RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
NDE1-203ENST00000570727 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
NDE1-203ENST00000570727 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
NDE1-203ENST00000570727 SLC4A9Q96Q91 983 aa20.25■□□□□ 0.83
NDE1-203ENST00000570727 AEBP1Q8IUX7 1158 aa20.24■□□□□ 0.83
NDE1-203ENST00000570727 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
NDE1-203ENST00000570727 KNSTRNQ9Y448 316 aa20.23■□□□□ 0.83
NDE1-203ENST00000570727 GNPATO15228 680 aa20.22■□□□□ 0.83
NDE1-203ENST00000570727 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
NDE1-203ENST00000570727 AMOTQ4VCS5 1084 aa20.22■□□□□ 0.83
NDE1-203ENST00000570727 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
NDE1-203ENST00000570727 KDRP35968 1356 aa20.21■□□□□ 0.83
NDE1-203ENST00000570727 KDM6AO15550 1401 aaPredicted RBP20.21■□□□□ 0.83
NDE1-203ENST00000570727 IL13P35225 146 aa20.21■□□□□ 0.83
NDE1-203ENST00000570727 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
NDE1-203ENST00000570727 SULT6B1Q6IMI4 303 aa20.2■□□□□ 0.82
NDE1-203ENST00000570727 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
NDE1-203ENST00000570727 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
NDE1-203ENST00000570727 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
NDE1-203ENST00000570727 MTHFSP49914 203 aa20.18■□□□□ 0.82
NDE1-203ENST00000570727 CABP4P57796 275 aa20.18■□□□□ 0.82
NDE1-203ENST00000570727 RC3H1Q5TC82 1133 aaKnown RBP20.18■□□□□ 0.82
NDE1-203ENST00000570727 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
NDE1-203ENST00000570727 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
NDE1-203ENST00000570727 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
NDE1-203ENST00000570727 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
NDE1-203ENST00000570727 PER1O15534 1290 aaPredicted RBP20.16■□□□□ 0.82
NDE1-203ENST00000570727 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
NDE1-203ENST00000570727 NFATC2IPQ8NCF5 419 aa20.16■□□□□ 0.82
NDE1-203ENST00000570727 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
NDE1-203ENST00000570727 MMP10P09238 476 aa20.15■□□□□ 0.82
NDE1-203ENST00000570727 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
NDE1-203ENST00000570727 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
NDE1-203ENST00000570727 RPS6KA4O75676 772 aa20.14■□□□□ 0.81
NDE1-203ENST00000570727 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
NDE1-203ENST00000570727 WWC3Q9ULE0 1092 aa20.13■□□□□ 0.81
NDE1-203ENST00000570727 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
NDE1-203ENST00000570727 SCN11AQ9UI33 1791 aa20.12■□□□□ 0.81
NDE1-203ENST00000570727 GIGYF1O75420 1035 aaPredicted RBP20.11■□□□□ 0.81
NDE1-203ENST00000570727 GYS1P13807 737 aa20.11■□□□□ 0.81
NDE1-203ENST00000570727 ADRA2BP18089 450 aa20.11■□□□□ 0.81
NDE1-203ENST00000570727 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
NDE1-203ENST00000570727 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
NDE1-203ENST00000570727 LGR6Q9HBX8 967 aa20.1■□□□□ 0.81
NDE1-203ENST00000570727 RFC4P35249 363 aa20.09■□□□□ 0.81
NDE1-203ENST00000570727 KIAA1551Q9HCM1 1747 aa20.08■□□□□ 0.81
NDE1-203ENST00000570727 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.81
NDE1-203ENST00000570727 HMOX1P09601 288 aa20.08■□□□□ 0.81
NDE1-203ENST00000570727 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
NDE1-203ENST00000570727 ATP10DQ9P241 1426 aa20.08■□□□□ 0.8
NDE1-203ENST00000570727 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
NDE1-203ENST00000570727 SLC52A2Q9HAB3 445 aa20.07■□□□□ 0.8
NDE1-203ENST00000570727 N4BP2Q86UW6 1770 aaPredicted RBP20.07■□□□□ 0.8
NDE1-203ENST00000570727 CEP350Q5VT06 3117 aa20.07■□□□□ 0.8
NDE1-203ENST00000570727 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
NDE1-203ENST00000570727 ADCY9O60503 1353 aa20.07■□□□□ 0.8
NDE1-203ENST00000570727 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
NDE1-203ENST00000570727 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
NDE1-203ENST00000570727 CICQ96RK0 1608 aaPredicted RBP20.06■□□□□ 0.8
NDE1-203ENST00000570727 A0A0G2JLW4 131 aa20.06■□□□□ 0.8
NDE1-203ENST00000570727 TGFB2P61812 414 aa20.06■□□□□ 0.8
NDE1-203ENST00000570727 TJP1Q07157 1748 aa20.06■□□□□ 0.8
NDE1-203ENST00000570727 INTS5Q6P9B9 1019 aaKnown RBP20.06■□□□□ 0.8
NDE1-203ENST00000570727 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
NDE1-203ENST00000570727 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
NDE1-203ENST00000570727 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
NDE1-203ENST00000570727 SRP68Q9UHB9 627 aaKnown RBP20.04■□□□□ 0.8
NDE1-203ENST00000570727 C10orf71Q711Q0 1435 aa20.03■□□□□ 0.8
NDE1-203ENST00000570727 SLC39A6Q13433 755 aa20.03■□□□□ 0.8
NDE1-203ENST00000570727 DNAJC10Q8IXB1 793 aa20.03■□□□□ 0.8
NDE1-203ENST00000570727 PARP3Q9Y6F1 533 aa20.03■□□□□ 0.8
NDE1-203ENST00000570727 DPEP1P16444 411 aa20.02■□□□□ 0.8
NDE1-203ENST00000570727 FKBP8Q14318 412 aa20.02■□□□□ 0.8
NDE1-203ENST00000570727 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.8
NDE1-203ENST00000570727 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.79
NDE1-203ENST00000570727 ADAMTS7Q9UKP4 1686 aa20.01■□□□□ 0.79
NDE1-203ENST00000570727 KCNA3P22001 575 aa20.01■□□□□ 0.79
NDE1-203ENST00000570727 GPBP1L1Q9HC44 474 aaPredicted RBP20.01■□□□□ 0.79
NDE1-203ENST00000570727 MRC1P22897 1456 aa20■□□□□ 0.79
NDE1-203ENST00000570727 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
NDE1-203ENST00000570727 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
NDE1-203ENST00000570727 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
NDE1-203ENST00000570727 BCS1LQ9Y276 419 aa20■□□□□ 0.79
NDE1-203ENST00000570727 BRCA1P38398 1863 aaKnown RBP19.99■□□□□ 0.79
NDE1-203ENST00000570727 DDR1Q08345 913 aa19.99■□□□□ 0.79
NDE1-203ENST00000570727 TM4SF1P30408 202 aa19.98■□□□□ 0.79
NDE1-203ENST00000570727 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
NDE1-203ENST00000570727 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
NDE1-203ENST00000570727 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
NDE1-203ENST00000570727 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
NDE1-203ENST00000570727 FCHSD2O94868 740 aa19.96■□□□□ 0.79
NDE1-203ENST00000570727 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
NDE1-203ENST00000570727 POLRMTO00411 1230 aaKnown RBP19.95■□□□□ 0.78
NDE1-203ENST00000570727 ARHGAP27Q6ZUM4 889 aa19.95■□□□□ 0.78
NDE1-203ENST00000570727 VSIG10Q8N0Z9 540 aa19.95■□□□□ 0.78
NDE1-203ENST00000570727 IL17REQ8NFR9 667 aa19.95■□□□□ 0.78
NDE1-203ENST00000570727 U2SURPO15042 1029 aaKnown RBP19.94■□□□□ 0.78
NDE1-203ENST00000570727 ZPR1O75312 459 aa19.94■□□□□ 0.78
NDE1-203ENST00000570727 ZBTB1Q9Y2K1 713 aa19.94■□□□□ 0.78
NDE1-203ENST00000570727 PIM2Q9P1W9 311 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms