RNA–Protein interactions for RNA: ENST00000569572.1

CARHSP1-214, Transcript of calcium regulated heat stable protein 1, humanhuman

TSL 3

Gene CARHSP1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-214ENST00000569572 PHKG2P15735 406 aa19.53■□□□□ 0.72
CARHSP1-214ENST00000569572 SSFA2P28290 1259 aa19.53■□□□□ 0.72
CARHSP1-214ENST00000569572 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
CARHSP1-214ENST00000569572 SLC4A9Q96Q91 983 aa19.53■□□□□ 0.72
CARHSP1-214ENST00000569572 POLKQ9UBT6 870 aa19.53■□□□□ 0.72
CARHSP1-214ENST00000569572 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
CARHSP1-214ENST00000569572 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
CARHSP1-214ENST00000569572 EIF4A2Q14240 407 aaKnown RBP19.5■□□□□ 0.71
CARHSP1-214ENST00000569572 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
CARHSP1-214ENST00000569572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
CARHSP1-214ENST00000569572 CDCA8Q53HL2 280 aa19.48■□□□□ 0.71
CARHSP1-214ENST00000569572 SPG7Q9UQ90 795 aa19.48■□□□□ 0.71
CARHSP1-214ENST00000569572 GNPATO15228 680 aa19.47■□□□□ 0.71
CARHSP1-214ENST00000569572 PPM1GO15355 546 aaPredicted RBP19.47■□□□□ 0.71
CARHSP1-214ENST00000569572 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
CARHSP1-214ENST00000569572 DLEC1Q9Y238 1755 aa19.46■□□□□ 0.71
CARHSP1-214ENST00000569572 KIF3CO14782 793 aa19.45■□□□□ 0.7
CARHSP1-214ENST00000569572 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
CARHSP1-214ENST00000569572 SBF1O95248 1867 aa19.45■□□□□ 0.7
CARHSP1-214ENST00000569572 AFDNP55196 1824 aaKnown RBP19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 ATP6V1AP38606 617 aa19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 GPBP1L1Q9HC44 474 aaPredicted RBP19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 WDR90Q96KV7 1748 aa19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 NRXN2Q9P2S2 1712 aa19.44■□□□□ 0.7
CARHSP1-214ENST00000569572 MMP10P09238 476 aa19.43■□□□□ 0.7
CARHSP1-214ENST00000569572 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
CARHSP1-214ENST00000569572 MRC1P22897 1456 aa19.42■□□□□ 0.7
CARHSP1-214ENST00000569572 UBR2Q8IWV8 1755 aa19.42■□□□□ 0.7
CARHSP1-214ENST00000569572 HSPA6P17066 643 aa19.41■□□□□ 0.7
CARHSP1-214ENST00000569572 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
CARHSP1-214ENST00000569572 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
CARHSP1-214ENST00000569572 GYS1P13807 737 aa19.39■□□□□ 0.69
CARHSP1-214ENST00000569572 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
CARHSP1-214ENST00000569572 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
CARHSP1-214ENST00000569572 KCPQ6ZWJ8 1503 aa19.38■□□□□ 0.69
CARHSP1-214ENST00000569572 AEBP1Q8IUX7 1158 aa19.38■□□□□ 0.69
CARHSP1-214ENST00000569572 TNRC6CQ9HCJ0 1690 aaKnown RBP19.38■□□□□ 0.69
CARHSP1-214ENST00000569572 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
CARHSP1-214ENST00000569572 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
CARHSP1-214ENST00000569572 KCNA3P22001 575 aa19.36■□□□□ 0.69
CARHSP1-214ENST00000569572 SIPA1L3O60292 1781 aaPredicted RBP19.36■□□□□ 0.69
CARHSP1-214ENST00000569572 TIAM2Q8IVF5 1701 aa19.36■□□□□ 0.69
CARHSP1-214ENST00000569572 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
CARHSP1-214ENST00000569572 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
CARHSP1-214ENST00000569572 DCAF5Q96JK2 942 aa19.35■□□□□ 0.69
CARHSP1-214ENST00000569572 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
CARHSP1-214ENST00000569572 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
CARHSP1-214ENST00000569572 ANKRD31Q8N7Z5 1873 aa19.34■□□□□ 0.69
CARHSP1-214ENST00000569572 DPEP1P16444 411 aa19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 ADRA2BP18089 450 aa19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 TGFB2P61812 414 aa19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 DDR1Q08345 913 aa19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 COL11A2P13942 1736 aaPredicted RBP19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 SCN7AQ01118 1682 aa19.33■□□□□ 0.68
CARHSP1-214ENST00000569572 ZNF530Q6P9A1 599 aaPredicted RBP19.32■□□□□ 0.68
CARHSP1-214ENST00000569572 SRP68Q9UHB9 627 aaKnown RBP19.32■□□□□ 0.68
CARHSP1-214ENST00000569572 CCDC88AQ3V6T2 1871 aa19.32■□□□□ 0.68
CARHSP1-214ENST00000569572 USP42Q9H9J4 1324 aaKnown RBP19.31■□□□□ 0.68
CARHSP1-214ENST00000569572 TRAPPC3LQ5T215 181 aa19.31■□□□□ 0.68
CARHSP1-214ENST00000569572 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
CARHSP1-214ENST00000569572 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
CARHSP1-214ENST00000569572 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
CARHSP1-214ENST00000569572 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
CARHSP1-214ENST00000569572 NLGN1Q8N2Q7 840 aa19.3■□□□□ 0.68
CARHSP1-214ENST00000569572 PANK3Q9H999 370 aa19.3■□□□□ 0.68
CARHSP1-214ENST00000569572 NMRK2Q9NPI5 230 aa19.3■□□□□ 0.68
CARHSP1-214ENST00000569572 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
CARHSP1-214ENST00000569572 FKBP8Q14318 412 aa19.28■□□□□ 0.68
CARHSP1-214ENST00000569572 PLEKHO1Q53GL0 409 aaPredicted RBP19.28■□□□□ 0.68
CARHSP1-214ENST00000569572 IL13P35225 146 aa19.27■□□□□ 0.68
CARHSP1-214ENST00000569572 INTS5Q6P9B9 1019 aaKnown RBP19.27■□□□□ 0.68
CARHSP1-214ENST00000569572 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
CARHSP1-214ENST00000569572 CCDC87Q9NVE4 849 aa19.27■□□□□ 0.68
CARHSP1-214ENST00000569572 COL3A1P02461 1466 aaPredicted RBP19.27■□□□□ 0.67
CARHSP1-214ENST00000569572 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 CABP4P57796 275 aa19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
CARHSP1-214ENST00000569572 RFC4P35249 363 aa19.25■□□□□ 0.67
CARHSP1-214ENST00000569572 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
CARHSP1-214ENST00000569572 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
CARHSP1-214ENST00000569572 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
CARHSP1-214ENST00000569572 FCHSD2O94868 740 aa19.24■□□□□ 0.67
CARHSP1-214ENST00000569572 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
CARHSP1-214ENST00000569572 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
CARHSP1-214ENST00000569572 CARMIL3Q8ND23 1372 aa19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 MTHFSP49914 203 aa19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 SULT6B1Q6IMI4 303 aa19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 ARHGAP27Q6ZUM4 889 aa19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 DICER1Q9UPY3 1922 aaKnown RBP19.23■□□□□ 0.67
CARHSP1-214ENST00000569572 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
CARHSP1-214ENST00000569572 TOMM70O94826 608 aa19.22■□□□□ 0.67
CARHSP1-214ENST00000569572 TM4SF1P30408 202 aa19.22■□□□□ 0.67
CARHSP1-214ENST00000569572 CHRNA5P30532 468 aa19.22■□□□□ 0.67
CARHSP1-214ENST00000569572 PRELPP51888 382 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms