RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 USP35Q9P2H5 1018 aa12.21□□□□□ -0.45
LINC00555-201ENST00000569288 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
LINC00555-201ENST00000569288 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
LINC00555-201ENST00000569288 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
LINC00555-201ENST00000569288 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
LINC00555-201ENST00000569288 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
LINC00555-201ENST00000569288 EXOC5O00471 708 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 DDB1Q16531 1140 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 MEGF6O75095 1541 aa12.19□□□□□ -0.46
LINC00555-201ENST00000569288 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
LINC00555-201ENST00000569288 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
LINC00555-201ENST00000569288 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
LINC00555-201ENST00000569288 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
LINC00555-201ENST00000569288 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
LINC00555-201ENST00000569288 MCM10Q7L590 875 aa12.17□□□□□ -0.46
LINC00555-201ENST00000569288 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
LINC00555-201ENST00000569288 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
LINC00555-201ENST00000569288 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
LINC00555-201ENST00000569288 BCAR3O75815 825 aa12.16□□□□□ -0.46
LINC00555-201ENST00000569288 TEFQ10587 303 aa12.16□□□□□ -0.46
LINC00555-201ENST00000569288 SSH1Q8WYL5 1049 aa12.16□□□□□ -0.46
LINC00555-201ENST00000569288 PTPRCP08575 1304 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 A0A0G2JS52 829 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 PHKG2P15735 406 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 MYT1Q01538 1121 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
LINC00555-201ENST00000569288 ZCRB1Q8TBF4 217 aaKnown RBP12.15□□□□□ -0.46
LINC00555-201ENST00000569288 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
LINC00555-201ENST00000569288 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
LINC00555-201ENST00000569288 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
LINC00555-201ENST00000569288 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 ITGB4P16144 1822 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 NHSQ6T4R5 1651 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
LINC00555-201ENST00000569288 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
LINC00555-201ENST00000569288 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
LINC00555-201ENST00000569288 RGPD3A6NKT7 1758 aaPredicted RBP12.14□□□□□ -0.47
LINC00555-201ENST00000569288 RGPD4Q7Z3J3 1758 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
LINC00555-201ENST00000569288 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
LINC00555-201ENST00000569288 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
LINC00555-201ENST00000569288 DZIP1LQ8IYY4 767 aaKnown RBP12.13□□□□□ -0.47
LINC00555-201ENST00000569288 SOCS7O14512 581 aa12.12□□□□□ -0.47
LINC00555-201ENST00000569288 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
LINC00555-201ENST00000569288 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
LINC00555-201ENST00000569288 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
LINC00555-201ENST00000569288 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
LINC00555-201ENST00000569288 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
LINC00555-201ENST00000569288 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
LINC00555-201ENST00000569288 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
LINC00555-201ENST00000569288 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
LINC00555-201ENST00000569288 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
LINC00555-201ENST00000569288 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
LINC00555-201ENST00000569288 BTAF1O14981 1849 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 CYP27B1O15528 508 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 PLIN1O60240 522 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
LINC00555-201ENST00000569288 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00555-201ENST00000569288 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 NOB1Q9ULX3 412 aaKnown RBP12.1□□□□□ -0.47
LINC00555-201ENST00000569288 TOGARAM1Q9Y4F4 1720 aa12.1□□□□□ -0.47
LINC00555-201ENST00000569288 CACNA1FO60840 1977 aa12.09□□□□□ -0.47
LINC00555-201ENST00000569288 TRIM27P14373 513 aa12.09□□□□□ -0.47
LINC00555-201ENST00000569288 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
LINC00555-201ENST00000569288 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
LINC00555-201ENST00000569288 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
LINC00555-201ENST00000569288 CRBNQ96SW2 442 aa12.09□□□□□ -0.47
LINC00555-201ENST00000569288 MRC1P22897 1456 aa12.08□□□□□ -0.47
LINC00555-201ENST00000569288 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
LINC00555-201ENST00000569288 ABCC4O15439 1325 aa12.08□□□□□ -0.48
LINC00555-201ENST00000569288 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
LINC00555-201ENST00000569288 LY75O60449 1722 aa12.07□□□□□ -0.48
LINC00555-201ENST00000569288 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
LINC00555-201ENST00000569288 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
LINC00555-201ENST00000569288 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
LINC00555-201ENST00000569288 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
LINC00555-201ENST00000569288 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
LINC00555-201ENST00000569288 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
LINC00555-201ENST00000569288 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
LINC00555-201ENST00000569288 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
LINC00555-201ENST00000569288 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
LINC00555-201ENST00000569288 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
LINC00555-201ENST00000569288 C20orf194Q5TEA3 1177 aa12.06□□□□□ -0.48
LINC00555-201ENST00000569288 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
LINC00555-201ENST00000569288 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
LINC00555-201ENST00000569288 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
LINC00555-201ENST00000569288 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
LINC00555-201ENST00000569288 PLSCR1O15162 318 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms