RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 CEMIPQ8WUJ3 1361 aa21.16■□□□□ 0.98
NEIL1-223ENST00000569506 DUSP27Q5VZP5 1158 aa21.16■□□□□ 0.98
NEIL1-223ENST00000569506 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
NEIL1-223ENST00000569506 CFAP44Q96MT7 982 aa21.15■□□□□ 0.98
NEIL1-223ENST00000569506 ZNF853P0CG23 659 aa21.14■□□□□ 0.97
NEIL1-223ENST00000569506 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
NEIL1-223ENST00000569506 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
NEIL1-223ENST00000569506 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
NEIL1-223ENST00000569506 SPON1Q9HCB6 807 aa21.14■□□□□ 0.97
NEIL1-223ENST00000569506 RGPD3A6NKT7 1758 aaPredicted RBP21.14■□□□□ 0.97
NEIL1-223ENST00000569506 RGPD4Q7Z3J3 1758 aa21.14■□□□□ 0.97
NEIL1-223ENST00000569506 TNS2Q63HR2 1409 aa21.13■□□□□ 0.97
NEIL1-223ENST00000569506 DDB1Q16531 1140 aa21.13■□□□□ 0.97
NEIL1-223ENST00000569506 DDX54Q8TDD1 881 aaKnown RBP21.13■□□□□ 0.97
NEIL1-223ENST00000569506 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
NEIL1-223ENST00000569506 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
NEIL1-223ENST00000569506 PPP1R1BQ9UD71 204 aaPredicted RBP21.13■□□□□ 0.97
NEIL1-223ENST00000569506 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
NEIL1-223ENST00000569506 LRRC37A3O60309 1634 aa21.12■□□□□ 0.97
NEIL1-223ENST00000569506 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
NEIL1-223ENST00000569506 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
NEIL1-223ENST00000569506 CHL1O00533 1208 aa21.11■□□□□ 0.97
NEIL1-223ENST00000569506 KCNQ2O43526 872 aa21.11■□□□□ 0.97
NEIL1-223ENST00000569506 TEFQ10587 303 aa21.11■□□□□ 0.97
NEIL1-223ENST00000569506 TAF7Q15545 349 aaPredicted RBP21.11■□□□□ 0.97
NEIL1-223ENST00000569506 SHANK3Q9BYB0 1731 aa21.11■□□□□ 0.97
NEIL1-223ENST00000569506 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
NEIL1-223ENST00000569506 KDM6AO15550 1401 aaPredicted RBP21.1■□□□□ 0.97
NEIL1-223ENST00000569506 TSR2Q969E8 191 aaKnown RBP21.08■□□□□ 0.97
NEIL1-223ENST00000569506 MBIPQ9NS73 344 aa21.08■□□□□ 0.97
NEIL1-223ENST00000569506 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.96
NEIL1-223ENST00000569506 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
NEIL1-223ENST00000569506 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
NEIL1-223ENST00000569506 SBF2Q86WG5 1849 aa21.06■□□□□ 0.96
NEIL1-223ENST00000569506 CASZ1Q86V15 1759 aa21.06■□□□□ 0.96
NEIL1-223ENST00000569506 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
NEIL1-223ENST00000569506 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
NEIL1-223ENST00000569506 MRC1P22897 1456 aa21.05■□□□□ 0.96
NEIL1-223ENST00000569506 CT47B1P0C2W7 299 aaPredicted RBP21.04■□□□□ 0.96
NEIL1-223ENST00000569506 CABP4P57796 275 aa21.04■□□□□ 0.96
NEIL1-223ENST00000569506 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
NEIL1-223ENST00000569506 EXOSC9Q06265 439 aaKnown RBP21.03■□□□□ 0.96
NEIL1-223ENST00000569506 UTRNP46939 3433 aa21.03■□□□□ 0.96
NEIL1-223ENST00000569506 PLSCR1O15162 318 aa21.02■□□□□ 0.96
NEIL1-223ENST00000569506 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.96
NEIL1-223ENST00000569506 MIS18AQ9NYP9 233 aa21.02■□□□□ 0.96
NEIL1-223ENST00000569506 SIPA1L3O60292 1781 aaPredicted RBP21.01■□□□□ 0.95
NEIL1-223ENST00000569506 NFATC2IPQ8NCF5 419 aa21.01■□□□□ 0.95
NEIL1-223ENST00000569506 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
NEIL1-223ENST00000569506 ZNF428Q96B54 188 aa20.98■□□□□ 0.95
NEIL1-223ENST00000569506 ANO8Q9HCE9 1232 aaPredicted RBP20.98■□□□□ 0.95
NEIL1-223ENST00000569506 TMOD3Q9NYL9 352 aa20.98■□□□□ 0.95
NEIL1-223ENST00000569506 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
NEIL1-223ENST00000569506 KDM3BQ7LBC6 1761 aa20.97■□□□□ 0.95
NEIL1-223ENST00000569506 TOGARAM1Q9Y4F4 1720 aa20.96■□□□□ 0.95
NEIL1-223ENST00000569506 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
NEIL1-223ENST00000569506 C8orf58Q8NAV2 365 aa20.96■□□□□ 0.95
NEIL1-223ENST00000569506 BCL11BQ9C0K0 894 aaPredicted RBP20.96■□□□□ 0.95
NEIL1-223ENST00000569506 VAMP4O75379 141 aa20.95■□□□□ 0.94
NEIL1-223ENST00000569506 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
NEIL1-223ENST00000569506 ZNF790Q6PG37 636 aa20.95■□□□□ 0.94
NEIL1-223ENST00000569506 BCL9O00512 1426 aa20.95■□□□□ 0.94
NEIL1-223ENST00000569506 TTC5Q8N0Z6 440 aa20.94■□□□□ 0.94
NEIL1-223ENST00000569506 TSPYL6Q8N831 410 aa20.94■□□□□ 0.94
NEIL1-223ENST00000569506 KCNQ3O43525 872 aa20.93■□□□□ 0.94
NEIL1-223ENST00000569506 PIGBQ92521 554 aa20.93■□□□□ 0.94
NEIL1-223ENST00000569506 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
NEIL1-223ENST00000569506 HOXB7P09629 217 aa20.92■□□□□ 0.94
NEIL1-223ENST00000569506 PRIM1P49642 420 aaKnown RBP20.92■□□□□ 0.94
NEIL1-223ENST00000569506 RARSP54136 660 aaKnown RBP20.92■□□□□ 0.94
NEIL1-223ENST00000569506 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
NEIL1-223ENST00000569506 CHMP4AQ9BY43 222 aa20.92■□□□□ 0.94
NEIL1-223ENST00000569506 SUPT16HQ9Y5B9 1047 aaKnown RBP20.92■□□□□ 0.94
NEIL1-223ENST00000569506 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
NEIL1-223ENST00000569506 ITGB4P16144 1822 aa20.91■□□□□ 0.94
NEIL1-223ENST00000569506 PTGER2P43116 358 aa20.91■□□□□ 0.94
NEIL1-223ENST00000569506 KRT24Q2M2I5 525 aa20.91■□□□□ 0.94
NEIL1-223ENST00000569506 ALDH1L2Q3SY69 923 aa20.91■□□□□ 0.94
NEIL1-223ENST00000569506 ZNF784Q8NCA9 323 aaPredicted RBP20.91■□□□□ 0.94
NEIL1-223ENST00000569506 PDGFDQ9GZP0 370 aaPredicted RBP20.91■□□□□ 0.94
NEIL1-223ENST00000569506 CHD4Q14839 1912 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 HEG1Q9ULI3 1381 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 ZBTB7AO95365 584 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 PROM2Q8N271 834 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 SYTL4Q96C24 671 aaPredicted RBP20.9■□□□□ 0.94
NEIL1-223ENST00000569506 ACSBG1Q96GR2 724 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 FMNL2Q96PY5 1086 aa20.9■□□□□ 0.94
NEIL1-223ENST00000569506 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.93
NEIL1-223ENST00000569506 PTF1AQ7RTS3 328 aa20.89■□□□□ 0.93
NEIL1-223ENST00000569506 KAT6BQ8WYB5 2073 aa20.88■□□□□ 0.93
NEIL1-223ENST00000569506 PAPPAQ13219 1627 aa20.88■□□□□ 0.93
NEIL1-223ENST00000569506 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
NEIL1-223ENST00000569506 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.87■□□□□ 0.93
NEIL1-223ENST00000569506 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
NEIL1-223ENST00000569506 ZNF496Q96IT1 587 aaPredicted RBP20.87■□□□□ 0.93
NEIL1-223ENST00000569506 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
NEIL1-223ENST00000569506 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
NEIL1-223ENST00000569506 BCAR3O75815 825 aa20.86■□□□□ 0.93
NEIL1-223ENST00000569506 SNRPA1P09661 255 aaKnown RBP20.86■□□□□ 0.93
NEIL1-223ENST00000569506 STK32BQ9NY57 414 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms