RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
SPNS2-202ENST00000570641 SLC52A2Q9HAB3 445 aa23.42■■□□□ 1.34
SPNS2-202ENST00000570641 RCAN3Q9UKA8 241 aa23.42■■□□□ 1.34
SPNS2-202ENST00000570641 ERVV-2B6SEH9 535 aa23.41■■□□□ 1.34
SPNS2-202ENST00000570641 TOGARAM1Q9Y4F4 1720 aa23.41■■□□□ 1.34
SPNS2-202ENST00000570641 A0A0G2JS52 829 aa23.4■■□□□ 1.34
SPNS2-202ENST00000570641 MYT1Q01538 1121 aa23.4■■□□□ 1.34
SPNS2-202ENST00000570641 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
SPNS2-202ENST00000570641 CABP4P57796 275 aa23.39■■□□□ 1.33
SPNS2-202ENST00000570641 ITGB4P16144 1822 aa23.38■■□□□ 1.33
SPNS2-202ENST00000570641 ONECUT3O60422 494 aaPredicted RBP23.38■■□□□ 1.33
SPNS2-202ENST00000570641 MIS18AQ9NYP9 233 aa23.38■■□□□ 1.33
SPNS2-202ENST00000570641 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
SPNS2-202ENST00000570641 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
SPNS2-202ENST00000570641 NFATC2IPQ8NCF5 419 aa23.36■■□□□ 1.33
SPNS2-202ENST00000570641 MARCH10Q8NA82 808 aaPredicted RBP23.35■■□□□ 1.33
SPNS2-202ENST00000570641 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
SPNS2-202ENST00000570641 TWISTNBQ3B726 338 aaPredicted RBP23.34■■□□□ 1.33
SPNS2-202ENST00000570641 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
SPNS2-202ENST00000570641 SUPT16HQ9Y5B9 1047 aaKnown RBP23.34■■□□□ 1.33
SPNS2-202ENST00000570641 SOS1Q07889 1333 aaPredicted RBP23.33■■□□□ 1.33
SPNS2-202ENST00000570641 C8orf58Q8NAV2 365 aa23.33■■□□□ 1.33
SPNS2-202ENST00000570641 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
SPNS2-202ENST00000570641 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
SPNS2-202ENST00000570641 PAPPAQ13219 1627 aa23.32■■□□□ 1.32
SPNS2-202ENST00000570641 VAMP4O75379 141 aa23.31■■□□□ 1.32
SPNS2-202ENST00000570641 RARSP54136 660 aaKnown RBP23.3■■□□□ 1.32
SPNS2-202ENST00000570641 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
SPNS2-202ENST00000570641 TSPYL6Q8N831 410 aa23.3■■□□□ 1.32
SPNS2-202ENST00000570641 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
SPNS2-202ENST00000570641 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
SPNS2-202ENST00000570641 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
SPNS2-202ENST00000570641 TTC5Q8N0Z6 440 aa23.29■■□□□ 1.32
SPNS2-202ENST00000570641 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
SPNS2-202ENST00000570641 KCNQ3O43525 872 aa23.28■■□□□ 1.32
SPNS2-202ENST00000570641 KRT24Q2M2I5 525 aa23.28■■□□□ 1.32
SPNS2-202ENST00000570641 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
SPNS2-202ENST00000570641 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPNS2-202ENST00000570641 RNF123Q5XPI4 1314 aa23.28■■□□□ 1.32
SPNS2-202ENST00000570641 HOXB7P09629 217 aa23.27■■□□□ 1.32
SPNS2-202ENST00000570641 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
SPNS2-202ENST00000570641 CHMP4AQ9BY43 222 aa23.27■■□□□ 1.32
SPNS2-202ENST00000570641 BCL9O00512 1426 aa23.26■■□□□ 1.31
SPNS2-202ENST00000570641 RXRBP28702 533 aa23.26■■□□□ 1.31
SPNS2-202ENST00000570641 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.26■■□□□ 1.31
SPNS2-202ENST00000570641 CACNA1FO60840 1977 aa23.26■■□□□ 1.31
SPNS2-202ENST00000570641 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
SPNS2-202ENST00000570641 RRP1P56182 461 aaKnown RBP23.25■■□□□ 1.31
SPNS2-202ENST00000570641 PIGBQ92521 554 aa23.25■■□□□ 1.31
SPNS2-202ENST00000570641 HEG1Q9ULI3 1381 aa23.25■■□□□ 1.31
SPNS2-202ENST00000570641 BCAR3O75815 825 aa23.24■■□□□ 1.31
SPNS2-202ENST00000570641 NEFLP07196 543 aa23.24■■□□□ 1.31
SPNS2-202ENST00000570641 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
SPNS2-202ENST00000570641 FMNL2Q96PY5 1086 aa23.24■■□□□ 1.31
SPNS2-202ENST00000570641 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
SPNS2-202ENST00000570641 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
SPNS2-202ENST00000570641 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
SPNS2-202ENST00000570641 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
SPNS2-202ENST00000570641 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
SPNS2-202ENST00000570641 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
SPNS2-202ENST00000570641 C5P01031 1676 aa23.22■■□□□ 1.31
SPNS2-202ENST00000570641 GIGYF1O75420 1035 aaPredicted RBP23.21■■□□□ 1.31
SPNS2-202ENST00000570641 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
SPNS2-202ENST00000570641 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
SPNS2-202ENST00000570641 LAMB4A4D0S4 1761 aa23.21■■□□□ 1.31
SPNS2-202ENST00000570641 BRPF1P55201 1214 aaPredicted RBP23.2■■□□□ 1.3
SPNS2-202ENST00000570641 KRT27Q7Z3Y8 459 aa23.2■■□□□ 1.3
SPNS2-202ENST00000570641 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
SPNS2-202ENST00000570641 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
SPNS2-202ENST00000570641 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
SPNS2-202ENST00000570641 SNRPA1P09661 255 aaKnown RBP23.18■■□□□ 1.3
SPNS2-202ENST00000570641 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
SPNS2-202ENST00000570641 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
SPNS2-202ENST00000570641 MRPL50Q8N5N7 158 aaKnown RBP23.18■■□□□ 1.3
SPNS2-202ENST00000570641 STK31Q9BXU1 1019 aa23.18■■□□□ 1.3
SPNS2-202ENST00000570641 ASAP1Q9ULH1 1129 aa23.18■■□□□ 1.3
SPNS2-202ENST00000570641 BTAF1O14981 1849 aa23.16■■□□□ 1.3
SPNS2-202ENST00000570641 RGS12O14924 1447 aa23.16■■□□□ 1.3
SPNS2-202ENST00000570641 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
SPNS2-202ENST00000570641 IPO8O15397 1037 aaKnown RBP23.15■■□□□ 1.3
SPNS2-202ENST00000570641 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
SPNS2-202ENST00000570641 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
SPNS2-202ENST00000570641 FAM196AQ6ZSG2 479 aa23.15■■□□□ 1.3
SPNS2-202ENST00000570641 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
SPNS2-202ENST00000570641 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
SPNS2-202ENST00000570641 KCNQ2O43526 872 aa23.14■■□□□ 1.29
SPNS2-202ENST00000570641 PLIN1O60240 522 aa23.14■■□□□ 1.29
SPNS2-202ENST00000570641 PTCD1O75127 700 aaKnown RBP23.14■■□□□ 1.29
SPNS2-202ENST00000570641 ZKSCAN2Q63HK3 967 aa23.14■■□□□ 1.29
SPNS2-202ENST00000570641 VSIG10Q8N0Z9 540 aa23.14■■□□□ 1.29
SPNS2-202ENST00000570641 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
SPNS2-202ENST00000570641 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
SPNS2-202ENST00000570641 SLC4A2P04920 1241 aa23.12■■□□□ 1.29
SPNS2-202ENST00000570641 MS4A1P11836 297 aa23.12■■□□□ 1.29
SPNS2-202ENST00000570641 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
SPNS2-202ENST00000570641 NOB1Q9ULX3 412 aaKnown RBP23.12■■□□□ 1.29
SPNS2-202ENST00000570641 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
SPNS2-202ENST00000570641 ARHGAP45Q92619 1136 aa23.11■■□□□ 1.29
SPNS2-202ENST00000570641 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
SPNS2-202ENST00000570641 ZNF831Q5JPB2 1677 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms