RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
CLN6-209ENST00000569336 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
CLN6-209ENST00000569336 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
CLN6-209ENST00000569336 NEFMP07197 916 aa13.1□□□□□ -0.31
CLN6-209ENST00000569336 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
CLN6-209ENST00000569336 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLN6-209ENST00000569336 SLC15A2Q16348 729 aa13.1□□□□□ -0.31
CLN6-209ENST00000569336 PIGBQ92521 554 aa13.1□□□□□ -0.31
CLN6-209ENST00000569336 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
CLN6-209ENST00000569336 CABP4P57796 275 aa13.09□□□□□ -0.31
CLN6-209ENST00000569336 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
CLN6-209ENST00000569336 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
CLN6-209ENST00000569336 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
CLN6-209ENST00000569336 FCHSD2O94868 740 aa13.08□□□□□ -0.32
CLN6-209ENST00000569336 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
CLN6-209ENST00000569336 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
CLN6-209ENST00000569336 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
CLN6-209ENST00000569336 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
CLN6-209ENST00000569336 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 SIK1P57059 783 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 SPON1Q9HCB6 807 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
CLN6-209ENST00000569336 CHD4Q14839 1912 aa13.05□□□□□ -0.32
CLN6-209ENST00000569336 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
CLN6-209ENST00000569336 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
CLN6-209ENST00000569336 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
CLN6-209ENST00000569336 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
CLN6-209ENST00000569336 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
CLN6-209ENST00000569336 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
CLN6-209ENST00000569336 KCNQ4P56696 695 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 TEFQ10587 303 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 AK7Q96M32 723 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
CLN6-209ENST00000569336 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
CLN6-209ENST00000569336 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
CLN6-209ENST00000569336 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
CLN6-209ENST00000569336 MTFR1LQ9H019 292 aa13.03□□□□□ -0.32
CLN6-209ENST00000569336 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
CLN6-209ENST00000569336 SCN7AQ01118 1682 aa13.02□□□□□ -0.32
CLN6-209ENST00000569336 WDR43Q15061 677 aaKnown RBP eCLIP13.02□□□□□ -0.33
CLN6-209ENST00000569336 SLC16A10Q8TF71 515 aa13.02□□□□□ -0.33
CLN6-209ENST00000569336 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
CLN6-209ENST00000569336 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
CLN6-209ENST00000569336 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
CLN6-209ENST00000569336 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
CLN6-209ENST00000569336 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
CLN6-209ENST00000569336 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
CLN6-209ENST00000569336 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
CLN6-209ENST00000569336 CNTNAP4Q9C0A0 1308 aa13□□□□□ -0.33
CLN6-209ENST00000569336 HTATSF1O43719 755 aaKnown RBP13□□□□□ -0.33
CLN6-209ENST00000569336 ZBTB7AO95365 584 aa13□□□□□ -0.33
CLN6-209ENST00000569336 TTC5Q8N0Z6 440 aa13□□□□□ -0.33
CLN6-209ENST00000569336 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
CLN6-209ENST00000569336 SSFA2P28290 1259 aa12.99□□□□□ -0.33
CLN6-209ENST00000569336 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
CLN6-209ENST00000569336 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
CLN6-209ENST00000569336 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
CLN6-209ENST00000569336 MSH5O43196 834 aa12.98□□□□□ -0.33
CLN6-209ENST00000569336 ITPK1Q13572 414 aa12.98□□□□□ -0.33
CLN6-209ENST00000569336 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
CLN6-209ENST00000569336 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
CLN6-209ENST00000569336 NUP98P52948 1817 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 GNPATO15228 680 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 ANP32CO43423 234 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CLN6-209ENST00000569336 ADRA2BP18089 450 aa12.96□□□□□ -0.33
CLN6-209ENST00000569336 POLD1P28340 1107 aa12.96□□□□□ -0.33
CLN6-209ENST00000569336 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.33
CLN6-209ENST00000569336 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
CLN6-209ENST00000569336 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
CLN6-209ENST00000569336 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
CLN6-209ENST00000569336 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
CLN6-209ENST00000569336 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
CLN6-209ENST00000569336 PHF14O94880 888 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 MCM10Q7L590 875 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
CLN6-209ENST00000569336 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
CLN6-209ENST00000569336 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
CLN6-209ENST00000569336 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
CLN6-209ENST00000569336 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
CLN6-209ENST00000569336 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
CLN6-209ENST00000569336 PTGER2P43116 358 aa12.94□□□□□ -0.34
CLN6-209ENST00000569336 CRKLP46109 303 aaKnown RBP12.94□□□□□ -0.34
CLN6-209ENST00000569336 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
CLN6-209ENST00000569336 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
CLN6-209ENST00000569336 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
CLN6-209ENST00000569336 ARFGEF1Q9Y6D6 1849 aa12.93□□□□□ -0.34
CLN6-209ENST00000569336 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
CLN6-209ENST00000569336 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms