RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 SIPA1L3O60292 1781 aaPredicted RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 CHL1O00533 1208 aa26.53■■□□□ 1.84
SPSB3-211ENST00000569380 EXOSC9Q06265 439 aaKnown RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 KRT24Q2M2I5 525 aa26.52■■□□□ 1.84
SPSB3-211ENST00000569380 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
SPSB3-211ENST00000569380 TEFQ10587 303 aa26.51■■□□□ 1.83
SPSB3-211ENST00000569380 TAF7Q15545 349 aaPredicted RBP26.51■■□□□ 1.83
SPSB3-211ENST00000569380 KCNQ3O43525 872 aa26.5■■□□□ 1.83
SPSB3-211ENST00000569380 NKX1-1Q15270 411 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-211ENST00000569380 MARCH10Q8NA82 808 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-211ENST00000569380 TSPYL4Q9UJ04 414 aa26.5■■□□□ 1.83
SPSB3-211ENST00000569380 FAM182BQ5T319 152 aa26.49■■□□□ 1.83
SPSB3-211ENST00000569380 HSP90AB1P08238 724 aaKnown RBP26.48■■□□□ 1.83
SPSB3-211ENST00000569380 NFATC2IPQ8NCF5 419 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 TSPYL6Q8N831 410 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 SLC52A2Q9HAB3 445 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 ELL2O00472 640 aaPredicted RBP26.47■■□□□ 1.83
SPSB3-211ENST00000569380 MRC1P22897 1456 aa26.47■■□□□ 1.83
SPSB3-211ENST00000569380 KDM3BQ7LBC6 1761 aa26.46■■□□□ 1.83
SPSB3-211ENST00000569380 C8orf58Q8NAV2 365 aa26.46■■□□□ 1.83
SPSB3-211ENST00000569380 BTBD11A6QL63 1104 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 SLC39A6Q13433 755 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 RCAN3Q9UKA8 241 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 SUPT16HQ9Y5B9 1047 aaKnown RBP26.45■■□□□ 1.82
SPSB3-211ENST00000569380 CABP4P57796 275 aa26.44■■□□□ 1.82
SPSB3-211ENST00000569380 DOT1LQ8TEK3 1739 aa26.44■■□□□ 1.82
SPSB3-211ENST00000569380 ITGB4P16144 1822 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 KAT6BQ8WYB5 2073 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 CCDC125Q86Z20 511 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 ACSBG1Q96GR2 724 aa26.41■■□□□ 1.82
SPSB3-211ENST00000569380 ERVV-2B6SEH9 535 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 DEFB132Q7Z7B7 95 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 BCL2L13Q9BXK5 485 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 TCERG1O14776 1098 aaKnown RBP26.38■■□□□ 1.81
SPSB3-211ENST00000569380 BCAR3O75815 825 aa26.38■■□□□ 1.81
SPSB3-211ENST00000569380 VAMP4O75379 141 aa26.37■■□□□ 1.81
SPSB3-211ENST00000569380 EIF4A1P60842 406 aaKnown RBP26.37■■□□□ 1.81
SPSB3-211ENST00000569380 TWISTNBQ3B726 338 aaPredicted RBP26.37■■□□□ 1.81
SPSB3-211ENST00000569380 BABAM1Q9NWV8 329 aa26.37■■□□□ 1.81
SPSB3-211ENST00000569380 PRIM1P49642 420 aaKnown RBP26.36■■□□□ 1.81
SPSB3-211ENST00000569380 PIGBQ92521 554 aa26.36■■□□□ 1.81
SPSB3-211ENST00000569380 SYTL4Q96C24 671 aaPredicted RBP26.36■■□□□ 1.81
SPSB3-211ENST00000569380 RARSP54136 660 aaKnown RBP26.35■■□□□ 1.81
SPSB3-211ENST00000569380 ZNF790Q6PG37 636 aa26.35■■□□□ 1.81
SPSB3-211ENST00000569380 TMOD3Q9NYL9 352 aa26.35■■□□□ 1.81
SPSB3-211ENST00000569380 PAPPAQ13219 1627 aa26.34■■□□□ 1.81
SPSB3-211ENST00000569380 PRAMEF22A3QJZ6 481 aa26.33■■□□□ 1.81
SPSB3-211ENST00000569380 KCNQ2O43526 872 aa26.33■■□□□ 1.81
SPSB3-211ENST00000569380 PLIN1O60240 522 aa26.33■■□□□ 1.8
SPSB3-211ENST00000569380 SF3B2Q13435 895 aaKnown RBP26.33■■□□□ 1.8
SPSB3-211ENST00000569380 PTF1AQ7RTS3 328 aa26.32■■□□□ 1.8
SPSB3-211ENST00000569380 NECTIN2Q92692 538 aa26.32■■□□□ 1.8
SPSB3-211ENST00000569380 BCL9O00512 1426 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-211ENST00000569380 SSH1Q8WYL5 1049 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 ZNF496Q96IT1 587 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-211ENST00000569380 ASAP1Q9ULH1 1129 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 C5P01031 1676 aa26.3■■□□□ 1.8
SPSB3-211ENST00000569380 TNS1Q9HBL0 1735 aaKnown RBP26.29■■□□□ 1.8
SPSB3-211ENST00000569380 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 CT47B1P0C2W7 299 aaPredicted RBP26.28■■□□□ 1.8
SPSB3-211ENST00000569380 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 KCPQ6ZWJ8 1503 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 HEG1Q9ULI3 1381 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 TTC5Q8N0Z6 440 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 RNF123Q5XPI4 1314 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
SPSB3-211ENST00000569380 TRIM37O94972 964 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 RRP1P56182 461 aaKnown RBP26.27■■□□□ 1.8
SPSB3-211ENST00000569380 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
SPSB3-211ENST00000569380 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
SPSB3-211ENST00000569380 EIF2S2P20042 333 aaKnown RBP26.24■■□□□ 1.79
SPSB3-211ENST00000569380 BAG6P46379 1132 aa26.24■■□□□ 1.79
SPSB3-211ENST00000569380 TNNQ9UQP3 1299 aa26.24■■□□□ 1.79
SPSB3-211ENST00000569380 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 MRPL50Q8N5N7 158 aaKnown RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 FRAT1Q92837 279 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 FMNL2Q96PY5 1086 aa26.22■■□□□ 1.79
SPSB3-211ENST00000569380 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
SPSB3-211ENST00000569380 SRCAPQ6ZRS2 3230 aa26.21■■□□□ 1.79
SPSB3-211ENST00000569380 C20orf194Q5TEA3 1177 aa26.21■■□□□ 1.79
SPSB3-211ENST00000569380 ALDH1L2Q3SY69 923 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 HDGFL1Q5TGJ6 251 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 USP16Q9Y5T5 823 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 RBM42Q9BTD8 480 aaKnown RBP26.2■■□□□ 1.78
SPSB3-211ENST00000569380 BTAF1O14981 1849 aa26.2■■□□□ 1.78
SPSB3-211ENST00000569380 SLC4A9Q96Q91 983 aa26.19■■□□□ 1.78
SPSB3-211ENST00000569380 ANXA1P04083 346 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 NOB1Q9ULX3 412 aaKnown RBP26.18■■□□□ 1.78
SPSB3-211ENST00000569380 G2E3Q7L622 706 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 ZNF428Q96B54 188 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 SNRPA1P09661 255 aaKnown RBP26.17■■□□□ 1.78
SPSB3-211ENST00000569380 PIP4K2AP48426 406 aaPredicted RBP26.17■■□□□ 1.78
SPSB3-211ENST00000569380 HOXB7P09629 217 aa26.16■■□□□ 1.78
SPSB3-211ENST00000569380 CHPF2Q9P2E5 772 aa26.16■■□□□ 1.78
SPSB3-211ENST00000569380 APBA3O96018 575 aa26.15■■□□□ 1.78
SPSB3-211ENST00000569380 SLC4A2P04920 1241 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms