RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
USP43-203ENST00000570827 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
USP43-203ENST00000570827 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
USP43-203ENST00000570827 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 LRRFIP2Q9Y608 721 aaKnown RBP11.93□□□□□ -0.5
USP43-203ENST00000570827 POGZQ7Z3K3 1410 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
USP43-203ENST00000570827 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
USP43-203ENST00000570827 TET3O43151 1660 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 NECAB1Q8N987 351 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
USP43-203ENST00000570827 GOLGA6L19H0YKK7 550 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 BECN2A8MW95 431 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 CEP152O94986 1710 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 KIAA1210Q9ULL0 1709 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
USP43-203ENST00000570827 H3BQV1 296 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP43-203ENST00000570827 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.92□□□□□ -0.5
USP43-203ENST00000570827 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
USP43-203ENST00000570827 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
USP43-203ENST00000570827 KIDINS220Q9ULH0 1771 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 HS1BP3Q53T59 392 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 LARP1BQ659C4 914 aaKnown RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 ZDHHC9Q9Y397 364 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 GNAI3P08754 354 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
USP43-203ENST00000570827 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
USP43-203ENST00000570827 CCDC192P0DO97 292 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 MCM5P33992 734 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 DDIT3P35638 169 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 MSH6P52701 1360 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 ARAP3Q8WWN8 1544 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 ERICH4A6NGS2 130 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 STX6O43752 255 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 IFIT2P09913 472 aaKnown RBP11.9□□□□□ -0.5
USP43-203ENST00000570827 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 PPRC1Q5VV67 1664 aaKnown RBP11.9□□□□□ -0.5
USP43-203ENST00000570827 MYOM2P54296 1465 aa11.9□□□□□ -0.5
USP43-203ENST00000570827 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.51
USP43-203ENST00000570827 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.51
USP43-203ENST00000570827 EID1Q9Y6B2 187 aa11.9□□□□□ -0.51
USP43-203ENST00000570827 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 WASLO00401 505 aaPredicted RBP11.89□□□□□ -0.51
USP43-203ENST00000570827 CCT4P50991 539 aaKnown RBP11.89□□□□□ -0.51
USP43-203ENST00000570827 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 CGNQ9P2M7 1197 aaKnown RBP11.89□□□□□ -0.51
USP43-203ENST00000570827 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 CCDC94Q9BW85 323 aaPredicted RBP11.89□□□□□ -0.51
USP43-203ENST00000570827 NSD2O96028 1365 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 ZMYM3Q14202 1370 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
USP43-203ENST00000570827 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 ZBTB9Q96C00 473 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 SIL1Q9H173 461 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
USP43-203ENST00000570827 KDM4AO75164 1064 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 GJB2P29033 226 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 PDRG1Q9NUG6 133 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 PTGS1P23219 599 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 MYOM1P52179 1685 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 KIF1BO60333 1816 aa11.88□□□□□ -0.51
USP43-203ENST00000570827 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 CHMLP26374 656 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 CCDC186Q7Z3E2 898 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 MAP3K4Q9Y6R4 1608 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 ESCO1Q5FWF5 840 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 BRD1O95696 1058 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 CCDC112Q8NEF3 446 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 MROH1Q8NDA8 1641 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 ACEP12821 1306 aa11.87□□□□□ -0.51
USP43-203ENST00000570827 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 SYT1P21579 422 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 AK2P54819 239 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms