RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
GCOM1-213ENST00000569945 ERBB3P21860 1342 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
GCOM1-213ENST00000569945 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
GCOM1-213ENST00000569945 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
GCOM1-213ENST00000569945 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
GCOM1-213ENST00000569945 PTMSP20962 102 aa17.45■□□□□ 0.38
GCOM1-213ENST00000569945 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
GCOM1-213ENST00000569945 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
GCOM1-213ENST00000569945 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
GCOM1-213ENST00000569945 CIZ1Q9ULV3 898 aaPredicted RBP17.45■□□□□ 0.38
GCOM1-213ENST00000569945 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
GCOM1-213ENST00000569945 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
GCOM1-213ENST00000569945 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
GCOM1-213ENST00000569945 MEX3CQ5U5Q3 659 aaKnown RBP17.44■□□□□ 0.38
GCOM1-213ENST00000569945 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 PLCH1Q4KWH8 1693 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 SMC5Q8IY18 1101 aa17.44■□□□□ 0.38
GCOM1-213ENST00000569945 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 EVA1CP58658 441 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 PDLIM2Q96JY6 352 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
GCOM1-213ENST00000569945 PPP4R3BQ5MIZ7 849 aa17.42■□□□□ 0.38
GCOM1-213ENST00000569945 RGPD1P0DJD0 1748 aa17.42■□□□□ 0.38
GCOM1-213ENST00000569945 SLIT2O94813 1529 aa17.42■□□□□ 0.38
GCOM1-213ENST00000569945 PANK1Q8TE04 598 aa17.42■□□□□ 0.38
GCOM1-213ENST00000569945 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
GCOM1-213ENST00000569945 ARID3AQ99856 593 aa17.42■□□□□ 0.38
GCOM1-213ENST00000569945 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 ABCC6O95255 1503 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 WDR17Q8IZU2 1322 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 KIF20AO95235 890 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 SNX21Q969T3 373 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 GTPBP4Q9BZE4 634 aaKnown RBP17.41■□□□□ 0.38
GCOM1-213ENST00000569945 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
GCOM1-213ENST00000569945 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
GCOM1-213ENST00000569945 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
GCOM1-213ENST00000569945 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
GCOM1-213ENST00000569945 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
GCOM1-213ENST00000569945 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.38
GCOM1-213ENST00000569945 NRAPQ86VF7 1730 aa17.39■□□□□ 0.37
GCOM1-213ENST00000569945 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.37
GCOM1-213ENST00000569945 AFF2P51816 1311 aa17.39■□□□□ 0.37
GCOM1-213ENST00000569945 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
GCOM1-213ENST00000569945 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
GCOM1-213ENST00000569945 E9PSI1 815 aa17.38■□□□□ 0.37
GCOM1-213ENST00000569945 USP21Q9UK80 565 aa17.38■□□□□ 0.37
GCOM1-213ENST00000569945 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
GCOM1-213ENST00000569945 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
GCOM1-213ENST00000569945 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 TMEM51Q9NW97 253 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 MCM5P33992 734 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 ZNF445P59923 1031 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
GCOM1-213ENST00000569945 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
GCOM1-213ENST00000569945 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
GCOM1-213ENST00000569945 KDRP35968 1356 aa17.35■□□□□ 0.37
GCOM1-213ENST00000569945 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
GCOM1-213ENST00000569945 FCHSD2O94868 740 aa17.35■□□□□ 0.37
GCOM1-213ENST00000569945 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
GCOM1-213ENST00000569945 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
GCOM1-213ENST00000569945 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
GCOM1-213ENST00000569945 CRB1P82279 1406 aa17.34■□□□□ 0.37
GCOM1-213ENST00000569945 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
GCOM1-213ENST00000569945 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
GCOM1-213ENST00000569945 CARD10Q9BWT7 1032 aa17.34■□□□□ 0.37
GCOM1-213ENST00000569945 APAF1O14727 1248 aa17.33■□□□□ 0.36
GCOM1-213ENST00000569945 MEGF6O75095 1541 aa17.33■□□□□ 0.36
GCOM1-213ENST00000569945 IPO4Q8TEX9 1081 aaKnown RBP17.32■□□□□ 0.36
GCOM1-213ENST00000569945 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
GCOM1-213ENST00000569945 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
GCOM1-213ENST00000569945 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
GCOM1-213ENST00000569945 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
GCOM1-213ENST00000569945 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
GCOM1-213ENST00000569945 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
GCOM1-213ENST00000569945 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
GCOM1-213ENST00000569945 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
GCOM1-213ENST00000569945 VPS72Q15906 364 aa17.3■□□□□ 0.36
GCOM1-213ENST00000569945 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
GCOM1-213ENST00000569945 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
GCOM1-213ENST00000569945 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
GCOM1-213ENST00000569945 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
GCOM1-213ENST00000569945 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
GCOM1-213ENST00000569945 RLBP1P12271 317 aa17.29■□□□□ 0.36
GCOM1-213ENST00000569945 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
GCOM1-213ENST00000569945 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
GCOM1-213ENST00000569945 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
GCOM1-213ENST00000569945 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
GCOM1-213ENST00000569945 SSFA2P28290 1259 aa17.27■□□□□ 0.36
GCOM1-213ENST00000569945 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
GCOM1-213ENST00000569945 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms