RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 SIPA1L3O60292 1781 aaPredicted RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 CHL1O00533 1208 aa26.53■■□□□ 1.84
SPSB3-211ENST00000569380 EXOSC9Q06265 439 aaKnown RBP26.53■■□□□ 1.84
SPSB3-211ENST00000569380 KRT24Q2M2I5 525 aa26.52■■□□□ 1.84
SPSB3-211ENST00000569380 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
SPSB3-211ENST00000569380 TEFQ10587 303 aa26.51■■□□□ 1.83
SPSB3-211ENST00000569380 TAF7Q15545 349 aaPredicted RBP26.51■■□□□ 1.83
SPSB3-211ENST00000569380 KCNQ3O43525 872 aa26.5■■□□□ 1.83
SPSB3-211ENST00000569380 NKX1-1Q15270 411 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-211ENST00000569380 MARCH10Q8NA82 808 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-211ENST00000569380 TSPYL4Q9UJ04 414 aa26.5■■□□□ 1.83
SPSB3-211ENST00000569380 FAM182BQ5T319 152 aa26.49■■□□□ 1.83
SPSB3-211ENST00000569380 HSP90AB1P08238 724 aaKnown RBP26.48■■□□□ 1.83
SPSB3-211ENST00000569380 NFATC2IPQ8NCF5 419 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 TSPYL6Q8N831 410 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 SLC52A2Q9HAB3 445 aa26.48■■□□□ 1.83
SPSB3-211ENST00000569380 ELL2O00472 640 aaPredicted RBP26.47■■□□□ 1.83
SPSB3-211ENST00000569380 MRC1P22897 1456 aa26.47■■□□□ 1.83
SPSB3-211ENST00000569380 KDM3BQ7LBC6 1761 aa26.46■■□□□ 1.83
SPSB3-211ENST00000569380 C8orf58Q8NAV2 365 aa26.46■■□□□ 1.83
SPSB3-211ENST00000569380 BTBD11A6QL63 1104 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 SLC39A6Q13433 755 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 RCAN3Q9UKA8 241 aa26.45■■□□□ 1.82
SPSB3-211ENST00000569380 SUPT16HQ9Y5B9 1047 aaKnown RBP26.45■■□□□ 1.82
SPSB3-211ENST00000569380 CABP4P57796 275 aa26.44■■□□□ 1.82
SPSB3-211ENST00000569380 DOT1LQ8TEK3 1739 aa26.44■■□□□ 1.82
SPSB3-211ENST00000569380 ITGB4P16144 1822 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 KAT6BQ8WYB5 2073 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 CCDC125Q86Z20 511 aa26.43■■□□□ 1.82
SPSB3-211ENST00000569380 ACSBG1Q96GR2 724 aa26.41■■□□□ 1.82
SPSB3-211ENST00000569380 ERVV-2B6SEH9 535 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 DEFB132Q7Z7B7 95 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 BCL2L13Q9BXK5 485 aa26.39■■□□□ 1.82
SPSB3-211ENST00000569380 TCERG1O14776 1098 aaKnown RBP26.38■■□□□ 1.81
SPSB3-211ENST00000569380 BCAR3O75815 825 aa26.38■■□□□ 1.81
SPSB3-211ENST00000569380 VAMP4O75379 141 aa26.37■■□□□ 1.81
SPSB3-211ENST00000569380 EIF4A1P60842 406 aaKnown RBP26.37■■□□□ 1.81
SPSB3-211ENST00000569380 TWISTNBQ3B726 338 aaPredicted RBP26.37■■□□□ 1.81
SPSB3-211ENST00000569380 BABAM1Q9NWV8 329 aa26.37■■□□□ 1.81
SPSB3-211ENST00000569380 PRIM1P49642 420 aaKnown RBP26.36■■□□□ 1.81
SPSB3-211ENST00000569380 PIGBQ92521 554 aa26.36■■□□□ 1.81
SPSB3-211ENST00000569380 SYTL4Q96C24 671 aaPredicted RBP26.36■■□□□ 1.81
SPSB3-211ENST00000569380 RARSP54136 660 aaKnown RBP26.35■■□□□ 1.81
SPSB3-211ENST00000569380 ZNF790Q6PG37 636 aa26.35■■□□□ 1.81
SPSB3-211ENST00000569380 TMOD3Q9NYL9 352 aa26.35■■□□□ 1.81
SPSB3-211ENST00000569380 PAPPAQ13219 1627 aa26.34■■□□□ 1.81
SPSB3-211ENST00000569380 PRAMEF22A3QJZ6 481 aa26.33■■□□□ 1.81
SPSB3-211ENST00000569380 KCNQ2O43526 872 aa26.33■■□□□ 1.81
SPSB3-211ENST00000569380 PLIN1O60240 522 aa26.33■■□□□ 1.8
SPSB3-211ENST00000569380 SF3B2Q13435 895 aaKnown RBP26.33■■□□□ 1.8
SPSB3-211ENST00000569380 PTF1AQ7RTS3 328 aa26.32■■□□□ 1.8
SPSB3-211ENST00000569380 NECTIN2Q92692 538 aa26.32■■□□□ 1.8
SPSB3-211ENST00000569380 BCL9O00512 1426 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-211ENST00000569380 SSH1Q8WYL5 1049 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 ZNF496Q96IT1 587 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-211ENST00000569380 ASAP1Q9ULH1 1129 aa26.31■■□□□ 1.8
SPSB3-211ENST00000569380 C5P01031 1676 aa26.3■■□□□ 1.8
SPSB3-211ENST00000569380 TNS1Q9HBL0 1735 aaKnown RBP26.29■■□□□ 1.8
SPSB3-211ENST00000569380 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 CT47B1P0C2W7 299 aaPredicted RBP26.28■■□□□ 1.8
SPSB3-211ENST00000569380 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 KCPQ6ZWJ8 1503 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 HEG1Q9ULI3 1381 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 TTC5Q8N0Z6 440 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
SPSB3-211ENST00000569380 RNF123Q5XPI4 1314 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
SPSB3-211ENST00000569380 TRIM37O94972 964 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 RRP1P56182 461 aaKnown RBP26.27■■□□□ 1.8
SPSB3-211ENST00000569380 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
SPSB3-211ENST00000569380 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
SPSB3-211ENST00000569380 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
SPSB3-211ENST00000569380 EIF2S2P20042 333 aaKnown RBP26.24■■□□□ 1.79
SPSB3-211ENST00000569380 BAG6P46379 1132 aa26.24■■□□□ 1.79
SPSB3-211ENST00000569380 TNNQ9UQP3 1299 aa26.24■■□□□ 1.79
SPSB3-211ENST00000569380 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 MRPL50Q8N5N7 158 aaKnown RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 FRAT1Q92837 279 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-211ENST00000569380 FMNL2Q96PY5 1086 aa26.22■■□□□ 1.79
SPSB3-211ENST00000569380 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
SPSB3-211ENST00000569380 SRCAPQ6ZRS2 3230 aa26.21■■□□□ 1.79
SPSB3-211ENST00000569380 C20orf194Q5TEA3 1177 aa26.21■■□□□ 1.79
SPSB3-211ENST00000569380 ALDH1L2Q3SY69 923 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 HDGFL1Q5TGJ6 251 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 USP16Q9Y5T5 823 aa26.2■■□□□ 1.79
SPSB3-211ENST00000569380 RBM42Q9BTD8 480 aaKnown RBP26.2■■□□□ 1.78
SPSB3-211ENST00000569380 BTAF1O14981 1849 aa26.2■■□□□ 1.78
SPSB3-211ENST00000569380 SLC4A9Q96Q91 983 aa26.19■■□□□ 1.78
SPSB3-211ENST00000569380 ANXA1P04083 346 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 NOB1Q9ULX3 412 aaKnown RBP26.18■■□□□ 1.78
SPSB3-211ENST00000569380 G2E3Q7L622 706 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 ZNF428Q96B54 188 aa26.18■■□□□ 1.78
SPSB3-211ENST00000569380 SNRPA1P09661 255 aaKnown RBP26.17■■□□□ 1.78
SPSB3-211ENST00000569380 PIP4K2AP48426 406 aaPredicted RBP26.17■■□□□ 1.78
SPSB3-211ENST00000569380 HOXB7P09629 217 aa26.16■■□□□ 1.78
SPSB3-211ENST00000569380 CHPF2Q9P2E5 772 aa26.16■■□□□ 1.78
SPSB3-211ENST00000569380 APBA3O96018 575 aa26.15■■□□□ 1.78
SPSB3-211ENST00000569380 SLC4A2P04920 1241 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms