RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
THUMPD1-205ENST00000570231 NRXN3Q9Y4C0 1643 aa9.69□□□□□ -0.86
THUMPD1-205ENST00000570231 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 KDM4AO75164 1064 aa9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 USP46P62068 366 aa9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 LMOD2Q6P5Q4 547 aa9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 BRICD5Q6PL45 260 aa9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 KIAA1210Q9ULL0 1709 aa9.68□□□□□ -0.86
THUMPD1-205ENST00000570231 LRPPRCP42704 1394 aaKnown RBP9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 CLCN1P35523 988 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 MSS51Q4VC12 460 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 PLA2G2CQ5R387 149 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 TRIM67Q6ZTA4 783 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 PRAM1Q96QH2 718 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 POGKQ9P215 609 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
THUMPD1-205ENST00000570231 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
THUMPD1-205ENST00000570231 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
THUMPD1-205ENST00000570231 LCE2BO14633 110 aa9.66□□□□□ -0.86
THUMPD1-205ENST00000570231 MED14O60244 1454 aa9.66□□□□□ -0.86
THUMPD1-205ENST00000570231 PLEKHH1Q9ULM0 1364 aa9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 WAPLQ7Z5K2 1190 aa9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 FAM160A2Q8N612 972 aaPredicted RBP9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 GPCPD1Q9NPB8 672 aa9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 DIP2AQ14689 1571 aa9.65□□□□□ -0.86
THUMPD1-205ENST00000570231 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 GDF9O60383 454 aa9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 TESK2Q96S53 571 aa9.64□□□□□ -0.87
THUMPD1-205ENST00000570231 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 ROBO2Q9HCK4 1378 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 DISP3Q9P2K9 1392 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 KIF7Q2M1P5 1343 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 KCNA6P17658 529 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 TMF1P82094 1093 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 FOXC1Q12948 553 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
THUMPD1-205ENST00000570231 POLR1AO95602 1720 aaPredicted RBP9.62□□□□□ -0.87
THUMPD1-205ENST00000570231 WASHC2AQ641Q2 1341 aa9.62□□□□□ -0.87
THUMPD1-205ENST00000570231 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 TECPR2O15040 1411 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 CPS1P31327 1500 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
THUMPD1-205ENST00000570231 ARHGEF28Q8N1W1 1705 aaKnown RBP9.6□□□□□ -0.87
THUMPD1-205ENST00000570231 DDX10Q13206 875 aaKnown RBP9.6□□□□□ -0.87
THUMPD1-205ENST00000570231 ZNF335Q9H4Z2 1342 aaPredicted RBP9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 PTCH1Q13635 1447 aa9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 FAM135BQ49AJ0 1406 aa9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 QRICH2Q9H0J4 1663 aa9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 SRPK2P78362 688 aaKnown RBP9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 MYT1Q01538 1121 aa9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
THUMPD1-205ENST00000570231 EVC2Q86UK5 1308 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 HOXA2O43364 376 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 MMP16P51512 607 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 CYP4X1Q8N118 509 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 XRN1Q8IZH2 1706 aaKnown RBP9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 SBNO2Q9Y2G9 1366 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 STRCQ7RTU9 1775 aa9.58□□□□□ -0.88
THUMPD1-205ENST00000570231 KNDC1Q76NI1 1749 aa9.57□□□□□ -0.88
THUMPD1-205ENST00000570231 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
THUMPD1-205ENST00000570231 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
THUMPD1-205ENST00000570231 PKD2L1Q9P0L9 805 aa9.57□□□□□ -0.88
THUMPD1-205ENST00000570231 NWD1Q149M9 1564 aa9.56□□□□□ -0.88
THUMPD1-205ENST00000570231 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
THUMPD1-205ENST00000570231 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
THUMPD1-205ENST00000570231 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
THUMPD1-205ENST00000570231 DXOO77932 396 aaKnown RBP9.55□□□□□ -0.88
THUMPD1-205ENST00000570231 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
THUMPD1-205ENST00000570231 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
THUMPD1-205ENST00000570231 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 TTLL12Q14166 644 aaPredicted RBP9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 BARGINQ6ZT62 677 aa9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
THUMPD1-205ENST00000570231 TTC24A2A3L6 582 aaPredicted RBP9.53□□□□□ -0.88
THUMPD1-205ENST00000570231 TRIM32Q13049 653 aa9.53□□□□□ -0.88
THUMPD1-205ENST00000570231 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
THUMPD1-205ENST00000570231 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.89
THUMPD1-205ENST00000570231 HLA-CQ95604 372 aa9.52□□□□□ -0.89
THUMPD1-205ENST00000570231 SLC12A5Q9H2X9 1139 aa9.52□□□□□ -0.89
THUMPD1-205ENST00000570231 ADGRL3Q9HAR2 1447 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms