RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SSFA2P28290 1259 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 CHRNA5P30532 468 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 RASSF7Q02833 373 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 DDR1Q08345 913 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 GGNBP2Q9H3C7 697 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 POTECB2RU33 542 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 GYS1P13807 737 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 ATG3Q9NT62 314 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 SRP68Q9UHB9 627 aaKnown RBP10.33□□□□□ -0.76
SMG6-205ENST00000570659 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
SMG6-205ENST00000570659 FSTL1Q12841 308 aa10.32□□□□□ -0.76
SMG6-205ENST00000570659 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
SMG6-205ENST00000570659 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
SMG6-205ENST00000570659 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
SMG6-205ENST00000570659 TESK2Q96S53 571 aa10.32□□□□□ -0.76
SMG6-205ENST00000570659 RNF181Q9P0P0 153 aa10.32□□□□□ -0.76
SMG6-205ENST00000570659 RTL1A6NKG5 1358 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 TIAM2Q8IVF5 1701 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 FYB1O15117 783 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 POTEIP0CG38 1075 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 TATP17735 454 aaPredicted RBP10.31□□□□□ -0.76
SMG6-205ENST00000570659 TGFB2P61812 414 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
SMG6-205ENST00000570659 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 COG3Q96JB2 828 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 EMILIN1Q9Y6C2 1016 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 CCDC88AQ3V6T2 1871 aa10.31□□□□□ -0.76
SMG6-205ENST00000570659 KDM6AO15550 1401 aaPredicted RBP10.31□□□□□ -0.76
SMG6-205ENST00000570659 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
SMG6-205ENST00000570659 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
SMG6-205ENST00000570659 TJP1Q07157 1748 aa10.3□□□□□ -0.76
SMG6-205ENST00000570659 INSRP06213 1382 aa10.29□□□□□ -0.76
SMG6-205ENST00000570659 FOXN1O15353 648 aa10.29□□□□□ -0.76
SMG6-205ENST00000570659 FKBP8Q14318 412 aa10.29□□□□□ -0.76
SMG6-205ENST00000570659 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
SMG6-205ENST00000570659 KIF20BQ96Q89 1820 aa10.28□□□□□ -0.76
SMG6-205ENST00000570659 ANKRD26Q9UPS8 1709 aa10.28□□□□□ -0.76
SMG6-205ENST00000570659 TMF1P82094 1093 aa10.28□□□□□ -0.76
SMG6-205ENST00000570659 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
SMG6-205ENST00000570659 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
SMG6-205ENST00000570659 CGNL1Q0VF96 1302 aa10.28□□□□□ -0.76
SMG6-205ENST00000570659 PLEKHG2Q9H7P9 1386 aa10.27□□□□□ -0.76
SMG6-205ENST00000570659 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
SMG6-205ENST00000570659 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
SMG6-205ENST00000570659 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
SMG6-205ENST00000570659 CARMIL3Q8ND23 1372 aa10.26□□□□□ -0.77
SMG6-205ENST00000570659 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
SMG6-205ENST00000570659 PHKG2P15735 406 aa10.26□□□□□ -0.77
SMG6-205ENST00000570659 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
SMG6-205ENST00000570659 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
SMG6-205ENST00000570659 NFKBIEO00221 500 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
SMG6-205ENST00000570659 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 EYA1Q99502 592 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 CCDC87Q9NVE4 849 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 TMOD3Q9NYL9 352 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 KDM2BQ8NHM5 1336 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 FLT4P35916 1363 aa10.25□□□□□ -0.77
SMG6-205ENST00000570659 POLRMTO00411 1230 aaKnown RBP10.24□□□□□ -0.77
SMG6-205ENST00000570659 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
SMG6-205ENST00000570659 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
SMG6-205ENST00000570659 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
SMG6-205ENST00000570659 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
SMG6-205ENST00000570659 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
SMG6-205ENST00000570659 ANKRD31Q8N7Z5 1873 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 ST20-MTHFSA0A0A6YYL1 179 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 RPS6KA4O75676 772 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
SMG6-205ENST00000570659 PARP3Q9Y6F1 533 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 COL11A2P13942 1736 aaPredicted RBP10.23□□□□□ -0.77
SMG6-205ENST00000570659 CNTNAP4Q9C0A0 1308 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 USP42Q9H9J4 1324 aaKnown RBP10.23□□□□□ -0.77
SMG6-205ENST00000570659 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
SMG6-205ENST00000570659 SMG6Q86US8 1419 aaKnown RBP10.23□□□□□ -0.77
SMG6-205ENST00000570659 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
SMG6-205ENST00000570659 TM4SF1P30408 202 aa10.22□□□□□ -0.77
SMG6-205ENST00000570659 INTS5Q6P9B9 1019 aaKnown RBP10.22□□□□□ -0.77
SMG6-205ENST00000570659 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
SMG6-205ENST00000570659 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.77
SMG6-205ENST00000570659 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
SMG6-205ENST00000570659 PTCD1O75127 700 aaKnown RBP10.2□□□□□ -0.78
SMG6-205ENST00000570659 VEGFAP15692 232 aaPredicted RBP10.2□□□□□ -0.78
SMG6-205ENST00000570659 RFC4P35249 363 aa10.2□□□□□ -0.78
SMG6-205ENST00000570659 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
SMG6-205ENST00000570659 PUS7Q96PZ0 661 aaKnown RBP10.2□□□□□ -0.78
SMG6-205ENST00000570659 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
SMG6-205ENST00000570659 FER1L6Q2WGJ9 1857 aa10.19□□□□□ -0.78
SMG6-205ENST00000570659 CNTNAP1P78357 1384 aa10.19□□□□□ -0.78
SMG6-205ENST00000570659 PPM1GO15355 546 aaPredicted RBP10.19□□□□□ -0.78
SMG6-205ENST00000570659 VEGFBP49765 207 aa10.19□□□□□ -0.78
SMG6-205ENST00000570659 LBX1P52954 281 aa10.19□□□□□ -0.78
SMG6-205ENST00000570659 NFIXQ14938 502 aa10.19□□□□□ -0.78
SMG6-205ENST00000570659 DICER1Q9UPY3 1922 aaKnown RBP10.19□□□□□ -0.78
SMG6-205ENST00000570659 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 ADRA2BP18089 450 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms