RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
SCAMP2-211ENST00000569251 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
SCAMP2-211ENST00000569251 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
SCAMP2-211ENST00000569251 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
SCAMP2-211ENST00000569251 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
SCAMP2-211ENST00000569251 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
SCAMP2-211ENST00000569251 ITPK1Q13572 414 aa17.54■□□□□ 0.4
SCAMP2-211ENST00000569251 KLHL34Q8N239 644 aa17.54■□□□□ 0.4
SCAMP2-211ENST00000569251 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
SCAMP2-211ENST00000569251 MTHFSP49914 203 aa17.53■□□□□ 0.4
SCAMP2-211ENST00000569251 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
SCAMP2-211ENST00000569251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.52■□□□□ 0.4
SCAMP2-211ENST00000569251 NLGN2Q8NFZ4 835 aa17.52■□□□□ 0.4
SCAMP2-211ENST00000569251 SSFA2P28290 1259 aa17.51■□□□□ 0.39
SCAMP2-211ENST00000569251 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
SCAMP2-211ENST00000569251 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
SCAMP2-211ENST00000569251 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
SCAMP2-211ENST00000569251 GPR162Q16538 588 aa17.5■□□□□ 0.39
SCAMP2-211ENST00000569251 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
SCAMP2-211ENST00000569251 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
SCAMP2-211ENST00000569251 PHF14O94880 888 aa17.49■□□□□ 0.39
SCAMP2-211ENST00000569251 CABP4P57796 275 aa17.49■□□□□ 0.39
SCAMP2-211ENST00000569251 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
SCAMP2-211ENST00000569251 C4AP0C0L4 1744 aa17.48■□□□□ 0.39
SCAMP2-211ENST00000569251 TJP1Q07157 1748 aa17.48■□□□□ 0.39
SCAMP2-211ENST00000569251 GNPATO15228 680 aa17.48■□□□□ 0.39
SCAMP2-211ENST00000569251 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
SCAMP2-211ENST00000569251 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
SCAMP2-211ENST00000569251 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
SCAMP2-211ENST00000569251 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
SCAMP2-211ENST00000569251 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
SCAMP2-211ENST00000569251 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.39
SCAMP2-211ENST00000569251 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-211ENST00000569251 HMOX1P09601 288 aa17.45■□□□□ 0.38
SCAMP2-211ENST00000569251 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
SCAMP2-211ENST00000569251 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-211ENST00000569251 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-211ENST00000569251 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
SCAMP2-211ENST00000569251 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
SCAMP2-211ENST00000569251 MRC1P22897 1456 aa17.44■□□□□ 0.38
SCAMP2-211ENST00000569251 YBX3P16989 372 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCAMP2-211ENST00000569251 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
SCAMP2-211ENST00000569251 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
SCAMP2-211ENST00000569251 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
SCAMP2-211ENST00000569251 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
SCAMP2-211ENST00000569251 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
SCAMP2-211ENST00000569251 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 SIPA1L3O60292 1781 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 N4BP2Q86UW6 1770 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 ADRA2BP18089 450 aa17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
SCAMP2-211ENST00000569251 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
SCAMP2-211ENST00000569251 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-211ENST00000569251 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-211ENST00000569251 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.38
SCAMP2-211ENST00000569251 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
SCAMP2-211ENST00000569251 MMP10P09238 476 aa17.38■□□□□ 0.37
SCAMP2-211ENST00000569251 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
SCAMP2-211ENST00000569251 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
SCAMP2-211ENST00000569251 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-211ENST00000569251 CEP350Q5VT06 3117 aa17.36■□□□□ 0.37
SCAMP2-211ENST00000569251 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
SCAMP2-211ENST00000569251 GYS1P13807 737 aa17.36■□□□□ 0.37
SCAMP2-211ENST00000569251 RFC4P35249 363 aa17.36■□□□□ 0.37
SCAMP2-211ENST00000569251 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
SCAMP2-211ENST00000569251 AFDNP55196 1824 aaKnown RBP17.34■□□□□ 0.37
SCAMP2-211ENST00000569251 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
SCAMP2-211ENST00000569251 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
SCAMP2-211ENST00000569251 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
SCAMP2-211ENST00000569251 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
SCAMP2-211ENST00000569251 C10orf71Q711Q0 1435 aa17.32■□□□□ 0.36
SCAMP2-211ENST00000569251 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
SCAMP2-211ENST00000569251 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 CYP19A1P11511 503 aaPredicted RBP17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
SCAMP2-211ENST00000569251 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SCAMP2-211ENST00000569251 TGFB2P61812 414 aa17.3■□□□□ 0.36
SCAMP2-211ENST00000569251 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
SCAMP2-211ENST00000569251 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
SCAMP2-211ENST00000569251 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
SCAMP2-211ENST00000569251 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
SCAMP2-211ENST00000569251 FKBP8Q14318 412 aa17.29■□□□□ 0.36
SCAMP2-211ENST00000569251 PHACTR3Q96KR7 559 aa17.29■□□□□ 0.36
SCAMP2-211ENST00000569251 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
SCAMP2-211ENST00000569251 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
SCAMP2-211ENST00000569251 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.36
SCAMP2-211ENST00000569251 TEFQ10587 303 aa17.27■□□□□ 0.36
SCAMP2-211ENST00000569251 NUDCQ9Y266 331 aa17.27■□□□□ 0.36
SCAMP2-211ENST00000569251 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
SCAMP2-211ENST00000569251 ADCY9O60503 1353 aa17.27■□□□□ 0.35
SCAMP2-211ENST00000569251 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
SCAMP2-211ENST00000569251 DDR1Q08345 913 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms