SCARF1-204ENST00000570902 NLGN1Q8N2Q7 840 aa26.17■■□□□ 1.78
SCARF1-204ENST00000570902 ZNF831Q5JPB2 1677 aa26.16■■□□□ 1.78
SCARF1-204ENST00000570902 ADRA2BP18089 450 aa26.16■■□□□ 1.78
SCARF1-204ENST00000570902 TNNT2P45379 298 aaPredicted RBP26.16■■□□□ 1.78
SCARF1-204ENST00000570902 TGFB2P61812 414 aa26.16■■□□□ 1.78
SCARF1-204ENST00000570902 DCAF5Q96JK2 942 aa26.15■■□□□ 1.78
SCARF1-204ENST00000570902 PXDNLA1KZ92 1463 aa26.15■■□□□ 1.78
SCARF1-204ENST00000570902 KIF13BQ9NQT8 1826 aa26.14■■□□□ 1.78
SCARF1-204ENST00000570902 RC3H1Q5TC82 1133 aaKnown RBP26.14■■□□□ 1.78
SCARF1-204ENST00000570902 POLR3GLQ9BT43 218 aa26.14■■□□□ 1.78
SCARF1-204ENST00000570902 RBM42Q9BTD8 480 aaKnown RBP26.14■■□□□ 1.78
SCARF1-204ENST00000570902 PLEKHO1Q53GL0 409 aaPredicted RBP26.12■■□□□ 1.77
SCARF1-204ENST00000570902 CNTNAP4Q9C0A0 1308 aa26.12■■□□□ 1.77
SCARF1-204ENST00000570902 SLC4A9Q96Q91 983 aa26.11■■□□□ 1.77
SCARF1-204ENST00000570902 CCDC87Q9NVE4 849 aa26.11■■□□□ 1.77
SCARF1-204ENST00000570902 C10orf71Q711Q0 1435 aa26.11■■□□□ 1.77
SCARF1-204ENST00000570902 KIF3CO14782 793 aa26.1■■□□□ 1.77
SCARF1-204ENST00000570902 RFC4P35249 363 aa26.1■■□□□ 1.77
SCARF1-204ENST00000570902 AMOTQ4VCS5 1084 aa26.1■■□□□ 1.77
SCARF1-204ENST00000570902 ARHGEF1Q92888 912 aaKnown RBP26.1■■□□□ 1.77
SCARF1-204ENST00000570902 KIAA1551Q9HCM1 1747 aa26.09■■□□□ 1.77
SCARF1-204ENST00000570902 BCS1LQ9Y276 419 aa26.09■■□□□ 1.77
SCARF1-204ENST00000570902 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.77
SCARF1-204ENST00000570902 A0A0G2JLW4 131 aa26.08■■□□□ 1.77
SCARF1-204ENST00000570902 RPS6KA4O75676 772 aa26.08■■□□□ 1.77
SCARF1-204ENST00000570902 CABP4P57796 275 aa26.08■■□□□ 1.77
SCARF1-204ENST00000570902 ZNF530Q6P9A1 599 aaPredicted RBP26.08■■□□□ 1.77
SCARF1-204ENST00000570902 PARP3Q9Y6F1 533 aa26.08■■□□□ 1.77
SCARF1-204ENST00000570902 N4BP2Q86UW6 1770 aaPredicted RBP26.07■■□□□ 1.76
SCARF1-204ENST00000570902 GYS1P13807 737 aa26.07■■□□□ 1.76
SCARF1-204ENST00000570902 C4AP0C0L4 1744 aa26.07■■□□□ 1.76
SCARF1-204ENST00000570902 KDM6AO15550 1401 aaPredicted RBP26.06■■□□□ 1.76
SCARF1-204ENST00000570902 ARHGAP27Q6ZUM4 889 aa26.05■■□□□ 1.76
SCARF1-204ENST00000570902 DPEP1P16444 411 aa26.04■■□□□ 1.76
SCARF1-204ENST00000570902 MTHFSP49914 203 aa26.04■■□□□ 1.76
SCARF1-204ENST00000570902 C1orf141Q5JVX7 400 aa26.04■■□□□ 1.76
SCARF1-204ENST00000570902 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
SCARF1-204ENST00000570902 FCHSD2O94868 740 aa26.03■■□□□ 1.76
SCARF1-204ENST00000570902 PANK3Q9H999 370 aa26.03■■□□□ 1.76
SCARF1-204ENST00000570902 TOMM70O94826 608 aa26.01■■□□□ 1.75
SCARF1-204ENST00000570902 APLP1P51693 650 aa26.01■■□□□ 1.75
SCARF1-204ENST00000570902 PTCD1O75127 700 aaKnown RBP26■■□□□ 1.75
SCARF1-204ENST00000570902 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
SCARF1-204ENST00000570902 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
SCARF1-204ENST00000570902 CRKLP46109 303 aaKnown RBP25.98■■□□□ 1.75
SCARF1-204ENST00000570902 MORC1Q86VD1 984 aa25.98■■□□□ 1.75
SCARF1-204ENST00000570902 AEBP1Q8IUX7 1158 aa25.98■■□□□ 1.75
SCARF1-204ENST00000570902 NFATC2IPQ8NCF5 419 aa25.98■■□□□ 1.75
SCARF1-204ENST00000570902 MYH14Q7Z406 1995 aaKnown RBP25.98■■□□□ 1.75
SCARF1-204ENST00000570902 PIM2Q9P1W9 311 aa25.97■■□□□ 1.75
SCARF1-204ENST00000570902 USP42Q9H9J4 1324 aaKnown RBP25.96■■□□□ 1.75
SCARF1-204ENST00000570902 SULT6B1Q6IMI4 303 aa25.96■■□□□ 1.75
SCARF1-204ENST00000570902 KCNA3P22001 575 aa25.95■■□□□ 1.74
SCARF1-204ENST00000570902 ARFGEF1Q9Y6D6 1849 aa25.94■■□□□ 1.74
SCARF1-204ENST00000570902 FKBP8Q14318 412 aa25.94■■□□□ 1.74
SCARF1-204ENST00000570902 DALRD3Q5D0E6 543 aaKnown RBP25.94■■□□□ 1.74
SCARF1-204ENST00000570902 HSPA5P11021 654 aaKnown RBP25.93■■□□□ 1.74
SCARF1-204ENST00000570902 C9orf131Q5VYM1 1079 aa25.93■■□□□ 1.74
SCARF1-204ENST00000570902 NMRK2Q9NPI5 230 aa25.93■■□□□ 1.74
SCARF1-204ENST00000570902 SRP68Q9UHB9 627 aaKnown RBP25.93■■□□□ 1.74
SCARF1-204ENST00000570902 TJP1Q07157 1748 aa25.92■■□□□ 1.74
SCARF1-204ENST00000570902 DDR1Q08345 913 aa25.91■■□□□ 1.74
SCARF1-204ENST00000570902 IL13P35225 146 aa25.9■■□□□ 1.74
SCARF1-204ENST00000570902 AKAP4Q5JQC9 854 aa25.9■■□□□ 1.74
SCARF1-204ENST00000570902 C16orf71Q8IYS4 520 aaPredicted RBP25.9■■□□□ 1.74
SCARF1-204ENST00000570902 RBM46Q8TBY0 533 aaKnown RBP25.9■■□□□ 1.74
SCARF1-204ENST00000570902 KNSTRNQ9Y448 316 aa25.9■■□□□ 1.74
SCARF1-204ENST00000570902 INTS5Q6P9B9 1019 aaKnown RBP25.89■■□□□ 1.74
SCARF1-204ENST00000570902 SCN11AQ9UI33 1791 aa25.89■■□□□ 1.73
SCARF1-204ENST00000570902 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
SCARF1-204ENST00000570902 ZPR1O75312 459 aa25.88■■□□□ 1.73
SCARF1-204ENST00000570902 PCGF6Q9BYE7 350 aa25.88■■□□□ 1.73
SCARF1-204ENST00000570902 DNAJC5GQ8N7S2 189 aa25.87■■□□□ 1.73
SCARF1-204ENST00000570902 POLRMTO00411 1230 aaKnown RBP25.86■■□□□ 1.73
SCARF1-204ENST00000570902 TM4SF1P30408 202 aa25.86■■□□□ 1.73
SCARF1-204ENST00000570902 SLC52A2Q9HAB3 445 aa25.86■■□□□ 1.73
SCARF1-204ENST00000570902 RNF181Q9P0P0 153 aa25.86■■□□□ 1.73
SCARF1-204ENST00000570902 CHRNA5P30532 468 aa25.85■■□□□ 1.73
SCARF1-204ENST00000570902 DNAJC10Q8IXB1 793 aa25.85■■□□□ 1.73
SCARF1-204ENST00000570902 ADAMTS7Q9UKP4 1686 aa25.84■■□□□ 1.73
SCARF1-204ENST00000570902 FSTL1Q12841 308 aa25.84■■□□□ 1.73
SCARF1-204ENST00000570902 USPL1Q5W0Q7 1092 aa25.84■■□□□ 1.73
SCARF1-204ENST00000570902 SOS1Q07889 1333 aaPredicted RBP25.84■■□□□ 1.73
SCARF1-204ENST00000570902 KCPQ6ZWJ8 1503 aa25.83■■□□□ 1.72
SCARF1-204ENST00000570902 MRC1P22897 1456 aa25.82■■□□□ 1.72
SCARF1-204ENST00000570902 WDR90Q96KV7 1748 aa25.81■■□□□ 1.72
SCARF1-204ENST00000570902 CYP19A1P11511 503 aaPredicted RBP25.81■■□□□ 1.72
SCARF1-204ENST00000570902 LGR6Q9HBX8 967 aa25.81■■□□□ 1.72
SCARF1-204ENST00000570902 NARFQ9UHQ1 456 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms