RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 BRCA1P38398 1863 aaKnown RBP25.22■■□□□ 1.63
MSLN-208ENST00000569566 MSL1Q68DK7 614 aa25.22■■□□□ 1.63
MSLN-208ENST00000569566 LINC00116Q8NCU8 138 aa25.22■■□□□ 1.63
MSLN-208ENST00000569566 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
MSLN-208ENST00000569566 PER1O15534 1290 aaPredicted RBP25.21■■□□□ 1.63
MSLN-208ENST00000569566 ITPK1Q13572 414 aa25.21■■□□□ 1.63
MSLN-208ENST00000569566 IL13P35225 146 aa25.2■■□□□ 1.62
MSLN-208ENST00000569566 NLGN2Q8NFZ4 835 aa25.2■■□□□ 1.62
MSLN-208ENST00000569566 ZNF530Q6P9A1 599 aaPredicted RBP25.19■■□□□ 1.62
MSLN-208ENST00000569566 SMIM5Q71RC9 77 aa25.19■■□□□ 1.62
MSLN-208ENST00000569566 AK7Q96M32 723 aa25.19■■□□□ 1.62
MSLN-208ENST00000569566 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
MSLN-208ENST00000569566 MSH5O43196 834 aa25.18■■□□□ 1.62
MSLN-208ENST00000569566 KLHL34Q8N239 644 aa25.18■■□□□ 1.62
MSLN-208ENST00000569566 N4BP2Q86UW6 1770 aaPredicted RBP25.18■■□□□ 1.62
MSLN-208ENST00000569566 NPC1L1Q9UHC9 1359 aa25.18■■□□□ 1.62
MSLN-208ENST00000569566 DCAF5Q96JK2 942 aa25.16■■□□□ 1.62
MSLN-208ENST00000569566 SLC4A9Q96Q91 983 aa25.16■■□□□ 1.62
MSLN-208ENST00000569566 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
MSLN-208ENST00000569566 SULT6B1Q6IMI4 303 aa25.15■■□□□ 1.62
MSLN-208ENST00000569566 FLAD1Q8NFF5 587 aa25.15■■□□□ 1.62
MSLN-208ENST00000569566 KCPQ6ZWJ8 1503 aa25.14■■□□□ 1.62
MSLN-208ENST00000569566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.14■■□□□ 1.62
MSLN-208ENST00000569566 ERVV-2B6SEH9 535 aa25.14■■□□□ 1.62
MSLN-208ENST00000569566 PHF14O94880 888 aa25.14■■□□□ 1.62
MSLN-208ENST00000569566 SSFA2P28290 1259 aa25.14■■□□□ 1.62
MSLN-208ENST00000569566 AMOTQ4VCS5 1084 aa25.14■■□□□ 1.62
MSLN-208ENST00000569566 HSP90AB1P08238 724 aaKnown RBP25.13■■□□□ 1.61
MSLN-208ENST00000569566 MTHFSP49914 203 aa25.12■■□□□ 1.61
MSLN-208ENST00000569566 GNPATO15228 680 aa25.11■■□□□ 1.61
MSLN-208ENST00000569566 HMGB2P26583 209 aaKnown RBP25.11■■□□□ 1.61
MSLN-208ENST00000569566 ATP6V1AP38606 617 aa25.11■■□□□ 1.61
MSLN-208ENST00000569566 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
MSLN-208ENST00000569566 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
MSLN-208ENST00000569566 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.6
MSLN-208ENST00000569566 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.6
MSLN-208ENST00000569566 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
MSLN-208ENST00000569566 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
MSLN-208ENST00000569566 ARFGEF1Q9Y6D6 1849 aa25.06■■□□□ 1.6
MSLN-208ENST00000569566 HMOX1P09601 288 aa25.05■■□□□ 1.6
MSLN-208ENST00000569566 CABP4P57796 275 aa25.05■■□□□ 1.6
MSLN-208ENST00000569566 GPR162Q16538 588 aa25.05■■□□□ 1.6
MSLN-208ENST00000569566 SCN7AQ01118 1682 aa25.04■■□□□ 1.6
MSLN-208ENST00000569566 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
MSLN-208ENST00000569566 RBM42Q9BTD8 480 aaKnown RBP25.04■■□□□ 1.6
MSLN-208ENST00000569566 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
MSLN-208ENST00000569566 DLEC1Q9Y238 1755 aa25.03■■□□□ 1.6
MSLN-208ENST00000569566 PXDNLA1KZ92 1463 aa25.02■■□□□ 1.6
MSLN-208ENST00000569566 AKAP4Q5JQC9 854 aa25.02■■□□□ 1.6
MSLN-208ENST00000569566 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
MSLN-208ENST00000569566 CD2APQ9Y5K6 639 aa25.02■■□□□ 1.6
MSLN-208ENST00000569566 NRXN2Q9P2S2 1712 aa25.02■■□□□ 1.6
MSLN-208ENST00000569566 DIAPH1O60610 1272 aaKnown RBP25■■□□□ 1.59
MSLN-208ENST00000569566 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
MSLN-208ENST00000569566 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
MSLN-208ENST00000569566 BCORQ6W2J9 1755 aa24.98■■□□□ 1.59
MSLN-208ENST00000569566 PTCD1O75127 700 aaKnown RBP24.98■■□□□ 1.59
MSLN-208ENST00000569566 RTCBQ9Y3I0 505 aaKnown RBP24.98■■□□□ 1.59
MSLN-208ENST00000569566 MTHFSDQ2M296 383 aaKnown RBP24.97■■□□□ 1.59
MSLN-208ENST00000569566 SLC52A2Q9HAB3 445 aa24.97■■□□□ 1.59
MSLN-208ENST00000569566 ADRA2BP18089 450 aa24.96■■□□□ 1.59
MSLN-208ENST00000569566 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
MSLN-208ENST00000569566 ADCY9O60503 1353 aa24.95■■□□□ 1.59
MSLN-208ENST00000569566 RNMTO43148 476 aaKnown RBP24.95■■□□□ 1.58
MSLN-208ENST00000569566 RPS6KA4O75676 772 aa24.95■■□□□ 1.58
MSLN-208ENST00000569566 MMP10P09238 476 aa24.95■■□□□ 1.58
MSLN-208ENST00000569566 CRKLP46109 303 aaKnown RBP24.95■■□□□ 1.58
MSLN-208ENST00000569566 CNGB1Q14028 1251 aaPredicted RBP24.95■■□□□ 1.58
MSLN-208ENST00000569566 ARHGEF1Q92888 912 aaKnown RBP24.94■■□□□ 1.58
MSLN-208ENST00000569566 LAMB4A4D0S4 1761 aa24.93■■□□□ 1.58
MSLN-208ENST00000569566 GYS1P13807 737 aa24.93■■□□□ 1.58
MSLN-208ENST00000569566 ANKRD31Q8N7Z5 1873 aa24.92■■□□□ 1.58
MSLN-208ENST00000569566 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
MSLN-208ENST00000569566 USP42Q9H9J4 1324 aaKnown RBP24.9■■□□□ 1.58
MSLN-208ENST00000569566 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
MSLN-208ENST00000569566 GRIN3BO60391 1043 aa24.89■■□□□ 1.58
MSLN-208ENST00000569566 SLC39A6Q13433 755 aa24.89■■□□□ 1.58
MSLN-208ENST00000569566 DNAJC10Q8IXB1 793 aa24.89■■□□□ 1.58
MSLN-208ENST00000569566 COL11A2P13942 1736 aaPredicted RBP24.89■■□□□ 1.57
MSLN-208ENST00000569566 U2SURPO15042 1029 aaKnown RBP24.88■■□□□ 1.57
MSLN-208ENST00000569566 INTS5Q6P9B9 1019 aaKnown RBP24.88■■□□□ 1.57
MSLN-208ENST00000569566 SRP68Q9UHB9 627 aaKnown RBP24.88■■□□□ 1.57
MSLN-208ENST00000569566 WWC3Q9ULE0 1092 aa24.88■■□□□ 1.57
MSLN-208ENST00000569566 SOS1Q07889 1333 aaPredicted RBP24.87■■□□□ 1.57
MSLN-208ENST00000569566 SBF1O95248 1867 aa24.87■■□□□ 1.57
MSLN-208ENST00000569566 ATP10DQ9P241 1426 aa24.87■■□□□ 1.57
MSLN-208ENST00000569566 CEMIPQ8WUJ3 1361 aa24.87■■□□□ 1.57
MSLN-208ENST00000569566 CACNA1SQ13698 1873 aa24.86■■□□□ 1.57
MSLN-208ENST00000569566 COL15A1P39059 1388 aa24.86■■□□□ 1.57
MSLN-208ENST00000569566 RFC4P35249 363 aa24.86■■□□□ 1.57
MSLN-208ENST00000569566 NLGN1Q8N2Q7 840 aa24.86■■□□□ 1.57
MSLN-208ENST00000569566 RSPH6AQ9H0K4 717 aa24.85■■□□□ 1.57
MSLN-208ENST00000569566 CCDC87Q9NVE4 849 aa24.85■■□□□ 1.57
MSLN-208ENST00000569566 CYP19A1P11511 503 aaPredicted RBP24.84■■□□□ 1.57
MSLN-208ENST00000569566 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
MSLN-208ENST00000569566 DDR1Q08345 913 aa24.83■■□□□ 1.57
MSLN-208ENST00000569566 FKBP8Q14318 412 aa24.82■■□□□ 1.56
MSLN-208ENST00000569566 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
MSLN-208ENST00000569566 ZBTB1Q9Y2K1 713 aa24.82■■□□□ 1.56
MSLN-208ENST00000569566 PRKAR2BP31323 418 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms