RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
HERPUD1-219ENST00000570273 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
HERPUD1-219ENST00000570273 MIS18AQ9NYP9 233 aa19.99■□□□□ 0.79
HERPUD1-219ENST00000570273 BRWD3Q6RI45 1802 aa19.98■□□□□ 0.79
HERPUD1-219ENST00000570273 CABP4P57796 275 aa19.98■□□□□ 0.79
HERPUD1-219ENST00000570273 SEPT12Q8IYM1 358 aa19.98■□□□□ 0.79
HERPUD1-219ENST00000570273 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
HERPUD1-219ENST00000570273 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
HERPUD1-219ENST00000570273 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
HERPUD1-219ENST00000570273 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
HERPUD1-219ENST00000570273 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
HERPUD1-219ENST00000570273 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
HERPUD1-219ENST00000570273 EP400Q96L91 3159 aa19.97■□□□□ 0.79
HERPUD1-219ENST00000570273 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
HERPUD1-219ENST00000570273 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
HERPUD1-219ENST00000570273 KDM3BQ7LBC6 1761 aa19.94■□□□□ 0.78
HERPUD1-219ENST00000570273 TMOD3Q9NYL9 352 aa19.93■□□□□ 0.78
HERPUD1-219ENST00000570273 DOT1LQ8TEK3 1739 aa19.93■□□□□ 0.78
HERPUD1-219ENST00000570273 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
HERPUD1-219ENST00000570273 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
HERPUD1-219ENST00000570273 SOCS7O14512 581 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 KCNQ3O43525 872 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 SLC39A6Q13433 755 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 KRT24Q2M2I5 525 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 C8orf58Q8NAV2 365 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
HERPUD1-219ENST00000570273 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
HERPUD1-219ENST00000570273 TWISTNBQ3B726 338 aaPredicted RBP19.89■□□□□ 0.77
HERPUD1-219ENST00000570273 ZNF790Q6PG37 636 aa19.89■□□□□ 0.77
HERPUD1-219ENST00000570273 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
HERPUD1-219ENST00000570273 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
HERPUD1-219ENST00000570273 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
HERPUD1-219ENST00000570273 BCL9O00512 1426 aa19.88■□□□□ 0.77
HERPUD1-219ENST00000570273 PAPPAQ13219 1627 aa19.87■□□□□ 0.77
HERPUD1-219ENST00000570273 KRT27Q7Z3Y8 459 aa19.87■□□□□ 0.77
HERPUD1-219ENST00000570273 PIGBQ92521 554 aa19.87■□□□□ 0.77
HERPUD1-219ENST00000570273 ITGB4P16144 1822 aa19.87■□□□□ 0.77
HERPUD1-219ENST00000570273 FAM182BQ5T319 152 aa19.86■□□□□ 0.77
HERPUD1-219ENST00000570273 VAMP4O75379 141 aa19.85■□□□□ 0.77
HERPUD1-219ENST00000570273 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
HERPUD1-219ENST00000570273 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
HERPUD1-219ENST00000570273 SOS1Q07889 1333 aaPredicted RBP19.84■□□□□ 0.77
HERPUD1-219ENST00000570273 ZNF428Q96B54 188 aa19.84■□□□□ 0.77
HERPUD1-219ENST00000570273 FMNL2Q96PY5 1086 aa19.84■□□□□ 0.77
HERPUD1-219ENST00000570273 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
HERPUD1-219ENST00000570273 ZNF496Q96IT1 587 aaPredicted RBP19.83■□□□□ 0.76
HERPUD1-219ENST00000570273 BCL2L13Q9BXK5 485 aa19.83■□□□□ 0.76
HERPUD1-219ENST00000570273 SMC4Q9NTJ3 1288 aa19.83■□□□□ 0.76
HERPUD1-219ENST00000570273 NHSQ6T4R5 1651 aa19.83■□□□□ 0.76
HERPUD1-219ENST00000570273 HOXB7P09629 217 aa19.82■□□□□ 0.76
HERPUD1-219ENST00000570273 ATG3Q9NT62 314 aa19.82■□□□□ 0.76
HERPUD1-219ENST00000570273 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
HERPUD1-219ENST00000570273 HEG1Q9ULI3 1381 aa19.81■□□□□ 0.76
HERPUD1-219ENST00000570273 KCNQ2O43526 872 aa19.81■□□□□ 0.76
HERPUD1-219ENST00000570273 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
HERPUD1-219ENST00000570273 SSH1Q8WYL5 1049 aa19.81■□□□□ 0.76
HERPUD1-219ENST00000570273 UBR2Q8IWV8 1755 aa19.81■□□□□ 0.76
HERPUD1-219ENST00000570273 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
HERPUD1-219ENST00000570273 BCAR3O75815 825 aa19.8■□□□□ 0.76
HERPUD1-219ENST00000570273 TCERG1O14776 1098 aaKnown RBP19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 RRP1P56182 461 aaKnown RBP19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 FAM196AQ6ZSG2 479 aa19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 KAT6BQ8WYB5 2073 aa19.79■□□□□ 0.76
HERPUD1-219ENST00000570273 SNRPA1P09661 255 aaKnown RBP19.78■□□□□ 0.76
HERPUD1-219ENST00000570273 NECTIN2Q92692 538 aa19.78■□□□□ 0.76
HERPUD1-219ENST00000570273 C5P01031 1676 aa19.78■□□□□ 0.76
HERPUD1-219ENST00000570273 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 CCDC30Q5VVM6 783 aa19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 RNF123Q5XPI4 1314 aa19.77■□□□□ 0.76
HERPUD1-219ENST00000570273 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 STK31Q9BXU1 1019 aa19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 PALLDQ8WX93 1383 aa19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
HERPUD1-219ENST00000570273 KIF16BQ96L93 1317 aa19.75■□□□□ 0.75
HERPUD1-219ENST00000570273 PTF1AQ7RTS3 328 aa19.75■□□□□ 0.75
HERPUD1-219ENST00000570273 FRAT1Q92837 279 aaPredicted RBP19.75■□□□□ 0.75
HERPUD1-219ENST00000570273 SBF2Q86WG5 1849 aa19.75■□□□□ 0.75
HERPUD1-219ENST00000570273 LAMB4A4D0S4 1761 aa19.74■□□□□ 0.75
HERPUD1-219ENST00000570273 BTAF1O14981 1849 aa19.74■□□□□ 0.75
HERPUD1-219ENST00000570273 PLIN1O60240 522 aa19.74■□□□□ 0.75
HERPUD1-219ENST00000570273 NEFLP07196 543 aa19.74■□□□□ 0.75
HERPUD1-219ENST00000570273 BCL11BQ9C0K0 894 aaPredicted RBP19.74■□□□□ 0.75
HERPUD1-219ENST00000570273 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
HERPUD1-219ENST00000570273 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
HERPUD1-219ENST00000570273 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
HERPUD1-219ENST00000570273 CHPF2Q9P2E5 772 aa19.72■□□□□ 0.75
HERPUD1-219ENST00000570273 TRIM37O94972 964 aa19.71■□□□□ 0.75
HERPUD1-219ENST00000570273 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
HERPUD1-219ENST00000570273 DNAJC10Q8IXB1 793 aa19.71■□□□□ 0.75
HERPUD1-219ENST00000570273 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms